Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06064 and BL00216
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence dna-align/BSNT_06064___yxeI.1.5803.seq
# -bsequence dna-align/BL00216___yxeI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06064___yxeI-BL00216___yxeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06064___yxeI-BL00216___yxeI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06064___yxeI
# 2: BL00216___yxeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1044
# Identity: 705/1044 (67.5%)
# Similarity: 705/1044 (67.5%)
# Gaps: 111/1044 (10.6%)
# Score: 2120.5
#
#
#=======================================
BSNT_06064___ 1 ATGTGCACAAGTCTTACATTGGAAACTGCTGACCGGAATCATTTATTAGC 50
|||||.||||||.|.||.|||...|||||.|.||||.|.||||||||.||
BL00216___yxe 1 ATGTGTACAAGTATCACGTTGACGACTGCGGGCCGGGAGCATTTATTGGC 50
BSNT_06064___ 51 GAGAACAATGGATTTTGCATTTCAGCT----GGGGACGGAGGTCATTCTC 96
|||.||.||||||||||..|||.|||| || ||||||..|..|.
BL00216___yxe 51 GAGGACGATGGATTTTGATTTTGAGCTTAACGG----GGAGGTGCTGTTG 96
BSNT_06064___ 97 TATCCGCGCCGTTACAGTTGGAAGAGTGAAGCTGACGGAAAGGCCCAT-C 145
.|||||||.||.||||..|||||.||||||||.|||||.|..|..||| |
BL00216___yxe 97 CATCCGCGTCGCTACAAATGGAAAAGTGAAGCGGACGGCAGCGAGCATGC 146
BSNT_06064___ 146 AGACACAGTACGCGTTTATCGGTATGGGAAGAAAACTTGGTAATATTTTA 195
.|.| |.|||.|||||||||||.|||||.||||..||....|||..|.|.
BL00216___yxe 147 CGGC-CGGTATGCGTTTATCGGGATGGGCAGAAGGCTCAAGAATGCTCTG 195
BSNT_06064___ 196 TTTGCAGACGGCGTTAATGAAAACGGTTTATCGTGTGCTGCGCTTTATTT 245
|||||.||.||.||.||||||||.||.||.||.||.||.|||||||||||
BL00216___yxe 196 TTTGCCGATGGTGTGAATGAAAAAGGATTGTCTTGCGCGGCGCTTTATTT 245
BSNT_06064___ 246 TCCGGGCTATGCGGAGTACGAAA-------AAACGATACGGGAAGATACC 288
.|||||||||||.|.|||.|||| |||.|| |..||| ||
BL00216___yxe 246 CCCGGGCTATGCTGTGTATGAAAACGAAGCAAAAGA---GCAAAG---CC 289
BSNT_06064___ 289 GTTCACA---TTGCCCCGCATGAGTTTGTGACATGGGTGCTGTCAGTCTG 335
| || ||||.|||||.||.||.|||||||||||||||||.|..||
BL00216___yxe 290 G----CAATCTTGCGCCGCACGAATTCGTGACATGGGTGCTGTCGGAATG 335
BSNT_06064___ 336 TCAGTC--TTTGGAAGACGTAAAAGAAAA------GATTCGATCTTTAAC 377
.|.| ||||||.||.||.|| |||| |.||| |||.|||
BL00216___yxe 336 --CGGCGATTTGGAGGATGTGAA--AAAAGCGGCTGTTTC---CTTAAAC 378
BSNT_06064___ 378 GATTGTAGAGAAAAAATTAGATCTA--TTG--GA-TACAGTTTTACCGCT 422
|||||.||||.| .||.|| | ||| || |||.||....|||||
BL00216___yxe 379 -ATTGTTGAGAGA----GAGGTC-AGCTTGCTGAGTACGGTGACGCCGCT 422
BSNT_06064___ 423 TCACTGGATATTGTCAGACCGGAC--GGGCCGAAGCCTGACG--ATAGAA 468
.||.|||.||||..|.|||||..| |||| |||| |.|| .|.|||
BL00216___yxe 423 GCATTGGCTATTAACGGACCGCTCCGGGGC--AAGC--GTCGTTGTTGAA 468
BSNT_06064___ 469 CCGAGAGCAGACGGC-CTCAAAGTCTATGATAATCAACCTGGT----GTC 513
||||..||||||||| .|||||.|| |||||||| |.||| ||.
