Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00378 and BL00185
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00378___glpT.1.5803.seq
# -bsequence dna-align/BL00185___glpT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00378___glpT-BL00185___glpT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00378___glpT-BL00185___glpT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00378___glpT
# 2: BL00185___glpT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1453
# Identity: 918/1453 (63.2%)
# Similarity: 918/1453 (63.2%)
# Gaps: 215/1453 (14.8%)
# Score: 2663.0
#
#
#=======================================
BSNT_00378___ 1 ATGCTTAATA-TATTTAAACCGGCTCCTCATATTGAGAGACT---GGATG 46
||| ||||.| |.|||||.||.||.||.|..||||||.|.|| |||.|
BL00185___glp 1 ATG-TTAAAACTGTTTAAGCCAGCACCGCCGATTGAGCGGCTGCCGGAAG 49
BSNT_00378___ 47 ATTCAAAGATGGATGCGGCATACAAACGGCTCAGACTGCAAGTATTCATT 96
| |||| ||.|||.|||.|||.||.....|||||||||||||.||..|.
BL00185___glp 50 A-TCAA--ATTGATTCGGAATATAAGAAATTCAGACTGCAAGTTTTTCTC 96
BSNT_00378___ 97 GGTATTTTCATTGGCTACGCAGGC-TACTACCTGCTACGGAAAAACTTTG 145
||.||.|||||.||.||.|| ||| |||||..|..|.||.|||||.||..
BL00185___glp 97 GGCATCTTCATCGGTTATGC-GGCATACTATTTAATTCGCAAAAATTTCT 145
BSNT_00378___ 146 CCTTTGCCATTCCTTATCTGCAGGAACAGGGATTTTCGAAAACAGAACTG 195
|..|||||||.||||||.||...|||.||||.|||||.||..|.|..||.
BL00185___glp 146 CGCTTGCCATGCCTTATTTGATCGAAGAGGGCTTTTCAAAGTCGGCGCTC 195
BSNT_00378___ 196 GGTTTGGTGC--TGGCCGCTGTGTCCATTGCGTACGGCTTCAGCAAATTC 243
||.|| ||| ||.|||||.|.|||||..|.|||||..|.|||||.|||
BL00185___glp 196 GGCTT--TGCCTTGTCCGCTCTATCCATCTCTTACGGGCTGAGCAAGTTC 243
BSNT_00378___ 244 ATCATGGGGATGGTGTCTGACCGCTGTAATCCGA-GATATTTTCTGGCGA 292
.|.||||..|.|.|.||.|||||..|.||||||| ||| .||.|||.|..
BL00185___glp 244 GTGATGGCCACGATATCGGACCGGAGCAATCCGAGGAT-GTTCCTGCCCG 292
BSNT_00378___ 293 CAGG------CCTAT----TTTTATCAGCAATC--------GTTAATATT 324
|.|| |||.| |.|.|||||| .|| ||| |.||
BL00185___glp 293 CCGGTTTGATCCTTTCCGCTGTCATCAGC-CTCTTGATGGGGTT--TGTT 339
BSNT_00378___ 325 CTATTCGTTTCAATGCCTTGGGTGACTTCGAGCGTCACCATCATGTTTAT 374
|..|| ||||| ||| |.|||| ||.||||.||||||||
BL00185___glp 340 CCTTT--TTTCA---CCT-------CATCGA---TCGCCATTATGTTTAT 374
BSNT_00378___ 375 TTTTATGTTTATCAACGGATGGTTTCAAGGAATGGGCTGGCCGCCATGCG 424
..|..||||..|.|||||.|||||.||.||.|||||.||||||| ||
BL00185___glp 375 CATGCTGTTCTTAAACGGCTGGTTCCAGGGCATGGGATGGCCGC----CG 420
BSNT_00378___ 425 GCAGGACAATG-----GCCCATTGGTTCTCCATAAGTGAACGCGGCACAA 469
.||||.| .|| |.|||.||||||..|.|.||.|||.|.||.|..|
BL00185___glp 421 TCAGGGC-GTGTCCTTGTCCACTGGTTCAGCGTCAGCGAAAGGGGAAATA 469
BSNT_00378___ 470 AAATGTCGATCTGGAATGTCGCCCATAACATAGGCGGCGGTATTCTTGCT 519
|||...|.||.||||||||||||||.||..|.|||||.||..|..|.||.
BL00185___glp 470 AAACCGCCATATGGAATGTCGCCCACAATGTCGGCGGGGGACTGATGGCG 519
BSNT_00378___ 520 CCGCTT------------GTCAC--TCTT----GGGAT--CGCGATGTTC 549
|||.|| |||.| |||| ||.|| ||.|||.|.|
BL00185___glp 520 CCGATTGCCGTTGCCGGCGTCGCCATCTTCTCAGGCATAACGGGATCTGC 569
BSNT_00378___ 550 GTCA--CT-TGGAAAAGCGTGTTTTTCTTCCCTGCCAT------CATCGC 590
..|| || || ||.|.||||||.|.||.||.|||.| ||||||
BL00185___glp 570 TACAGGCTATG--AAGGTGTGTTTATTTTGCCGGCCTTGGTCGCCATCGC 617
BSNT_00378___ 591 CATT---ATCATTTCATTTTTAATTGTTTTATTGG----TTCGTGATACG 633
|.|| .||||||| |||.||| |.||.||||||
BL00185___glp 618 CGTTGCCGTCATTTC-------------TTACTGGCTGATCCGGGATACG 654
BSNT_00378___ 634 CCTCAATCCTG-CGGACTCCCGCCAATTGAAGAGTATCGGAATGACTATC 682
||.||.| ||| ||||||.||.|||||.||.||.||.||.||.||.|||.
