Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05842 and BL00193
See
Amino acid alignment /
Visit
BSNT_05842 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_05842___galT.1.5803.seq
# -bsequence dna-align/BL00193___galT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05842___galT-BL00193___galT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05842___galT-BL00193___galT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05842___galT
# 2: BL00193___galT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1753
# Identity: 955/1753 (54.5%)
# Similarity: 955/1753 (54.5%)
# Gaps: 476/1753 (27.2%)
# Score: 2305.0
#
#
#=======================================
BSNT_05842___ 1 ATGAGTATTATTGAACA--------------TC--TGGAACAGCTGCTTG 34
||.|||||||| || |..||.||| |||||
BL00193___gal 1 ------ATGATTGAACAAGACATAGCCGGACTCATTCAAAAAGC-GCTTG 43
BSNT_05842___ 35 -AGTATGGCCTGGAACGAAAATTGATTTCGATCTGG--GATCGGGAA-TA 80
||.|.|| || |.||||.|.|| || ||.||| ||
BL00193___gal 44 AAGCAGGG-------------TT--TATCGAACCGGCTGA-CGTGAACTA 77
BSNT_05842___ 81 TACGAGAAACC--GTCTTTATGAAGC-GCTGGGC-----ATCACACATCC 122
..||.|.|||| | |.|||||.| ||||||| || |...|||
BL00193___gal 78 CGCGCGCAACCAAG---TGATGAATCTGCTGGGCTTGGAAT--CGTTTCC 122
BSNT_05842___ 123 CGAG----------------CCG--GTCTCCAGCACCAGCATCAAGCAGT 154
.||| ||| |.|||||.| ||||
BL00193___gal 123 TGAGGAAGCCACTGCTGCTTCCGGCGACTCCATC-CCAG----------- 160
BSNT_05842___ 155 CAC--------AAAGCCTGCCGGACTTGCTAGCTCCCATCTATAAATGGG 196
|| ||| |||.|| ||| |||| |
BL00193___gal 161 -ACCTTTTGGAAAA---------ACTCGC-AGC------CTAT------G 187
BSNT_05842___ 197 CTGCGGAAACCGGCCGAATGGAAGCG--GATACAGATACGTACCGTGACC 244
|.|..|||..||||...|| ||.|| |||..|||..||.| .|||.
BL00193___gal 188 CAGTCGAACACGGCGTGAT--AACCGACGATCTAGACGCGAA---AGACA 232
BSNT_05842___ 245 TGCTCAGC-GCAAAGCTGATGGGCTGTTTTGTGCCTGC---CCCGTCCGA 290
|||| .|| |||||..|||||..|||.||||| ||| .||.||
BL00193___gal 233 TGCT-GGCGGCAAATGTGATGAACTGCTTTGT---TGCAAGACCTTC--- 275
BSNT_05842___ 291 GGTCATTCGCAAATTTGAAG------AGACAAAAGCATTATACGGCCCAA 334
.||||| ||| ||.|| || ||.|| |||||
BL00193___gal 276 TGTCAT---CAA---TGCAGTGTTCCAG-CAGAA-----ATACG------ 307
BSNT_05842___ 335 AACA---------GGCGACAAAGGAA---TTCTATCA-------ATATTC 365
|||| |||..|.|..||| ||.||||| |.|..|
BL00193___gal 308 AACAATCGCCGCTGGCAGCCACCGAATATTTTTATCAGCTCAGCAAAAAC 357
BSNT_05842___ 366 AGAGGATGTCTATTATATACGGACTGACAGAATTGCCAAAAATGTT---C 412
|| |.|.|||||.|.|||..|..||||||..||||||.|| .
BL00193___gal 358 AG-------CAACTATATCCAGACGAAGCGAATTGAAAAAAATATTTCGT 400
BSNT_05842___ 413 ATTGGACGGTGCCGACCGAATATGGCGAGCTGGAAATGACCATTAACCTA 462
||..||.||...||.| .||.|||....||||.||.||.||.||..|.
