Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06104 and BL00183
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_06104___iolS.1.5803.seq
# -bsequence dna-align/BL00183___iolS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06104___iolS-BL00183___iolS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06104___iolS-BL00183___iolS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06104___iolS
# 2: BL00183___iolS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 939
# Identity: 730/939 (77.7%)
# Similarity: 730/939 (77.7%)
# Gaps: 9/939 ( 1.0%)
# Score: 2807.5
#
#
#=======================================
BSNT_06104___ 1 ATGAAAAAAGCGAAGCTCGGAAAATCAGACTTGCAGGTATTCCCTATCGG 50
||||||||||..||..|.||.||||||||||||||.|||||.||.||.||
BL00183___iol 1 ATGAAAAAAGTTAAAGTTGGCAAATCAGACTTGCACGTATTTCCGATTGG 50
BSNT_06104___ 51 ATTAGGAACAAATGCTGTCGGAGGACATAACCTCTACCCGAACCTGAATG 100
.||.|||||.|||||||||||||||||||||||.||.|||||.||.||||
BL00183___iol 51 TTTGGGAACCAATGCTGTCGGAGGACATAACCTTTATCCGAATCTCAATG 100
BSNT_06104___ 101 AAGAAACCGGAAAAGAATTGGTGCGCGAGGCGATTCATAATGGCGTGACC 150
|||||||.|||||||||||||||||.||.||.||....||.|||||.||.
BL00183___iol 101 AAGAAACGGGAAAAGAATTGGTGCGGGAAGCAATAAGAAACGGCGTCACT 150
BSNT_06104___ 151 ATGTTAGACACCGCTTATATTTACGGGATCGGCCGTTCCGAAGAATTAAT 200
.|.|||||.|||||.||.||.|||||.||||||||||||||.||||||||
BL00183___iol 151 TTTTTAGATACCGCCTACATATACGGCATCGGCCGTTCCGAGGAATTAAT 200
BSNT_06104___ 201 TGGTGAAGTGCTGCGTGAATTCAACCGTGAAGATGTTGTCATCGCCACAA 250
.||.|||||.||....|||||||||||.||||||||.||.||.||.||||
BL00183___iol 201 CGGCGAAGTCCTTAAAGAATTCAACCGCGAAGATGTCGTGATTGCAACAA 250
BSNT_06104___ 251 AAGCCGCTCACAGAAAACAAGGCAATGACTTTGTCTTTGATAATTCACCA 300
|||||||.||.|..|||.||||..|.||.|||||||||||.||.||.||.
BL00183___iol 251 AAGCCGCCCATAAGAAAGAAGGAGACGATTTTGTCTTTGACAACTCTCCC 300
BSNT_06104___ 301 GAATTTCTAAAAAAATCAGTTGATGAAAGCCTAAAGCGCTTGAATACCGA 350
|.||||.|.|||||.||.||.||.||||||||.|||||..||.|.||.||
BL00183___iol 301 GCATTTTTGAAAAAGTCCGTCGAAGAAAGCCTGAAGCGGCTGCAAACTGA 350
BSNT_06104___ 351 TTATATTGATTTGTTCTACATTCACTTCCCTGACGAACATACGCCGAAGG 400
.||.||.||..|.|||||.||.||.||.|||||.|||.||||||||||.|
BL00183___iol 351 CTACATCGACCTTTTCTATATCCATTTTCCTGATGAAAATACGCCGAAAG 400
BSNT_06104___ 401 ATGAAGCCGTTAACGCATTGAATGAGATGAAGAAAGCCGGAAAAATCCGC 450
|.|||||.|||.|.||..|..||||..|||||.|.|..||.||||||.|.
BL00183___iol 401 ACGAAGCGGTTCAGGCGCTCCATGAACTGAAGCAGGAAGGCAAAATCAGA 450
BSNT_06104___ 451 TCCATCGGTGTATCCAACTTCTCTTTAGAGCAATTGAAAGAAGCAAACAA 500
.|.|||||||||||||||||.|||.|.|||||..||||||||||.|||||
BL00183___iol 451 GCAATCGGTGTATCCAACTTTTCTCTTGAGCAGCTGAAAGAAGCGAACAA 500
BSNT_06104___ 501 AGACGGTTTGGTAGATGTATTGCAAGGCGAATACAACCTGTTAAACCGTG 550
||||||.|||||.|||||..|.||||||||||||||||||.|.|||.|.|
BL00183___iol 501 AGACGGATTGGTGGATGTGCTCCAAGGCGAATACAACCTGCTGAACAGGG 550
BSNT_06104___ 551 AAGCGGAAAAAACATTCTTCCCGTATACGAAGGAGCATAACATTTCATTT 600
||||.||.|..|||||||||||||||||..|||||||||||||.||||||
BL00183___iol 551 AAGCTGAGACGACATTCTTCCCGTATACACAGGAGCATAACATCTCATTT 600
BSNT_06104___ 601 ATCCCTTACTTCCCGCTCGTATCAGGTTTATTGGCAGGAAAGTATACA-- 648
.|.|||||||||||||||||.||.||.||..|.||.||||| |||||
BL00183___iol 601 GTTCCTTACTTCCCGCTCGTCTCCGGATTGCTCGCCGGAAA--ATACAGC 648
BSNT_06104___ 649 GAAGATACAACGTTCCCAGAAGGCGACCTGCGAAACGAACAGGAACACTT 698
|||||||||||||||||.||||||||||||.|||..|||..||||.||||
BL00183___iol 649 GAAGATACAACGTTCCCGGAAGGCGACCTGAGAAGAGAAATGGAAAACTT 698
BSNT_06104___ 699 CAAGGGCGAGCGTTTCAAAGAAAATATCAGAAAGGTCAACAAGCTTGCGC 748
|.|.|||||.||.|||||||||||.||.|||||.||.|||.|||||||||
BL00183___iol 699 CCAAGGCGAACGCTTCAAAGAAAACATTAGAAAAGTGAACCAGCTTGCGC 748
BSNT_06104___ 749 CGATTGCCGAAAAACACAACGTGGATATCCCTCACATCGTATTGGCCTGG 798
||||.||.||||||||.||.||.||.|||.|.||.|||||.|||||||||
BL00183___iol 749 CGATCGCGGAAAAACATAATGTCGACATCGCCCATATCGTCTTGGCCTGG 798
BSNT_06104___ 799 TATTTAGCAAGACCGGAAATTGATATTTTAATCCCTGGAGCAAAACGTGC 848
||.||.||..|.||.|||||.||..|.||.|||||.||.||.|||||.||
BL00183___iol 799 TACTTGGCGCGGCCTGAAATCGACGTGTTGATCCCGGGCGCCAAACGCGC 848
BSNT_06104___ 849 CGATCAGCTGATTGATAACATTAAAACAGCCGACGTGACGCTTTCTCAAG 898
.|||||||||||.||.|||.|.|||||.||.||.||.|..||.|||||||
BL00183___iol 849 TGATCAGCTGATCGACAACCTCAAAACGGCAGAAGTCAATCTGTCTCAAG 898
BSNT_06104___ 899 AAGATATTTCGTTTATTGATAAGCTGTT----CGCATAA 933
|.||.|||...||.||.||...|||||| ||| |||
BL00183___iol 899 AGGACATTGATTTCATCGACCGGCTGTTTGCCCGC-TAA 936
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