Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01007 and BL00115
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence dna-align/BSNT_01007___ydhP.1.5803.seq
# -bsequence dna-align/BL00115___bglD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01007___ydhP-BL00115___bglD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01007___ydhP-BL00115___bglD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01007___ydhP
# 2: BL00115___bglD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1479
# Identity: 1036/1479 (70.0%)
# Similarity: 1036/1479 (70.0%)
# Gaps: 144/1479 ( 9.7%)
# Score: 3551.0
#
#
#=======================================
BSNT_01007___ 1 TTGGCACAAACAGAA------------------CAATATCGTTTTCCAAA 32
.||.||.|||||||| |||||.|||||||||||
BL00115___bgl 1 ATGTCAAAAACAGAACCGCAGCTAGAACAAATTCAATACCGTTTTCCAAA 50
BSNT_01007___ 33 GGATTTTTGGTGGGGATCATCGGCTTCAGCAACACAAAC----GGAGGGT 78
.|..||.||||||||.||..|||||||.||.||.||.|| ||||.|
BL00115___bgl 51 TGGCTTCTGGTGGGGGTCGGCGGCTTCCGCCACTCAGACTGAAGGAGCG- 99
BSNT_01007___ 79 GCCGCCGACAGAGACGGAAAAGGCCAGAATATATGGGATTATTGGTTTGA 128
||.||||| ||..||.|||||..||||.||.||||||.|.||||..||
BL00115___bgl 100 GCGGCCGA---AGGAGGCAAAGGAAAGAACATTTGGGATCACTGGTACGA 146
BSNT_01007___ 129 AAAAGAACCGCATCGTTTTTTTGATCATGTCGGCCCCGCAG-ACACATCC 177
||||||.||..|.||.||||||||....||.|||||.| || |.||.||.
BL00115___bgl 147 AAAAGAGCCAAACCGATTTTTTGACGGAGTAGGCCCTG-AGAAGACTTCG 195
BSNT_01007___ 178 CAATTTTACGACAACTATAAAGAAGATA-TCAGGCTGATGAAGGAGCTTG 226
|..||||||||.|..||.|.|||||||| ||| |||||||||.|||||||
BL00115___bgl 196 CGTTTTTACGAGACTTACAGAGAAGATATTCA-GCTGATGAAAGAGCTTG 244
BSNT_01007___ 227 GCCACAACTCGTTCCGGATGTCGATTTCCTGGTCACGATTAATACCAAAC 276
|||||.||||.||.||..|.||.|||||.|||.|.||..|..|.||..|.
BL00115___bgl 245 GCCACCACTCTTTTCGTTTCTCCATTTCGTGGGCTCGTCTGTTTCCTGAT 294
BSNT_01007___ 277 GG-AACGGGCG--AGATCAACGATAAAGCCGCAAATTTCTATAACAATGT 323
|| ||.||||| .||.|||.||...|||.|| .||.||||||...||
BL00115___bgl 295 GGAAAAGGGCGGCTGAACAAAGAAGGAGCTGC---CTTTTATAACCGAGT 341
BSNT_01007___ 324 CATTGATGAGTTAATCGCTAAC----GGAATTGAACCTTTTGTCAATTTG 369
|||.|||| ||..|||..| ||.||.||.|||||||||||..|.
BL00115___bgl 342 CATCGATG----AACTGCTTGCGGCTGGCATCGAGCCTTTTGTCAACCTT 387
BSNT_01007___ 370 TTTCATTTCGATATGCCGATAGCGCTTCAAAAAATCGGTGGCTGGGTCAA 419
|.||||||.||.||||||.|.|||||.||..|||||||.||.|||| ||
BL00115___bgl 388 TATCATTTTGACATGCCGCTTGCGCTCCAGCAAATCGGCGGATGGG--AA 435
BSNT_01007___ 420 TAGAG---AGACG--------GTTG------ACGCGTATGAAAACTATGC 452
.|.|| ||.|| .||| |||||.|
BL00115___bgl 436 AACAGGCAAGTCGTCGATCACTTTGCTTCATACGCGGA------------ 473
BSNT_01007___ 453 AAGAACTTGCTTCCGTTTGTTTGGCGGCCGGGTGAAAAAATGGTTTACGC 502
|||.||||||.|..|||..||.|.|||.|||||||||||||||||.|
BL00115___bgl 474 ---AACGTGCTTCAGGCTGTACGGGGACCGAGTGAAAAAATGGTTTACCC 520
BSNT_01007___ 503 ATAATGAACCAATCGTTCCCGTAGAAGGCGGATACCTATATGATTTTCAT 552
|.|||||.||.||||||||.|.|||||||||.||.|||||.||||||||.
BL00115___bgl 521 ACAATGAGCCGATCGTTCCTGCAGAAGGCGGCTATCTATACGATTTTCAC 570
BSNT_01007___ 553 TATCCAAACAAGGTCGACTTTAAAGAGGCCGTCCAGGTTGGATTTCATAC 602
|||||.||||..|||||||||.||.|.|||||||||||.| |||||
BL00115___bgl 571 TATCCGAACATCGTCGACTTTCAAAAAGCCGTCCAGGTCG-----CATAC 615
BSNT_01007___ 603 GATG-----CTATCAAGTGCCCGC----GCCATTCAGGCTTA---CAG-- 638
.||| ||.|||| .||| ||..|..|.||||| |||
BL00115___bgl 616 CATGAAATTCTTTCAA----ACGCTAAAGCTGTCGAAGCTTATCGCAGAC 661
BSNT_01007___ 639 --GGAGATGAAGCAGGACGGAAAAATCGGCATCATCTTAAATTTGACCCC 686
||.| || |||||.||||||||||||||.||||||||.||.||
BL00115___bgl 662 TCGGGG-----GC--GACGGCAAAATCGGCATCATTTTAAATTTAACGCC 704
BSNT_01007___ 687 TTCATACCCGAGAAG-CAGCCATCCGGCGGATGTGAAAGCCGGGGAAATC 735
.||.||||||.|||| ||| ||||||||.|||||.|.|||....|||||.
