Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06074 and BL00187
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence dna-align/BSNT_06074___yxeB.1.5803.seq
# -bsequence dna-align/BL00187___yxeB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06074___yxeB-BL00187___yxeB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06074___yxeB-BL00187___yxeB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06074___yxeB
# 2: BL00187___yxeB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 988
# Identity: 730/988 (73.9%)
# Similarity: 730/988 (73.9%)
# Gaps: 50/988 ( 5.1%)
# Score: 2633.0
#
#
#=======================================
BSNT_06074___ 1 ATGAAAAAGAACATATTGCTCGTGGGCATGCTTGTGCTGCTTCT-CATGT 49
.|||||||||||.|||||.|..|.||..|..||.||||| ||.| .||..
BL00187___yxe 1 GTGAAAAAGAACTTATTGATAATCGGTTTAGTTATGCTG-TTGTGTATAG 49
BSNT_06074___ 50 TTGTCAGCGCTTGC---AGCGGCACGGCTTCTAAAGGGAGC-----TCAA 91
|.||||||||.||| |||||||..||.||.||.||.||| ..||
BL00187___yxe 50 TGGTCAGCGCCTGCGGAAGCGGCAATGCGTCAAACGGTAGCAAAGAAAAA 99
BSNT_06074___ 92 GCGATTCTGCTTCCGAAAAAACAGAAATGAGAACATACAAATCACCAAAA 141
||| ||| |||.|||| ||.| ||||||||..|||| ||.
BL00187___yxe 100 GCG-----GCT---GAAGAAAC-GACA--AGAACATATCAATC----AAC 134
BSNT_06074___ 142 G---GGAA-CGTCAACATTCCTGCACATCCGAAACGCATCGTCACTGATT 187
| |||| |||.||.|||||..|||||||.||.||||||||.||.||.|
BL00187___yxe 135 GCGTGGAAGCGTGAAGATTCCAACACATCCAAAGCGCATCGTGACAGACT 184
BSNT_06074___ 188 TTTATGCCGGTGAATTGCTGTCTGTCGGGGCCAATGTGGTCGGCTCAGGC 237
||||||||||||||.||.|..|.|||||.||||||||.||||||||.|||
BL00187___yxe 185 TTTATGCCGGTGAACTGTTCACGGTCGGCGCCAATGTCGTCGGCTCCGGC 234
BSNT_06074___ 238 TCATGGTCATTTGATAATCCGTTTTTAAA--ATCAAAGCTGAAAAATGTG 285
||.|||||.||....|||||.|||||||| |.|..| |||||.||||.
BL00187___yxe 235 TCGTGGTCTTTCTCCAATCCATTTTTAAAGGACCGTA--TGAAAGATGTA 282
BSNT_06074___ 286 AAGGATGTTGGTGATCCAATAAGCGTTGAAAAAGTGATGGAGCTTCAGCC 335
|.||||.|.||.||.||.||.|..||.||||||||.|||.||||..||||
BL00187___yxe 283 ACGGATTTAGGCGACCCGATTAATGTGGAAAAAGTCATGAAGCTGAAGCC 332
BSNT_06074___ 336 TGACTTAATTGTTGTCATGAATGAAGAGAATGTTGATAAATTAAAGAAAA 385
|||.||||||||.||.|||||.||.||.|||...||.|||.|....||||
BL00187___yxe 333 TGATTTAATTGTCGTGATGAACGATGATAATTACGACAAACTGTCCAAAA 382
BSNT_06074___ 386 TCGCTCCGACTGTTGTCATACCTTATAACACAGCGAAAAACGTAGAAGAC 435
||||.|||||||||||.||.|||||||||||.||||||||.||..|.||.