BL00216___yxe 469 CCGACGGCAGACGGCATTCAAATTC-ATGATAAT----CCGGTCGGCGTG 513
BSNT_06064___ 514 ATGACGAACAGCCCCGACTTTATATGGCATGTAACCAATCTGCAGCAA-- 561
.||||||||||.||.||.||....||||||.|.||||||.||| ||||
BL00216___yxe 514 CTGACGAACAGTCCGGATTTCCCTTGGCATTTGACCAATTTGC-GCAACT 562
BSNT_06064___ 562 -TATACAGGAATCAGACCGAAGCAATTAGAGAGC-AAAGAGATGGGCGGA 609
||| |.|...|||| |||...||.||.| ..|| |||.|.|||||.||.
BL00216___yxe 563 TTAT-CGGTCTTCAG-CCGGGACAGTTTG-CCGCGAAAAAAATGGGAGGC 609
BSNT_06064___ 610 TTAGCCCTTTCCGCTTTTGGCCAAGGCTTAGGAACTGT-TGGTCTGCCGG 658
.|..|.||.||.||||||||.||||| ||..|..|||| .||..||||.|
BL00216___yxe 610 CTGACGCTGTCGGCTTTTGGTCAAGG-TTCCGGGCTGTCCGGATTGCCAG 658
BSNT_06064___ 659 GGGATTATACACCGCCTTCCCGGTTTGTCAGAGCTGTTTATTTGAAAGAA 708
|.||||.|||.|||||.|||||.||||||||.||||..|.|||||||||.
BL00216___yxe 659 GAGATTTTACGCCGCCATCCCGCTTTGTCAGGGCTGCATTTTTGAAAGAG 708
BSNT_06064___ 709 CATCTAGAGCCAGCGGCCGATGAAACGAAAGGTGTAACGGCCGCTTTTCA 758
||..|..||||.|.|.||||||||||..||||.||..|.|||||.|||||
BL00216___yxe 709 CACATGAAGCCTGTGTCCGATGAAACAGAAGGCGTCTCTGCCGCGTTTCA 758
BSNT_06064___ 759 AATTTTGGCAAATATGACGATACC-AAAGGGCGCAGTGATAACGGAAGAA 807
..|..|..|.|||||||..||.|| |||||| |..||.||.||.||..||
BL00216___yxe 759 TGTCCTCTCCAATATGAATATTCCTAAAGGG-GTTGTTATGACTGATCAA 807
BSNT_06064___ 808 GACGAAATTCATTATACGCAATATACTTCCGTGATGTGCAACGAAACTGG 857
|.||||....||||.||.||||||||..|.||.|||||||.|||.||..|
BL00216___yxe 808 GGCGAAGACGATTACACCCAATATACGGCGGTAATGTGCAGCGAGACGTG 857
BSNT_06064___ 858 AAACTACTATTTCCACCACTATGACAATCGGCAAATCCAAAAAGTAAATT 907
.|.|||||||||.|||||.|||.|.||..||||.||.|||||.||....|
BL00216___yxe 858 CAGCTACTATTTTCACCATTATCAAAACAGGCAGATTCAAAAGGTTTGCT 907
BSNT_06064___ 908 TATTTCATGAAGACCTTGACTGTTTGGAGC------CTAAAGTGTTTTCC 951
||||.||.||||||||.||| ||| .|||||...||||.
BL00216___yxe 908 TATTACAGGAAGACCTGGAC-------AGCAACGAATTAAAGGCGTTTCA 950
BSNT_06064___ 952 GCTAAAGCA-GAAGAGA--GT--ATTCTAGAACTT-AAT--TAA 987
||.|||||| ||||||| || ||||| ||| ||| |||
BL00216___yxe 951 GCCAAAGCAGGAAGAGACGGTTCATTCT----CTTCAATCATAA 990
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