BL00115___bgl 705 GTCCTACCCGCGAAGCCAG-CATCCGGCAGATGTAAGAGCATCTGAAATA 753
BSNT_01007___ 736 GCAGACGCGTTTTTTAACAGATCTTTTTTAGACCCATCTGTCAAAGGCGA 785
||.|||||.||.||||||.||||.|||.|.||.||..|.||.||.||.||
BL00115___bgl 754 GCCGACGCTTTCTTTAACCGATCGTTTCTTGATCCCGCCGTTAAGGGTGA 803
BSNT_01007___ 786 ATTTCCCAAAGAGCTGGTT------GACATTTTGAAGCATGAAGGCTTTA 829
.||||| ||.|.|| ||.||.||.||..|.|||||||.|.
BL00115___bgl 804 GTTTCC------GCAGCTTTTAACAGATATATTAAAAGAAGAAGGCTATT 847
BSNT_01007___ 830 TGCCAG--ATTACAACGCTGAAGA-----TCTT-GACATCATCAAAAAGA 871
||||.| || .||||| .||| ||..|.||||||||..
BL00115___bgl 848 TGCCTGTCAT--------GGAAGAAGGAGACTTGGAGCTGATCAAAAATC 889
BSNT_01007___ 872 ACACGGTTGACCTGTTGGGAGTGAATTATTACCAGCCGAGACGTGTGAAA 921
||||.||.||.|||.|.||..|.||||||||.|||||||||||.||||||
BL00115___bgl 890 ACACTGTCGATCTGCTCGGCATCAATTATTATCAGCCGAGACGGGTGAAA 939
BSNT_01007___ 922 GCGAAAGAACATCTTCCGAATCCCGACGCTCCTTTTTTACCGGACAGGTA 971
|||||.||.||.||.||..||||.|||||.||||||.|.|||||..|||.
BL00115___bgl 940 GCGAAGGAGCACCTGCCTCATCCGGACGCGCCTTTTATGCCGGAACGGTT 989
BSNT_01007___ 972 TTTTGATCCCTACGTCATGCCGGGCCGCAAAATGAATCCG-CATCGAGGC 1020
||||||.|..||.|..|||||.||.||.|||||||| ||| ||.||.|||
BL00115___bgl 990 TTTTGACCATTATGAAATGCCCGGACGAAAAATGAA-CCGCCACCGCGGC 1038
BSNT_01007___ 1021 TGGGAGATCTATGAAAAAGGCGTTTATGATATTTTGATCAATTTAAAAGA 1070
||||||||.|||||||||||..|.|||||||||||.||||||.|.|||||
BL00115___bgl 1039 TGGGAGATATATGAAAAAGGAATCTATGATATTTTAATCAATGTCAAAGA 1088
BSNT_01007___ 1071 AAACTACGGCAACATCGAGTGTTTTATCTCTGAAAACGGTATGGGGGTTG 1120
|||||||||.||.||.||.||.|||||.||||||||.||.|||||.||||
BL00115___bgl 1089 AAACTACGGAAATATTGAATGCTTTATTTCTGAAAATGGGATGGGCGTTG 1138
BSNT_01007___ 1121 AAGGTGAAGAGCGCTTCAGGGATGAACAAGGCATCATTCAAGATGATTAC 1170
||||.|||||.||.|||.|.|..|||.|.|||||.||.|..|||||.|||
BL00115___bgl 1139 AAGGAGAAGAACGTTTCCGCGGCGAAGACGGCATGATCCGCGATGACTAC 1188
BSNT_01007___ 1171 CGGATTGAATTTATAAAAGAGCACCTCAAATGGATTCACCGCGCCATACA 1220
.|.|||...|||||||||||.|||.|.||||||.|.|||.|.|||||.||
BL00115___bgl 1189 AGAATTTCGTTTATAAAAGAACACTTAAAATGGGTGCACAGAGCCATTCA 1238
BSNT_01007___ 1221 GGAAGGATCAAACGTAAAAGGTTATCA-CTTATGGACGTTCATGGACAAC 1269
|||||||.|.||.||.|||||.||||| ||| |||||.||||||||||||
BL00115___bgl 1239 GGAAGGAGCGAATGTCAAAGGCTATCATCTT-TGGACCTTCATGGACAAC 1287
BSNT_01007___ 1270 TGGTCTTGGACAAATGCCTATAAAAACCGATACGGATTTGTATCAGTCAA 1319
|||||.|||||.||.||||||||||||||.|||||.||||||||.|||||
BL00115___bgl 1288 TGGTCATGGACGAACGCCTATAAAAACCGCTACGGTTTTGTATCTGTCAA 1337
BSNT_01007___ 1320 TCTTGAGAAAGACGGAGAAAGAACCGTCAAAAAGAGCGGAAAATGGTTCA 1369
.|||||.|||.||||.|||.||||..|.|||||.||||||.|.|||||.|
BL00115___bgl 1338 CCTTGACAAAAACGGCGAACGAACGATTAAAAAAAGCGGATACTGGTTTA 1387
BSNT_01007___ 1370 AAAAGGTTGCTGAGCATAGCGGTTTCTAG 1398
|.||.|||||.|||.|.|.||||||.||.
BL00115___bgl 1388 AGAAAGTTGCCGAGAACAACGGTTTTTAA 1416
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