Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00521 and BL00143
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00521.1.5803.seq
# -bsequence dna-align/BL00143.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00521-BL00143.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00521-BL00143.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00521
# 2: BL00143
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 219/363 (60.3%)
# Similarity: 219/363 (60.3%)
# Gaps: 60/363 (16.5%)
# Score: 577.0
#
#
#=======================================
BSNT_00521 1 ATGGGGACAAGAGTGAGTTATCCGGTTGAAGTGAAA-CAGAAGGCTGTAG 49
|||||.||||||||...|||..|.|..|||||.||| ..||||....||
BL00143 1 ATGGGCACAAGAGTACATTACGCAGAAGAAGTAAAATGGGAAGTAATTA- 49
BSNT_00521 50 AAATGAGATTGGCAGGC-GTACCTATG------AAAGAGATCATGCAGGA 92
||||||.| ||.|| |.| ||| |||||.||.|||.|..|
BL00143 50 AAATGAAA----CAAGCTGGA---ATGACAAACAAAGAAATAATGGAACA 92
BSNT_00521 93 GTTGAATATCAAAAATAATACGCAGATTAAGACATGGGTCAGATGGTATA 142
..||...||.||||||||.||.||.|||||.||||||.|..|||||||.|
BL00143 93 ACTGGGGATAAAAAATAAGACTCAAATTAAAACATGGATGCGATGGTACA 142
BSNT_00521 143 AGGCTGGTGATACACATCGATTTGAACAGCCTGTTGGTAAGCAATACACT 192
|..|.||..|.||..||||||||...||.|..|||||.||.|||||..|.
BL00143 143 AAACAGGCCAAACCTATCGATTTTCGCAACAAGTTGGAAAACAATATTCC 192
BSNT_00521 193 TATGGAAAAGGTCCGGAGTATTCTTCCGAATTAGAG-------------- 228
||.||.||||...|||||.| |||.||.|
BL00143 193 TACGGTAAAGAATCGGAGGA--------AATGAGTGAGCTAGAAGAATTA 234
BSNT_00521 229 AAACTGCAGGCAGAGAATCGATATCTGAGA----CAACAG--AATGAAGT 272
||||| |.|||||..|.|.|| ||| |||..| |||.|
BL00143 235 AAACT------AAAGAATAAACAGCT-AGAGGCTCAATTGGCAATTA--- 274
BSNT_00521 273 GTTAAAAAAGTACAACGAATTGGAAAGGAAGTTGATAGCCAAACGTCA-- 320
|||||||||||.|.||..|.|||||| ||||| .|||||...||||
BL00143 275 --TAAAAAAGTACCAGGAGATCGAAAGG-AGTTG-GAGCCACGAGTCATT 320
BSNT_00521 321 GTCGAACTTGTAG 333
|||.||.||||||
BL00143 321 GTCCAAGTTGTAG 333
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