Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06088 and BL00237

See Amino acid alignment / Visit BSNT_06088 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence dna-align/BSNT_06088___fbaB.1.5803.seq
#    -bsequence dna-align/BL00237___fbaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06088___fbaB-BL00237___fbaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06088___fbaB-BL00237___fbaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06088___fbaB
# 2: BL00237___fbaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 899
# Identity:     655/899 (72.9%)
# Similarity:   655/899 (72.9%)
# Gaps:          46/899 ( 5.1%)
# Score: 2339.5
# 
#
#=======================================

BSNT_06088___      1 ATGGCTTTTGTATCGATGAAAGAGCTTCTTGAAGATGCAAAGCGGGAGCA     50
                     .|||||||.||.||.||||||||.||||||.||||.||||||....|.||
BL00237___fba      1 GTGGCTTTCGTTTCCATGAAAGAACTTCTTCAAGAAGCAAAGGAACATCA     50

BSNT_06088___     51 ATATGCAATTGGCCAGTTTAATATCAACGGCCTGCAATGGACGAAGGCGA    100
                     .||||||||.||.||.||||||||.||.|||||.||||||||.||.||||
BL00237___fba     51 TTATGCAATCGGTCAATTTAATATTAATGGCCTTCAATGGACAAAAGCGA    100

BSNT_06088___    101 TTTTGCAGGCGGCGCAAAAGGAGCAATCACCAGTCATCGCCGCGGCTTCC    150
                     ||.|..||||.|||.||.|.||.|..|||||.||||||||.||.|||||.
BL00237___fba    101 TTCTAGAGGCAGCGGAAGAAGAACGGTCACCTGTCATCGCAGCCGCTTCA    150

BSNT_06088___    151 GATCGCCTGGTCGACTATTTAGGCGGATTTAAAACGATTGCCGCCATGGT    200
                     |||||.||..||||.|||||.|||||||||||||||.||.||||.|||||
BL00237___fba    151 GATCGGCTCATCGATTATTTGGGCGGATTTAAAACGGTTTCCGCAATGGT    200

BSNT_06088___    201 CGGCGCGTTAATAGAGGACATGGCGATTACCGTTCCGGTCGTGCTTCATC    250
                     .|..||.||.||.|||||.|||.||||..|||||||.|||||||||||.|
BL00237___fba    201 TGCGGCTTTGATTGAGGAAATGTCGATCTCCGTTCCCGTCGTGCTTCACC    250

BSNT_06088___    251 TCGATCACGGCAGCAGTGCGGAACGCTGCAAACAGGCCATTGATGCCGGA    300
                     |.||.||.||||..|||.||||.||||||||.||.||.||.||.||.||.
BL00237___fba    251 TTGACCATGGCAAAAGTCCGGAGCGCTGCAAGCAAGCGATAGACGCGGGT    300

BSNT_06088___    301 TTCAGCTCAGTGATGATTGACGGCTCCCA-TCAGCCGATTGACGAGAATA    349
                     ||.||||||||.|||||.||||||||.|| ||| ||.||.||.||.||||
BL00237___fba    301 TTTAGCTCAGTCATGATCGACGGCTCGCATTCA-CCAATCGATGAAAATA    349

BSNT_06088___    350 TCGCGATGACAAAAGA-----AGTCACCGATTATG-------CCGCAAAA    387
                     ||||.|||||||||||     .||||     ||||       ||||||  
BL00237___fba    350 TCGCCATGACAAAAGAGGTCGTGTCA-----TATGCCGGGGTCCGCAA--    392

BSNT_06088___    388 CACGGCGTGTCAGTAGAAGCCGAAGTCGGCACGGTCGGCGGAATGGAAGA    437
                          .||.||.||.|||||.||.||.|||||.||.||.||.||||||||
BL00237___fba    393 -----TGTTTCGGTTGAAGCAGAGGTTGGCACCGTAGGGGGCATGGAAGA    437

BSNT_06088___    438 CGGACTGGTCGGCGGGGTCCGCTATGCGGATATCACGGAATGTGAGCGGA    487
                     |||.||..|||||||.||.|..|||||.||.|||...|||||.|||||||
BL00237___fba    438 CGGGCTTATCGGCGGAGTGCAGTATGCCGACATCGGTGAATGCGAGCGGA    487

BSNT_06088___    488 TCGTTAAAGAAACCAATATCGACGCGCTGGCCGCCGCCCTCGGCTCTGTA    537
                     |.||.|||||||||..||||||.||..||||.|||||.||||||||.||.
BL00237___fba    488 TTGTCAAAGAAACCGGTATCGATGCTTTGGCAGCCGCGCTCGGCTCCGTT    537

BSNT_06088___    538 CACGGCAAATATCAGGGTGAGCCGAATCTCGGATTTAAGGAAATGGAGGC    587
                     ||.||.||||||||.||.|||||.|||.|.|||||||||||||||||.|.
BL00237___fba    538 CATGGAAAATATCAAGGCGAGCCTAATTTGGGATTTAAGGAAATGGAAGA    587

BSNT_06088___    588 TATCTCCCGCATGACTGATATTCCCCTCGTTCTTCACGGGGCATCCGGGA    637
                     .|||||.||..|.||.||.|||||.||||||||.||.||.||.||.||.|
BL00237___fba    588 AATCTCACGGGTAACGGACATTCCGCTCGTTCTCCATGGAGCTTCGGGCA    637

BSNT_06088___    638 TTCCGCAGGATCAGATCAAAAAAGCTATCACG-CTCGGCCACGCGAAGAT    686
                     |.|||...|||||.|||..||.|.|.||| || ||.|||||.|||||.||
BL00237___fba    638 TCCCGGCTGATCAAATCGCAAGAACGATC-CGTCTGGGCCATGCGAAAAT    686

BSNT_06088___    687 CAATATCAATACGGAATGTATGGTAGCGTGGACAGACGAAACACGCCGCA    736
                     |||.||.|||||.|||||.|||||.||.|||||.||..||||.|||.|||
BL00237___fba    687 CAACATTAATACCGAATGCATGGTGGCCTGGACTGAGAAAACGCGCAGCA    736

BSNT_06088___    737 TGTTTCAGGAAAACAGCGATCTGTACGAACCGCGCGGCTATTTGACACCC    786
                     |.|||.|.||.||...||||.|.||.|||||.||||.||||.||||.||.
BL00237___fba    737 TATTTAAAGACAATCCCGATTTATATGAACCCCGCGCCTATATGACGCCA    786

BSNT_06088___    787 GGCATTGAAGCCGTGGAAGAGACAGTGCGAAGC--AAAATGAGAGAGTTC    834
                     ||.||....||.||..||||.||.||  .||.|  ||.||||||||.|||
BL00237___fba    787 GGGATCAGCGCAGTCAAAGAAACGGT--TAAACATAAGATGAGAGAATTC    834

BSNT_06088___    835 GGATCAGCCGGTAAAGCAGCTAAGCAGC----AGGTCGGCTAA------    873
                     ||.|||.||||.||||| |.||.|||.|    ||.|.|   ||      
BL00237___fba    835 GGGTCATCCGGAAAAGC-GGTATGCACCCAAAAGATAG---AAATATAA    879


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06088 and BL00237

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
