Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06144 and BL00197
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_06144___gntP.1.5803.seq
# -bsequence dna-align/BL00197___gntP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06144___gntP-BL00197___gntP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06144___gntP-BL00197___gntP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06144___gntP
# 2: BL00197___gntP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity: 1054/1353 (77.9%)
# Similarity: 1054/1353 (77.9%)
# Gaps: 12/1353 ( 0.9%)
# Score: 4040.0
#
#
#=======================================
BSNT_06144___ 1 ATGCCGTTAATCATCGTTGCACTTGGGATCTTAGCATTACTATTTCTGAT 50
|||||.|||.|.|||||.|||.|.|||||..|.||||||.|..||.||||
BL00197___gnt 1 ATGCCATTATTAATCGTAGCAATCGGGATTGTCGCATTATTGCTTTTGAT 50
BSNT_06144___ 51 TATGGGCTTAAAATTAAACACATTTATTTCCCTGCTGGTCGTATCGTTCG 100
||||||.||||||.|.||.||.|||.|||||.||.|..||||||||||||
BL00197___gnt 51 TATGGGGTTAAAACTGAATACGTTTGTTTCCTTGATTATCGTATCGTTCG 100
BSNT_06144___ 101 GCGTGGCACTGGCACTCGGGATGCCGTTCGATAAAGTTGTCAGCTCCATC 150
|.||.|||.|||||||.||.||||||||.||..|..|.||||...|.||.
BL00197___gnt 101 GTGTTGCATTGGCACTTGGAATGCCGTTTGACGACATCGTCAAAACGATT 150
BSNT_06144___ 151 GAAGCAGGAATAGGGGGGACTCTTGGCCACATCGCGCTCATCTTCGGACT 200
|||..|||..|.||.||.||.||.|||||.|||||..|.||||||||.||
BL00197___gnt 151 GAACAAGGCCTTGGCGGAACGCTCGGCCATATCGCATTGATCTTCGGGCT 200
BSNT_06144___ 201 CGGTGCGATGCTGGGCAAGCTGATCGCGGATTCAGGAGGCGCACAGCGCA 250
|||.||.|||||||||||||||||||||||||||||.|||||.|||||||
BL00197___gnt 201 CGGCGCCATGCTGGGCAAGCTGATCGCGGATTCAGGGGGCGCTCAGCGCA 250
BSNT_06144___ 251 TTGCGATGACGCTCGTCAACAAATTCGGTGAGAAAAATATTCAATGGGCC 300
||||||||||.|||||||||||||||||.||||||||.||.||||||||.
BL00197___gnt 251 TTGCGATGACCCTCGTCAACAAATTCGGGGAGAAAAACATCCAATGGGCG 300
BSNT_06144___ 301 GTTGTCATTGCCTCATTTATTATTGGGATTGCGTTATTTTTTGAAGTAGG 350
||.|||||.|||||.|||||.||.|||.||||.|||||.||.|||||.||
BL00197___gnt 301 GTCGTCATCGCCTCCTTTATCATCGGGGTTGCTTTATTCTTCGAAGTCGG 350
BSNT_06144___ 351 ACTGGTTCTATTAATTCCGATTGTCTTTGCGATTTCAAGAGAATTGAAGA 400
|.|||||.||||.|||||.|||||.||.||.|||||||||||||||||||
BL00197___gnt 351 ATTGGTTTTATTGATTCCAATTGTATTCGCAATTTCAAGAGAATTGAAGA 400
BSNT_06144___ 401 TTTCTATTTTATTTCTCGGAATCCCGATGGTCGCGGCACTATCCGTCACA 450
||||||||||||..||||||||.||||||...|||||..|||||||||||
BL00197___gnt 401 TTTCTATTTTATACCTCGGAATTCCGATGACGGCGGCCTTATCCGTCACA 450
BSNT_06144___ 451 CACGGTTTCCTGCCGCCGCACCCGGGACCTACGGCGATCGCCGGTGAGTA 500
|||||.||||||||.|||||.||||||||.|||||.|||||.||.||...
BL00197___gnt 451 CACGGCTTCCTGCCTCCGCATCCGGGACCGACGGCTATCGCGGGAGAACT 500
BSNT_06144___ 501 TGGCGCAAACATTGGAGAAGTGCTGCTGTACGGCTTTATCGTTGCTGTTC 550
.|||||.||.||.||.|||||||||||.|||||..|.||.|||||..|||
BL00197___gnt 501 CGGCGCCAATATCGGGGAAGTGCTGCTCTACGGTATCATTGTTGCAATTC 550
BSNT_06144___ 551 CGACAGTGCTCATTGCAGGGCCGTTATTTACAAAGTTCGCGAAAAAAATC 600
|.||.||.||..|.||.||.||.||||||||.||..|.||||||||||||
BL00197___gnt 551 CAACCGTTCTTTTGGCCGGACCTTTATTTACGAAACTGGCGAAAAAAATC 600
BSNT_06144___ 601 GTTCCTGC-ATCATTTGCGAAAAACGGCAATATTGCATCACTCGGCACAC 649
||.|| || ||||||||.|||||..||||..||.||.||||||||...||
BL00197___gnt 601 GTACC-GCAATCATTTGAGAAAATGGGCAGCATCGCTTCACTCGGTGAAC 649
BSNT_06144___ 650 AAAAAACGTTTAACCTTGAAGAAACACCCGGCTTTGGAATCAGTGTCTTT 699
|.||||||||.||.||||||||.||.||.|.||||||.|||||.|||||.
