Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05843 and BL00191
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_05843___galK.1.5803.seq
# -bsequence dna-align/BL00191___galK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05843___galK-BL00191___galK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05843___galK-BL00191___galK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05843___galK
# 2: BL00191___galK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1316
# Identity: 740/1316 (56.2%)
# Similarity: 740/1316 (56.2%)
# Gaps: 289/1316 (22.0%)
# Score: 1787.0
#
#
#=======================================
BSNT_05843___ 1 ----ATGCGGGAAGAGCT-----AAAGGGGA---------TATTTGCAAG 32
||.|.|.|...||| ||| .|| |||||
BL00191___gal 1 ATGAATACTGCAGCCGCTTTATCAAA--CGACTTTCGTTCTATTT----- 43
BSNT_05843___ 33 TGTATTCGGAGA-AAAAGA----GGGATTACGGTTTTTTTTCGCACCTGG 77
||..||.| |||||| |.|| || .|||||.||.||.||
BL00191___gal 44 ----TTAAGACAGAAAAGACACCGCGA--AC----CTTTTTTGCTCCGGG 83
BSNT_05843___ 78 AAGAGTGAATCTGATTGGAGAACATACAGACTATAACGGCGGGCATGTAT 127
|||..|.||..|.||.||.|||||.||.||.|||||.||.|||||||| |
BL00191___gal 84 AAGGATCAACTTAATCGGCGAACACACGGATTATAATGGAGGGCATGT-T 132
BSNT_05843___ 128 TTCCGTG-CGCGCTGACAATGGGTACATATGCTGCTGTTGCAGAAAG--- 173
||||..| |.||.|..||.|.||.||.||||| |..|.||...|||
BL00191___gal 133 TTCCCCGCCTCGATTTCATTTGGCACCTATGC--CCTTGGCGTGAAGCGC 180
BSNT_05843___ 174 -------AAAAGACGGGCTTGTCCGGATGTATTCAGATAACT----TTAG 212
|||.|| ||||..|.||||||.|.|||| |.|.
BL00191___gal 181 GATGATCAAATGA--------TCCGCTTCTATTCAAAGAACTTCCCTGAC 222
BSNT_05843___ 213 AAACGCAGGCATCAAGGAATGCAGCCTTGA-CGACATTCG-CTATCAAAA 260
|| |||.||.|..|||||||| ||||| ||| .||.| ||.|.|..|
BL00191___gal 223 AA----AGGAATAATTGAATGCAG-CTTGAGCGA-TTTAGCCTTTGACCA 266
BSNT_05843___ 261 AGAAGACGACTGGGCGAACTACCCAAAAGGCGTGAT--TTATGAATTTCA 308
....||||.||||||.||.||.||.||.||..||.| ||.||| |.
BL00191___gal 267 GTCCGACGGCTGGGCCAATTATCCGAAGGGAATGTTCCTTTTGA----CG 312
BSNT_05843___ 309 ACAGAGG--GGATATGCA----GTTCCCCATGGCTTTGACATTGTATTTT 352
|.||.|| ||..|| || ||| ||.|||...||.|||.|.|.||
BL00191___gal 313 AAAGCGGCAGGCCAT-CAAATCGTT---CACGGCGCCGATATTTTGTATT 358
BSNT_05843___ 353 CAGGGAATATTCCAAACGGGGCGGGGCTGTCGTCTTCCGCTTCTATTGAA 402
..||.||||||||..||||.|||||.||.||.||||||||.||.|||||.
