Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01008 and BL00114
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence dna-align/BSNT_01008___ydhQ.1.5803.seq
# -bsequence dna-align/BL00114___ydhQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01008___ydhQ-BL00114___ydhQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01008___ydhQ-BL00114___ydhQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01008___ydhQ
# 2: BL00114___ydhQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity: 491/753 (65.2%)
# Similarity: 491/753 (65.2%)
# Gaps: 78/753 (10.4%)
# Score: 1442.5
#
#
#=======================================
BSNT_01008___ 1 ATGAATAAATACGAAATTATTGCAAATGAAATGAGAAATAGAATT----A 46
||||..|||||||||..||||.||||.||||||||.|...|.||| |
BL00114___ydh 1 ATGAGAAAATACGAATATATTTCAAACGAAATGAGGAGGCGGATTCAGGA 50
BSNT_01008___ 47 AAAATAACGTATATCCGATCGATCAGCCCATTCCTGATGAAGTATCTCTT 96
..|||| .||||||||.|||||||||||.||||||||..|.|||||.
BL00114___ydh 51 GGAATA----CTATCCGATTGATCAGCCCATACCTGATGAGCTTTCTCTC 96
BSNT_01008___ 97 GCAAAAGAATTTAACTCAAGCCGCATGACGATGAAGAGAGCCTTGGATAA 146
||.||.||||||..||..|||.|.|||||||||||.||||||.|.||||.
BL00114___ydh 97 GCCAAGGAATTTTCCTGCAGCAGAATGACGATGAAAAGAGCCCTCGATAT 146
BSNT_01008___ 147 TTTAGTTGCCGAGGGTCTGCTGTTTAGAAAACGCGGCCATGGCACGTTTA 196
|.|.||..|.||.||..||||||...|.||.|||||.||.|||||.||.|
BL00114___ydh 147 TCTTGTGTCAGAAGGCATGCTGTACCGCAAGCGCGGACACGGCACCTTCA 196
BSNT_01008___ 197 TTATTCAATCTGCAATACAG--GATGACCATGTACA-TGT---AGTCAGC 240
||.|..||||..|.||.||| |.|..||.| || ||| ||.|.||
BL00114___ydh 197 TTGTAAAATCATCGATTCAGCAGCTTCCCGT---CAGTGTAACAGACCGC 243
BSNT_01008___ 241 AATGAGATTCTCGGATTGACCAA----CTTGCTGAAAGATAAAAAAATCC 286
||.|..||.||..||||||| ||||| ..|.|||.|||||.
BL00114___ydh 244 ---GAAAACCTTGGGCTGACCAAGCTTCTTGC----CAACAAACAAATCG 286
BSNT_01008___ 287 AAAGCAAGGTCATTCAGTTTAAAGTGCAATTTCCCACTGAGGAAGTGGCC 336
|||||....|||||||.|||.|.||..||||.||..|.||.||||||||.
BL00114___ydh 287 AAAGCCGCATCATTCAATTTGACGTCGAATTCCCTTCAGATGAAGTGGCA 336
BSNT_01008___ 337 GCCCATTTGTCTATTGATCAGAAAACA-----CCGGTTTATTATGTCGTT 381
...||.|||||.|| .|||||.| |||||.|||.||.||.|.
BL00114___ydh 337 AAGCAATTGTCAAT-----CGAAAAGACCGTTCCGGTGTATCATATCATC 381
BSNT_01008___ 382 CGGCTGCGAATTGTAGAAGGTGAACCCTATGT-ATTAGAAAAAACATATA 430
.||||..|||..||.|||||.|||||.||||| ||| |||.||||.||||
BL00114___ydh 382 AGGCTCAGAAAGGTTGAAGGCGAACCGTATGTCATT-GAAGAAACGTATA 430
BSNT_01008___ 431 TGCCGAC-----TCAT---TTAATACCGGGCATTAATGACGATGTCCTTC 472
||||..| |||| |.||| |.|||||.||.|||||||
BL00114___ydh 431 TGCCTTCGAACGTCATCTCTGAAT--------TAAATGAAGACGTCCTTC 472
BSNT_01008___ 473 ATGATTCGATCTACAATCATATTACAAATGTGCTGCAGCTCAAAATCGCC 522
|.|..||..|.|||...||.||.||..|...||||.|.||.|.|||||||
BL00114___ydh 473 ACGGCTCCGTTTACCGGCACATCACCGAGACGCTGAAACTGACAATCGCC 522
BSNT_01008___ 523 GGAACGCATCGGAAAATCAGAGCCTGCAAATC---TGATCATATTGACC- 568
|||.||||.|||||.|||||.||....||.|| ||..| |.||||
BL00114___ydh 523 GGATCGCACCGGAAGATCAGGGCGGATAAGTCGAGTGCAC---TCGACCG 569
BSNT_01008___ 569 AGCAGCATCTGGGCTGCAAACAGGATGATCCAATTCTTGAAGTGGAACAT 618
|| ||.|..|||..|||...|..||.|||||..||||||||||.|||||.
BL00114___ydh 570 AG-AGTACTTGGAATGCGCCCCTGACGATCCGGTTCTTGAAGTCGAACAG 618
BSNT_01008___ 619 GTGGGCTTCTTAGATACCGGGATTCCATTTGAATATTCCTTTTCACGTCA 668
||.|..||.|||.||||.|||...||.|||||||||||.|||.||.|.||
BL00114___ydh 619 GTCGCTTTTTTAAATACGGGGGAACCGTTTGAATATTCTTTTGCAAGGCA 668
BSNT_01008___ 669 TCGGCATGACAAGTTTGTTGT----GA-CTTCTGTAAACATA--CGGCGC 711
|||..||||.||||||| ||| || |.|| |||| |||...
BL00114___ydh 669 TCGCTATGATAAGTTTG-TGTTTTCGAGCGTC------CATATTCGGAAA 711
BSNT_01008___ 712 TGA 714
|||
BL00114___ydh 712 TGA 714
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