BL00187___yxe 383 TCGCACCGACTGTTGTGATTCCTTATAACACGGCGAAAAATGTTCAGGAA 432
BSNT_06074___ 436 ACAGTCAGCATGTTCGGAGATATCGCCGGAGCGAAAGACAAAGC----AA 481
||.||.|..||||||||.||.||.||.|||||.|||||..|||| .|
BL00187___yxe 433 ACTGTTAAGATGTTCGGCGACATTGCAGGAGCTAAAGAAGAAGCTGAACA 482
BSNT_06074___ 482 AATCCTTTATGGCTGACTTTAACAAAAAAGCGGAAGCAGCTAAGAAGAAA 531
|.||||| ||.||.||..||...|||.||.|||||||.|.|||.|||
BL00187___yxe 483 ATTCCTT----GCCGATTTCGACCGGAAATCGAAAGCAGCGAGGAAAAAA 528
BSNT_06074___ 532 ATTGCCGGCGTCATCGACAAAGATGCAACCTTCGGCATTTATGAAAACAC 581
||.||....|||.||||||||.||||.||.|||||.||||||||||||||
BL00187___yxe 529 ATCGCTCAAGTCGTCGACAAAAATGCTACTTTCGGTATTTATGAAAACAC 578
BSNT_06074___ 582 AGACAAGGGCGAATTCTGGGTGTTCAATGACAATGGCGGACGCGGCGGCC 631
|||.||.|||.||||||||||||||||||||||.|||||.|||||.||||
BL00187___yxe 579 AGAAAAAGGCCAATTCTGGGTGTTCAATGACAACGGCGGCCGCGGAGGCC 628
BSNT_06074___ 632 AAGCTGTATACAATGCACTTGGGTTAAAAGCGCCTGAAAAAATTGAGCAA 681
||||.||.|||||.||.||.||.|||||.|||||||||||.|||.|..||
BL00187___yxe 629 AAGCCGTGTACAACGCGCTCGGCTTAAAGGCGCCTGAAAAGATTCAAAAA 678
BSNT_06074___ 682 GATGTCATCAAAAAAGGAGAGATGAAACAGCTCTCTCAAGAGGTTATTCC 731
||..||.||||||||||.||.||.|||.|.||.||....||.||..|.||
BL00187___yxe 679 GACATCTTCAAAAAAGGCGAAATCAAAGAACTTTCCTTGGAAGTCGTACC 728
BSNT_06074___ 732 TGAGTATGCCGCAGATTATATGTTCATTACGGATTACAACCCGAAAGGCG 781
|||.|||||.|||||.||.||||||.|.||.||.||.||||||||.||||
BL00187___yxe 729 TGAATATGCAGCAGACTACATGTTCGTGACAGACTATAACCCGAACGGCG 778
BSNT_06074___ 782 AAAGCAAAACACTCGACAAGCTGGAGAATTCCTCCATTTGGAAAAATCTT 831
|.||||||||.||.|||||||||.||.|.||.||||||||||||||.|||
BL00187___yxe 779 ACAGCAAAACGCTGGACAAGCTGAAGCAGTCTTCCATTTGGAAAAACCTT 828
BSNT_06074___ 832 GACGCTGTTAAACATAATCGCGTGTTTATCAATGACTTTGACTCGTTCTA 881
|||||.||.|||.|.||.||.||.||||||||.|||||||||.|||||||
BL00187___yxe 829 GACGCCGTCAAAAACAACCGTGTCTTTATCAACGACTTTGACACGTTCTA 878
BSNT_06074___ 882 CCCGTACGACCCGATTTCTGTCAGCAAACAGGTGGATATCATCACCGACA 931
.||||||||.|||||.|||||||||||||||||.|||.|.||.||.||.|
BL00187___yxe 879 TCCGTACGATCCGATCTCTGTCAGCAAACAGGTTGATTTGATTACGGAGA 928
BSNT_06074___ 932 TGCTGATCAAACGGGCCGAA---GAAAATAAAAAATAA 966
|||||.|.||.|| |||| ||.|||||..||
BL00187___yxe 929 TGCTGGTGAAGCG---CGAAAAGGAGAATAAGTAA--- 960
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