BL00193___gal 401 ATCAGATGGATACGCC---TTACGGCACAATGGATATTACGATCAATTTG 447
BSNT_05842___ 463 TCAAAGCCTGAAAAGGACCC-GAA-------------AGCGATTGCGGCT 498
||||||||.|||||.||||| ||| |||| .||.|||
BL00193___gal 448 TCAAAGCCGGAAAAAGACCCTGAACAAATCAAACGGGAGCG--CGCCGCT 495
BSNT_05842___ 499 GCAAAA-----GAGCAGGAACAGACAAATTATCCGATGTGTTTGCTGTGT 543
|||||| |.|||| .|||||||||||..|||||||.
BL00193___gal 496 GCAAAACAATCGCGCAG-----------CTATCCGATGTGCCTGCTGTGC 534
BSNT_05842___ 544 AAAGAAAATGTCGGCTTCGAGGG--AAGCG---TGAATC----ATCCAGC 584
|||||||| |||||| |.||| .||||| ||||.||
BL00193___gal 535 AAAGAAAA---------CGAGGGGTATGCGGGACGAATCGGGTATCCTGC 575
BSNT_05842___ 585 CCGGCAAAATCACAGAATCATT------CCGGTCATCCTTGAGGACGAAC 628
||||..|||.|||||.||.||| |||.||..| ||| |||.
BL00193___gal 576 CCGGGCAAACCACAGGATTATTAAAGTCCCGCTCGCC-----GGA-GAAA 619
BSNT_05842___ 629 AATGGTTCCTGCAATTCTCGCCATATGTCTATTATCCGGAGCACTGC--- 675
|.||||...|.||||..||.|||||||..||.|||...||.|||.||
BL00193___gal 620 ACTGGTATTTTCAATATTCTCCATATGCTTACTATAACGAACACAGCATT 669
BSNT_05842___ 676 --ATTGTCTTAAAAGGTGAACATGAACCGATGGA----GATCAGCAAAAA 719
|||.|||.|..|| |||...||||||.| |||.||| .
BL00193___gal 670 TTATTTTCTGAGCAG-----CATCGGCCGATGAAAATTGATAAGC----T 710
BSNT_05842___ 720 AACATTTGGAAGGCTGCTGGCATTTCTTGGCCAATATCCGCATTATTTTA 769
..|.|||...||||||||.||.|||..||..|..|.||||||||||||||
BL00193___gal 711 TGCCTTTCACAGGCTGCTTGCTTTTACTGAGCTGTTTCCGCATTATTTTA 760
BSNT_05842___ 770 TCGGTTCAAACGCGGATCTGCCGATTGTCGGCGGCAGCATCCTAAGCCAT 819
||||.||.||.||.|||.|||||||.||||||||....||..||||||||
BL00193___gal 761 TCGGATCGAATGCCGATTTGCCGATCGTCGGCGGGTCTATTTTAAGCCAT 810
BSNT_05842___ 820 GATCATT-TCCAAGGCGGCGCG-CATGATTTTCCAATGGCACGTGCAGAA 867
||.|||| || ||||.|..|| .||||.|||.|.||| |||.||
BL00193___gal 811 GACCATTATC--AGGCCGGACGATATGAGTTTGCGATG--ACGCGC---- 852
BSNT_05842___ 868 GCGGAAG--ACGTT----TATGAATTAAATGATTATCCCGGCGT-GTCGC 910
||||||| .|||| |.|.||.|.||..|..||||.|.|.| |..||
BL00193___gal 853 GCGGAAGGCGCGTTCTCCTTTCAAATCAAACAGCATCCGGCCATCGAAGC 902
BSNT_05842___ 911 T--GGGCTTAGTGAAGTGGCCGATGTCTGTGCTCAGGCTCCAAGGA---- 954
| .|..||| ||.|||||||||||.||..||.|..|..|||||
BL00193___gal 903 TTCCGTTTTA---AAATGGCCGATGTCCGTCATCCGCTTGAAAGGAACTG 949
BSNT_05842___ 955 -GACGAACCGGGTCATGTCGCCGAAGCTGCTGACCATATCTTCCGCACGT 1003
||..||| .|.|.||| .|||||.||.||||||||.||.|..||.|
BL00193___gal 950 CGATCAAC--AGCCTTGT---TGAAGCGGCGGACCATATTTTTCAGACTT 994
BSNT_05842___ 1004 GGCAGACGTATTCCGATGAAAAAGCCGGCATTGCCGCCTATACAGGCGAT 1053
||.|.|..||.||.|||.||.||||.|..||..|.||.|.|||||..|..
