Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04427 and BL00209

See Amino acid alignment / Visit BSNT_04427 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence dna-align/BSNT_04427___ytsC.1.5803.seq
#    -bsequence dna-align/BL00209___bceA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04427___ytsC-BL00209___bceA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04427___ytsC-BL00209___bceA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04427___ytsC
# 2: BL00209___bceA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity:     620/762 (81.4%)
# Similarity:   620/762 (81.4%)
# Gaps:           0/762 ( 0.0%)
# Score: 2532.0
# 
#
#=======================================

BSNT_04427___      1 ATGGTGATTTTAGAAGCGAATAAAATTCGAAAAAGTTATGGAAACAAGCT     50
                     |||.||||||||||||||||.|||||.||||||||.||||||||.||||.
BL00209___bce      1 ATGATGATTTTAGAAGCGAAAAAAATACGAAAAAGCTATGGAAATAAGCA     50

BSNT_04427___     51 GAATAAACAGGAAGTGCTGAAGGGCATCGATATTCACATTGAAAAGGGCG    100
                     .||||||||.||||||.|.|||||.|||||..||||.|||.|||||||.|
BL00209___bce     51 CAATAAACACGAAGTGTTAAAGGGAATCGACCTTCAGATTCAAAAGGGGG    100

BSNT_04427___    101 AATTCGTCAGTATTATGGGGGCTTCCGGGTCGGGAAAAACCACTTTGCTC    150
                     ||||.||||||||||||||..|.||.||.||.||.|||||.||.||||||
BL00209___bce    101 AATTTGTCAGTATTATGGGCCCGTCTGGTTCAGGCAAAACAACATTGCTC    150

BSNT_04427___    151 AACGTTCTGTCCTCAATCGATCAGGTCAGTCACGGAACCATTCATATTAA    200
                     ||.|||||||||||.||.||.|||||.||...||||||.|||.|.||.||
BL00209___bce    151 AATGTTCTGTCCTCTATTGACCAGGTGAGCGGCGGAACGATTAACATCAA    200

BSNT_04427___    201 TGGAAATGACATGACGGCTATGAAGGAAAAGCAGCTGGCTGAATTTAGAA    250
                     ...|..|||.||||||..||||||||||||.|||||.||.||.||.||.|
BL00209___bce    201 CCAAGCTGAGATGACGAATATGAAGGAAAAACAGCTTGCCGAGTTCAGGA    250

BSNT_04427___    251 AACAGCATTTAGGCTTTATCTTTCAGGATTACAATTTGTTAGACACATTG    300
                     |.|||||||||||.||||||||.||.||.|||||||||.|.||.||..||
BL00209___bce    251 AGCAGCATTTAGGATTTATCTTCCAAGAATACAATTTGCTCGATACGCTG    300

BSNT_04427___    301 ACAGTGAAAGAGAATATCCTTCTGCCTTTATCGATCACGAAACTATCAAA    350
                     |||||||||||.||||||||||||||..|.|||||.||||||.|||||||
BL00209___bce    301 ACAGTGAAAGAAAATATCCTTCTGCCGCTGTCGATTACGAAAATATCAAA    350

BSNT_04427___    351 AAAGGAAGCCAATCGCAAGTTTGAGGAAGTTGCAAAGGAACTGGGAATAT    400
                     |||.||||||..||..||||||||||||||.||.||.|||.|.||.||.|
BL00209___bce    351 AAAAGAAGCCGGTCAAAAGTTTGAGGAAGTCGCGAAAGAATTAGGCATCT    400

BSNT_04427___    401 ATGAATTGCGGGATAAGTACCCGAATGAAATTTCCGGCGGCCAGAAGCAG    450
                     ..||..||..||||||.||.|||||||||||||||||.||.||.||.|||
BL00209___bce    401 TCGAGCTGAAGGATAAATATCCGAATGAAATTTCCGGGGGGCAAAAACAG    450

BSNT_04427___    451 AGAACATCCGCTGGAAGAGCGTTTATTCATGACCCGAGCATTATTTTCGC    500
                     .|.|||||.||.|..||.||||||||||||||.|||||||||||||||||
BL00209___bce    451 CGCACATCAGCAGCCAGGGCGTTTATTCATGAGCCGAGCATTATTTTCGC    500

BSNT_04427___    501 TGATGAACCGACCGGCGCGCTCGATTCGAAATCGGCCTCCGATCTATTAA    550
                     |||.|||||||||||.|||||.|||||||||||.||.||.||..|.||||
BL00209___bce    501 TGACGAACCGACCGGTGCGCTTGATTCGAAATCCGCATCAGACTTGTTAA    550

BSNT_04427___    551 ATAAGCTGAGCCAGCTCAATCAAAAACGCAACGCGACGATTATTATGGTT    600
                     |.|||||||||||..|.||||||||.|||...||.||.||..||||||||
BL00209___bce    551 ACAAGCTGAGCCAATTAAATCAAAAGCGCCGGGCCACAATCGTTATGGTT    600

BSNT_04427___    601 ACCCATGATCCCGTCGCTGCCAGCTACTGCGGCAGAGTCATTTTTATTAA    650
                     |||||||||||||||||.||.||||.||||.|||||||..||||.|||||
BL00209___bce    601 ACCCATGATCCCGTCGCCGCGAGCTTCTGCAGCAGAGTGGTTTTCATTAA    650

BSNT_04427___    651 GGACGGGCAAATGTATACACAGCTGAATAAAGGGGGCCAGGACAGGCAAA    700
                     .|||||.|||||.|||||.||||||||||||||.||.|||||||||||.|
BL00209___bce    651 AGACGGACAAATTTATACGCAGCTGAATAAAGGCGGACAGGACAGGCAGA    700

BSNT_04427___    701 CGTTTTTCCAGGATATTATGAAAACGCAAGGCGTGTTAGGCGGGGTGCAG    750
                     .|||.||||||||.||.|||||.|||||||||||||||||||||||.|||
BL00209___bce    701 TGTTCTTCCAGGACATCATGAAGACGCAAGGCGTGTTAGGCGGGGTTCAG    750

BSNT_04427___    751 CATGAACATTAA    762
                     |||||.||||||
BL00209___bce    751 CATGAGCATTAA    762


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