Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02956 and BL00127
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence dna-align/BSNT_02956___lexA.1.5803.seq
# -bsequence dna-align/BL00127___lexA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02956___lexA-BL00127___lexA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02956___lexA-BL00127___lexA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02956___lexA
# 2: BL00127___lexA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 625
# Identity: 482/625 (77.1%)
# Similarity: 482/625 (77.1%)
# Gaps: 8/625 ( 1.3%)
# Score: 1837.5
#
#
#=======================================
BSNT_02956___ 1 ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGC 50
||||||||||||||||||||.|||||||||||..|.|||||.|||||||.
BL00127___lex 1 ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGA 50
BSNT_02956___ 51 AGAGGTTAAATCAAAAGGATATCCGCCTTCCGTGAGAGAGATCGGAGAGG 100
|||.||.||....|||||.||||||||||||||.||.|||||||||||.|
BL00127___lex 51 AGAAGTGAAGCGCAAAGGCTATCCGCCTTCCGTCAGGGAGATCGGAGAAG 100
BSNT_02956___ 101 CTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGC-CCGCTT 149
|.|||||.||.|||||.||.||.||.||.||||||||.||||| ..||||
BL00127___lex 101 CGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTT 150
BSNT_02956___ 150 GGAAACAAAAGGGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAG 199
|||||.||.||..||||||||.|.||||||||.||.||.|||||.||.|
BL00127___lex 151 -GAAACGAAGGGATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCG 199
BSNT_02956___ 200 AAATTCTTGAT------GAAGAAGTAGACATTCCGCAAAGCCAGGTCGTT 243
|||||||.||| ||.|||.|..|.||||||.|||.||||||.||.
BL00127___lex 200 AAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAACCAGGTTGTC 249
BSNT_02956___ 244 AATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGT 293
|||||.|||||||||||.||.||.||.||.||..|.||.|||||.|||||
BL00127___lex 250 AATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGT 299
BSNT_02956___ 294 AGAAAATATTGAAGAATATTTTCCGCTCCCAGACCGCATGGTTCCTCCAG 343
.|||||.||.||.|||||.||||||||.||.||.|||.|||..||.||.|
BL00127___lex 300 CGAAAACATCGAGGAATACTTTCCGCTTCCCGAACGCCTGGCGCCGCCGG 349
BSNT_02956___ 344 ACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCT 393
|.|||||.||.||.|||||||||||.||||||||.||.|||||.|||||.
BL00127___lex 350 ATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCC 399
BSNT_02956___ 394 GGTATTCTCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAA 443
||.|||||.|||.|.||.|||||.||.||.||.|||||.|||||.||.||
BL00127___lex 400 GGAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAA 449
BSNT_02956___ 444 CAATGGGGAAATTGTAGTTGCAATGACAGAAGATGATGAAGCAACTGTAA 493
|||.|||||.||.||.|||||.|||||.|||||.||.|||||.|||||.|
BL00127___lex 450 CAACGGGGATATCGTCGTTGCGATGACCGAAGACGACGAAGCGACTGTTA 499
BSNT_02956___ 494 AACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCA 543
|.||.||.|..||.|||||.|||||.||.|||.|.|||||.||.|||||.
BL00127___lex 500 AGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCG 549
BSNT_02956___ 544 ACGATGGAACCTATCATTTTGCAGAATGTCAGCATTCTAGGGAAAGTGAT 593
||||||||.||.|||||..|.||||||||.|..|||||.||.|||||.||
BL00127___lex 550 ACGATGGAGCCGATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCAT 599
BSNT_02956___ 594 TGGCGTGTTCAGAACCGTCCATTAA 618
.|||||.||..|.||.||.||||||
BL00127___lex 600 CGGCGTTTTTCGCACTGTTCATTAA 624
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