BL00193___gal 995 GGAAAAACTACTCGGATCAACAAGCGGATATCTCGGCTTTTACAGATGGC 1044
BSNT_05842___ 1054 ACGCCCCATAATACGGTCACACCGAT-----------TGCGCGGCGCAGG 1092
|||||.|||||.|||.|.||.||.|| ||.||||||
BL00193___gal 1045 ACGCCACATAACACGATTACGCCTATCGCAAGAAACGTGAGCGGCG---- 1090
BSNT_05842___ 1093 GGAGACTTGTACGAACTCGATATCGTACTGAGGAACAACCGGACGGATGA 1142
|.||.|||.||||..|.||.||.||.|||||||||||...||.
BL00193___gal 1091 -------TTTATGAAATCGACCTTGTGCTCAGAAACAACCGGACATCTGC 1133
BSNT_05842___ 1143 GGAGCATCCATTAGGAATATTTCATCCTCATCAAGAAGTCCACCATATTA 1192
.|||||.||||..||.|||||.|||||.|||...||.||.||||||||||
BL00193___gal 1134 CGAGCACCCATACGGCATATTCCATCCGCATGCTGACGTTCACCATATTA 1183
BSNT_05842___ 1193 AAAAAGAAAATATCGGCCTGATTGAGGTCATGGGATTGGCGATATTGCCT 1242
|.|||||.|||||||||.|.||.||.||.|||||..||||..|..|.|||
BL00193___gal 1184 AGAAAGAGAATATCGGCTTAATCGAAGTGATGGGCCTGGCCGTCCTTCCT 1233
BSNT_05842___ 1243 GGCCGCTTACA---------GGAGGAAATGAAAGAAACGGCAGCGGCGCT 1283
..|||||||.| ||.||.|.|||||||| |
BL00193___gal 1234 CCCCGCTTAAAGACCGAATTGGCGGCAGTGAAAGAA-------------T 1270
BSNT_05842___ 1284 --ATGCTCTG-----CTGATCCAAAAACAGCCTTAGAACAAAATCCGC-T 1325
.|||||.| |.||| |||.|.||| .||| |
BL00193___gal 1271 TCCTGCTCGGTCAGTCAGAT---------GCCGTTGAA------GCGCAT 1305
BSNT_05842___ 1326 CA-CGGCAAAGCATAGTGAATGGGCTCTTCGGATGATGGAAAAAAGAACC 1374
|| ||| |||||||| || |.|
BL00193___gal 1306 CACCGG-----------GAATGGGC----CG----------------AAC 1324
BSNT_05842___ 1375 ATAACAAAAGAGAAT--GCAGATCTAGTCATAAAAGAAGAGCTGG--GA- 1419
|...|||||..|||| |.|||.|| |||..||..| ||||.|| ||
BL00193___gal 1325 AGCTCAAAACCGAATACGGAGAGCT-GTCCGAACCG--GAGCAGGCTGAA 1371
BSNT_05842___ 1420 -CA--TGTA----------TTCGCTCGCATT-----------CTTGAACA 1445
|| |||| ||.||..|.|.| |||||..|
BL00193___gal 1372 TCAATTGTACGAAAAGAACTTGGCAAGAAATTTGTCAAAGCCCTTGAGGA 1421
BSNT_05842___ 1446 CGCCGGTGTATTTAAACAGACAGCAGTGGGAAAACAGGCCTTCAGAAGGT 1495
||||||.|||||.|| ||||.|| ||| ||.||||...|.|
BL00193___gal 1422 CGCCGGAGTATTCAA--AGACCGC-----GAA-----GCTTTCATGCGCT 1459
BSNT_05842___ 1496 TCATCGATCAGTTGGGCGCCAAACCAGTCAAAAGCCTCAACCGCTAG--- 1542
|.||| ||| .||||||| |||.| ||
BL00193___gal 1460 TTATC-----------CGC----ACAGTCAA-----TCATC----AGGGG 1485
BSNT_05842___ 1542 --- 1542
BL00193___gal 1486 TAA 1488
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.