BL00191___gal 359 ACGGAAATATTCCGCACGGAGCGGGCCTCTCTTCTTCCGCATCGATTGAG 408
BSNT_05843___ 403 C-TGCTGATGGGGGTCGTGCTCCAAAA---CT-----ATTTTCATCCTGA 443
| ||| ||..||.||..||.| |||| || ||||.||..|
BL00191___gal 409 CTTGC-GACAGGCGTTTTGTT--AAAAGGGCTTTATGATTTGCAGAC--- 452
BSNT_05843___ 444 AGTAGATGCG--CTTGAGCTTGTGAAAATGGCGCAGCATGCGGAAAACCA 491
|||..|| ||..| |.|||||..|.|..||..|.|..||||||.|
BL00191___gal 453 ---AGACACGATCTCCA--TGGTGAAGCTCGGACAAAAAGTCGAAAACGA 497
BSNT_05843___ 492 TTTTATCGGCGTCAATTGCGGAATTATGGACCAATTTGCAATTGGAATGG 541
.|..||.|||||.....||||.||||||||.|||||.||.||.||.||||
BL00191___gal 498 ATACATTGGCGTGGGGAGCGGCATTATGGATCAATTCGCGATCGGCATGG 547
BSNT_05843___ 542 GGAAAAAACATCATGCGATGCTGCTGAACTGTGACACGCTTGACTA---- 587
|||||||..||||.|||||..||||..||||....||.|||||.||
BL00191___gal 548 GGAAAAAGGATCACGCGATTTTGCTAGACTGCCGTACACTTGATTACACA 597
BSNT_05843___ 588 ----------------TGAATATAGCAAACTCAATGT-CTCAGGCCTCGC 620
|||| || |||.|.|||| .|||
BL00191___gal 598 TACGCTCCCTTCGTGTTGAA---AG--AACACGATGTGATCA-------- 634
BSNT_05843___ 621 GCTGGTCATCGCGAATACGAACAAAAAAAGAACATTGGCTGACTCAAGCT 670
||||| |||||.||||||.|..|.||..||||.|..||.|..|
BL00191___gal 635 -----TCATC---AATACAAACAAACAGCGGACGCTGGCCGGGTCTAAAT 676
BSNT_05843___ 671 ATAATACGAGACGCCAAGAATGCAATGATGCATTGCT---TGATCTGAAA 717
|||||...||.|||....||||..|.||.|| ||| .||||||.||
BL00191___gal 677 ATAATGAAAGGCGCACCCAATGTGAAGAGGC---GCTCGGCGATCTGCAA 723
BSNT_05843___ 718 AA--AGGCCTCGATATTACAGCA---CTGGGCGACAT--------CAAGC 754
.| ||...||||| .||| |||||||| || .|||
BL00191___gal 724 CAGGAGTTGTCGAT-----CGCAAGCCTGGGCGA-ATTGACGATGGAAG- 766
BSNT_05843___ 755 CTTCTGATTTCGATGCGCATTCCAG--CCTGATCCAAAATGAAACGA--- 799
||||| ||.||.||| ||| |||.|||..||||||||..|
BL00191___gal 767 -----GATTT-GAAGCCCAT--CAGCACCTCATCAGAAATGAAATCAATC 808
BSNT_05843___ 800 ACAGACGCCGGGCAAAGCACGCTGTATACGAAAATCACCG--TGCTATCA 847
|.|.|||| ||.||.||.|||||.|||||||||..||| .|||
BL00191___gal 809 AAAAACGC---GCCAAACATGCTGTCTACGAAAATGCCCGGACGCT---- 851
BSNT_05843___ 848 AGACGGCCCATATGTTCAAA------GAGAACAATATAGATGAAATCG-- 889
||.|||.| ||.||| |.|| ||..||..|||
BL00191___gal 852 -GAAGGCGC-----TTGAAAAACTTCGCGA-------AGGCGACCTCGCC 888
BSNT_05843___ 890 ------GGC-AGTTAATGAAGGAATCCCACCTTTCATTGAAGGATGACTA 932
||| ||.|.|||||.||||||||..|.|||||.|.||||||.||
BL00191___gal 889 GGATTTGGCAAGCTGATGAATGAATCCCATTTGTCATTAAGGGATGATTA 938
BSNT_05843___ 933 TGAAGTAACATGCCCTGAACTTGATGAGCTTGTGTTTGCGGCATGGGATC 982
||||||.||..|.|..||.|||||||...||||....|||||.|||||.|
BL00191___gal 939 TGAAGTGACGGGGCTGGAGCTTGATGCCATTGTCCAGGCGGCCTGGGAAC 988
BSNT_05843___ 983 ACGAAGGTGTAATTGGATCAAGAATGACGGGAGCAGGCTTTGGCGGATGC 1032
|.||.|||||..||||..|..|.|||||.||.||.||.||.|||||.||.
BL00191___gal 989 AAGACGGTGTCCTTGGCGCCCGCATGACCGGCGCCGGGTTCGGCGGCTGT 1038
BSNT_05843___ 1033 ACCATCAGC-ATTGTAAAAGATGAGTTCGTTGATGATTTTATTCAGAAGG 1081
.|.|| .|| ||||||.||.|.|| |.|.|
BL00191___gal 1039 GCGAT-TGCGATTGTAGAAAAAGA-------------------CCGGA-- 1066
BSNT_05843___ 1082 TTGGAGACAGATATCAAGAA---------------------AAAACAG-- 1108
.||||||.|.|.||||| .||||.|
BL00191___gal 1067 ---CAGACAGCTTTAAAGAACGCGTGAATGCCGTCTACCGCGAAACGGTT 1113
BSNT_05843___ 1109 GGCTCCGA-GCGGACTTTTATGTCGCGGATATCGGAGAGGGAGCGAGAGA 1157
||||..|| ||.|..||||||...||||..||.||.||.||.||.|.|||
BL00191___gal 1114 GGCTATGATGCCGCTTTTTATACTGCGGCAATAGGCGACGGCGCCAAAGA 1163
BSNT_05843___ 1158 ACTAAAGGGGGAGTGA 1173
|.||.||
BL00191___gal 1164 AATATAG--------- 1170
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