BL00185___glp 655 CCGCAGT-CTGTCGGACTTCCTCCAATCGAGGAATACCGCAACGATTATT 703
BSNT_00378___ 683 CAA-----------AACACGCTTTTAAAAATCAGGAAAAAGAATTAACAA 721
||| ||.|| |||| |||||.||||||.|||
BL00185___glp 704 CAAGCAAATCGAAGAAAAC-CTTT----------GAAAAGGAATTATCAA 742
BSNT_00378___ 722 CAAAAGAAATTCTTTTTCAATATGTGCTGAACAACAAATTTCTTTGGTAC 771
|.||||||||.|||||..||.||||..|.||.||.||||...|.|||...
BL00185___glp 743 CGAAAGAAATCCTTTTCAAACATGTATTAAATAATAAATGGGTGTGGGCG 792
BSNT_00378___ 772 ATCGCTTTTGCCAATGTATTTGTTTATTTCGTGCGATACGGCGTGGTTGA 821
|||||..|||||||..|.||.||.||.|||||.||.||||||||..|.||
BL00185___glp 793 ATCGCACTTGCCAACATTTTCGTGTACTTCGTCCGCTACGGCGTTCTGGA 842
BSNT_00378___ 822 CTGGGCGCCTACTTACTTAACAGAAGCCAAAGGCTTTTCTCCTGAAGAC- 870
.|||||.||.||.||.||||..||||..||||||||| |||
BL00185___glp 843 TTGGGCTCCAACCTATTTAAGCGAAGAAAAAGGCTTT---------GACA 883
BSNT_00378___ 871 --------TCGCGCTGGTCG--TATTTTCTTTACGAATACGCAGGCATAC 910
||..|| |||| ||||||||.||.||||..||.||.||.|
BL00185___glp 884 TGAGCAAATCAAGC--GTCGCTTATTTTCTGTATGAATGGGCGGGGATTC 931
BSNT_00378___ 911 CGGGAACAATCTTGTGCGGCTGGATCAGTGACCGATTCTTCAAAAGCCGC 960
||||.|||.|..||||||||||||||..||||..||..||.|||.|.|||
BL00185___glp 932 CGGGGACATTGCTGTGCGGCTGGATCTCTGACAAATGGTTTAAAGGACGC 981
BSNT_00378___ 961 CGGGCACCGGCAGGCGTTTTGTTTATGGCGGGGG---NCATTGCCGTATT 1007
||.|.||||||||||.||.|.||||||||.||.| .||.||.||..|
BL00185___glp 982 CGCGGACCGGCAGGCTTTGTCTTTATGGCAGGTGTTTTGATCGCGGTGCT 1031
BSNT_00378___ 1008 GGTGTACTGGCTGAATCCGGCCGGCAATCCGCTCGTAGACA----ATATC 1053
.|||||||||.|.||.||.||||||||||||.|..|.|||| ||
BL00185___glp 1032 TGTGTACTGGTTCAACCCAGCCGGCAATCCGATGATCGACATGGCAT--- 1078
BSNT_00378___ 1054 GCCTTAATCAGC-ATTGGTTTCTTAATCTACGGACCTGTTATGCTGATCG 1102
|.||.||| || ||.||.|||.|.||.|||||.||.||.||||||||||
BL00185___glp 1079 -CATTGATC-GCGATCGGATTCCTCATTTACGGTCCCGTCATGCTGATCG 1126
BSNT_00378___ 1103 GCCTGCAAGCGATCGATCTAGCACCGAAAAAAGCAGCCGGAACTGCAGCC 1152
||||.||||||.|.||..|.|..||.||||||||.|||||.||.||.||.
BL00185___glp 1127 GCCTTCAAGCGCTTGACTTTGTTCCTAAAAAAGCGGCCGGCACGGCTGCA 1176
BSNT_00378___ 1153 GGTTTGACCGGATTTTTCGGATACATCGGCGGATCCGCCTT---CGCAAA 1199
||.||||||||..|.|||||.|||.|.|||||| .|||| .||.||
BL00185___glp 1177 GGATTGACCGGTCTGTTCGGTTACCTGGGCGGA---ACCTTGACGGCGAA 1223
BSNT_00378___ 1200 CGCCATTATGGGCTTTGTCGTTGA------CCGCTTTAATTGGAACGGCG 1243
.||..|.|||||..||.||||.|| |.|| |||||.|..|
BL00185___glp 1224 TGCGCTGATGGGTGTTATCGTCGATGCATCCGGC------TGGAATGCGG 1267
BSNT_00378___ 1244 GCTTTATCATGCTGATCTCTTCCTGCATTCTTGCCATCG------TCTTC 1287
||||||...|..|.|.|.||||.|| |||.|||| ||.|.
BL00185___glp 1268 GCTTTACGCTTTTAACCGCTTCATG------TGCAATCGCAGCACTCATA 1311
BSNT_00378___ 1288 TTGGCTTTGACATGGAAT--------ACAGGAAAACGGGCAGAGCATGTT 1329
||.||..||||.|||||| |||||||...|.| .|||| |
BL00185___glp 1312 TTTGCGATGACTTGGAATGTGCGGGGACAGGAAGTTGTG--AAGCA---T 1356
BSNT_00378___ 1330 TAA 1332
|||
BL00185___glp 1357 TAA 1359
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