BL00197___gnt 650 AGAAAACGTTCAAGCTTGAAGAGACGCCAGCCTTTGGCATCAGCGTCTTC 699
BSNT_06144___ 700 ACCGCAATGCTCCCGATTATCATCATGTCGGTCGCGACCATTATCGAC-C 748
||.||.|||||.||..|.||.|||||||||.|..||||.||||| .|| |
BL00197___gnt 700 ACAGCTATGCTTCCAGTCATTATCATGTCGATTTCGACTATTAT-TACTC 748
BSNT_06144___ 749 TGCTTCAAGAAACAATCGGGTTTGCAGATAACGGAGTTT--TAGCTTTTA 796
|..|||||||||||||.||..|||||||.||| ||.|| |.||....|
BL00197___gnt 749 TCATTCAAGAAACAATGGGACTTGCAGACAAC--AGCTTCCTGGCAGCGA 796
BSNT_06144___ 797 TCAGATTGATTGGAAACGCATCGACTGCTATGATTATTTCGTTATTGGTC 846
|..|.||.||.||.||.||.||||||.|.|||.|.||.||..|.|||.||
BL00197___gnt 797 TTCGTTTAATCGGGAATGCCTCGACTTCGATGGTCATCTCCCTGTTGTTC 846
BSNT_06144___ 847 GCAGTCTATACAATGGGCATCAAGC--GCAACATTCCAGTCAAAACCGTG 894
||..|.|||||.|||||.||| || |.||.||.||..|||||...|||
BL00197___gnt 847 GCGATTTATACGATGGGTATC--GCCAGAAAGATCCCGATCAAACAAGTG 894
BSNT_06144___ 895 ATGGATTCTTGTTCAACTGCCATTTCACAAATCGGCATGATGCTTTTGAT 944
||||||||.||||||||.||||||.|.||||||||.||||||||.|||||
BL00197___gnt 895 ATGGATTCCTGTTCAACCGCCATTACTCAAATCGGAATGATGCTCTTGAT 944
BSNT_06144___ 945 CATCGGAGGAGGCGGCGCCTTCAAACAAGTGCTGATCAACGGCGGTGTCG 994
||||||.||.||||||||.|||||||||||..|||||||||||||.||.|
BL00197___gnt 945 CATCGGGGGCGGCGGCGCATTCAAACAAGTCTTGATCAACGGCGGAGTAG 994
BSNT_06144___ 995 GCGATTACGTAGCAGACTTATTCAAAGGAACGGCATTATCGCCAATCATT 1044
||||.||.|||||.||.|||||||||||||||||..|.|||||.|||.|.
BL00197___gnt 995 GCGACTATGTAGCTGAATTATTCAAAGGAACGGCCATGTCGCCGATCTTG 1044
BSNT_06144___ 1045 CTGGCATGGCTCATCGCGGCGATCCTGCGCATTTCTCTAGGATCAGCGAC 1094
||.||.|||.||||.||.|||||.|||||.||.|||.||||.||.|||||
BL00197___gnt 1045 CTCGCCTGGGTCATTGCCGCGATTCTGCGAATCTCTTTAGGTTCCGCGAC 1094
BSNT_06144___ 1095 TGTTGCCGCACTAAGCACAACAGGTCTGGTCATCCCGTTATTGGGCCATT 1144
.|||||.|||.|||||||.||.||.||.||..|.|||.|..|.||.||..
BL00197___gnt 1095 AGTTGCTGCATTAAGCACGACCGGACTCGTTCTTCCGATGCTCGGACAAA 1144
BSNT_06144___ 1145 CTGATGTTAACCTGGCGTTAGTCGTGCTCGCAACAGGCGCCGGAAGTGTC 1194
..|||||.||.||.||..|.||.|||||.||||||||.||.||||||||.
BL00197___gnt 1145 GCGATGTCAATCTTGCACTGGTTGTGCTTGCAACAGGGGCAGGAAGTGTA 1194
BSNT_06144___ 1195 ATCGCTTCACACGTCAATGACGCCGGCTTCTGGATGTTCAAGGAATACTT 1244
||||||||.||.|||||.|||||.|||||||||||||||||.||.||.||
BL00197___gnt 1195 ATCGCTTCCCATGTCAACGACGCGGGCTTCTGGATGTTCAAAGAGTATTT 1244
BSNT_06144___ 1245 CGGATTAAGCATGAAAGAAACATTCGCCACATGGACATTGCTGGAAACCA 1294
|||..|.|||||||||||||||||||||||.||||||.||||.|||||.|
BL00197___gnt 1245 CGGCCTGAGCATGAAAGAAACATTCGCCACCTGGACACTGCTTGAAACAA 1294
BSNT_06144___ 1295 TTATTTCCGTTGCTGGACTGGGATTCATTTTATTGTTAAGTTTAGTTGTA 1344
||||..|.||.||.|||.|.|||||.|.|||||||||||||.||.|||||
BL00197___gnt 1295 TTATCGCGGTGGCCGGATTAGGATTTACTTTATTGTTAAGTCTATTTGTA 1344
BSNT_06144___ 1345 TGA 1347
|.|
BL00197___gnt 1345 TAA 1347
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