Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06146 and BL00200

See Amino acid alignment / Visit BSNT_06146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence dna-align/BSNT_06146___ahpC.1.5803.seq
#    -bsequence dna-align/BL00200___ahpC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06146___ahpC-BL00200___ahpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06146___ahpC-BL00200___ahpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06146___ahpC
# 2: BL00200___ahpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity:     492/564 (87.2%)
# Similarity:   492/564 (87.2%)
# Gaps:           0/564 ( 0.0%)
# Score: 2172.0
# 
#
#=======================================

BSNT_06146___      1 ATGTCTTTAATCGGTAAAGAAGTACTTCCATTCGAAGCAAAAGCATTCAA     50
                     ||||||.|||||||.||||||||||..|||||||.|||||||||.|.|||
BL00200___ahp      1 ATGTCTCTAATCGGAAAAGAAGTACAACCATTCGCAGCAAAAGCTTACAA     50

BSNT_06146___     51 AAACGGTGAATTCATCGATGTAACAAACGAAGATTTGAAAGGCCAATGGA    100
                     |||||||||.||.||||||||.|||.||||||||.|||||||||||||||
BL00200___ahp     51 AAACGGTGAGTTTATCGATGTTACACACGAAGATCTGAAAGGCCAATGGA    100

BSNT_06146___    101 GCGTATTCTGCTTCTACCCAGCAGATTTCTCTTTCGTATGCCCAACTGAG    150
                     ||.|.|||||||||||.|||||.||||||||.||.||.|||||.||||||
BL00200___ahp    101 GCATTTTCTGCTTCTATCCAGCGGATTTCTCATTTGTTTGCCCGACTGAG    150

BSNT_06146___    151 CTTGAAGATCTTCAAGAACAATATGCTGCTCTTAAAGAATTAGGTGTTGA    200
                     ||||||||.||||||.|.||.||.|..|||||.||||||.|||||||.||
BL00200___ahp    151 CTTGAAGACCTTCAAAACCACTACGAAGCTCTAAAAGAACTAGGTGTCGA    200

BSNT_06146___    201 AGTCTACTCTGTTTCTACAGATACTCACTTCGTACACAAAGGCTGGCATG    250
                     |||.||||||||||||||||||||||||||||||||.|||||.|||||||
BL00200___ahp    201 AGTATACTCTGTTTCTACAGATACTCACTTCGTACATAAAGGATGGCATG    250

BSNT_06146___    251 ACAGCTCTGAAAAAATCAGCAAAATCACTTACGCAATGATCGGCGACCCA    300
                     ||||||||||.||||||.||||||||||||||||.|||||||||||||||
BL00200___ahp    251 ACAGCTCTGAGAAAATCGGCAAAATCACTTACGCGATGATCGGCGACCCA    300

BSNT_06146___    301 TCTCAAACGATCTCTCGCAACTTCGATGTTCTTGACGAAGAAACTGGCCT    350
                     ||||||||||||||.|||||.||.||.||.||..||||||||...||.||
BL00200___ahp    301 TCTCAAACGATCTCCCGCAATTTTGAAGTGCTGAACGAAGAAGAAGGTCT    350

BSNT_06146___    351 TGCTGACCGCGGAACATTCATCATCGATCCAGATGGCGTTATCCAAACTG    400
                     ||||||||||||||||||||||||||||||.||.|||||.||||||.|||
BL00200___ahp    351 TGCTGACCGCGGAACATTCATCATCGATCCGGACGGCGTCATCCAAGCTG    400

BSNT_06146___    401 TTGAAATTAATGCAGGCGGTATCGGCCGTGACGCAAGCAACCTTGTAAAC    450
                     |||||||.||.||||||||||||||||||||.||.||||.|||..|.|||
BL00200___ahp    401 TTGAAATCAACGCAGGCGGTATCGGCCGTGATGCGAGCATCCTGATCAAC    450

BSNT_06146___    451 AAAGTAAAAGCAGCTCAATACGTTCGTCAAAACCCAGGTGAAGTTTGCCC    500
                     |||||||||||.|||||||||||.||.|||||||||||.|||||||||||
BL00200___ahp    451 AAAGTAAAAGCGGCTCAATACGTACGCCAAAACCCAGGCGAAGTTTGCCC    500

BSNT_06146___    501 GGCTAAATGGGAAGAAGGCGGCGAAACTCTTACACCTAGCCTTGATCTAG    550
                     ||||||||||||||||||....|||||.||.|||||.||||||||.||||
BL00200___ahp    501 GGCTAAATGGGAAGAAGGTTCTGAAACACTGACACCAAGCCTTGACCTAG    550

BSNT_06146___    551 TAGGTAAAATCTAA    564
                     ||||.|||||||||
BL00200___ahp    551 TAGGCAAAATCTAA    564


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