Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06283 and BL00107
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_06283___yyaA.1.5803.seq
# -bsequence dna-align/BL00107___noc.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06283___yyaA-BL00107___noc.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06283___yyaA-BL00107___noc.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06283___yyaA
# 2: BL00107___noc
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity: 684/861 (79.4%)
# Similarity: 684/861 (79.4%)
# Gaps: 18/861 ( 2.1%)
# Score: 2670.5
#
#
#=======================================
BSNT_06283___ 1 ATGAAGCATTCATTCTCTCGTTTCTTCGGGCTTGGTGAGAAGGAACAGGA 50
|||||||||||||||||||||.|||||||.|||||.||.||||||.|.||
BL00107___noc 1 ATGAAGCATTCATTCTCTCGTCTCTTCGGACTTGGCGACAAGGAAGAAGA 50
BSNT_06283___ 51 GCCGGAGATTGCTGAACATGATACAAACAAAGAAGAGATTCTGGAAATAC 100
..|.||||||||||||||||||||.||.||||||||.||||..||.||.|
BL00107___noc 51 AGCAGAGATTGCTGAACATGATACGAATAAAGAAGAAATTCAAGAGATTC 100
BSNT_06283___ 101 CGGTAAATGCTATCGTTCCCAACCGTTTTCAGCCACGCACCATTTTCTCA 150
|.|||...|.|||..||||.||||||||||||||.|||||||||||||||
BL00107___noc 101 CAGTAGGCGATATAATTCCTAACCGTTTTCAGCCGCGCACCATTTTCTCA 150
BSNT_06283___ 151 GATGAAAAAATCAAAGAGTTAGCAATG--ACCATTCATACACACGGCATT 198
||.||||||||.|||||.||||| || |||||||||||||||||||||
BL00107___noc 151 GAAGAAAAAATTAAAGAATTAGC--TGCAACCATTCATACACACGGCATT 198
BSNT_06283___ 199 ATTCAGCCGATTGTTGTTAGGCATACAGAAGAAGAAGGCCAATACGAACT 248
||.|||||||||||.||.||..|.|||||....|||||||||||.|||||
BL00107___noc 199 ATCCAGCCGATTGTCGTCAGAAAAACAGAGCGGGAAGGCCAATATGAACT 248
BSNT_06283___ 249 CATTGCAGGTGAAAGACGCTGGAGAGCGGTGCAATCGCTTGAGTGGGAAA 298
|||.||.||.||..|.||||||.|.|||||.|||.||||.||.|||||.|
BL00107___noc 249 CATAGCCGGAGAGCGGCGCTGGCGGGCGGTTCAAACGCTCGATTGGGAGA 298
BSNT_06283___ 299 AGATTCCGGCAATTATTAAGGATTTTTCCGACACGGAAACCGCTTCTGTG 348
||.||||.||.|||||||||||||||||.||.||.||.|||||||||||.
BL00107___noc 299 AGGTTCCCGCTATTATTAAGGATTTTTCAGATACAGAGACCGCTTCTGTC 348
BSNT_06283___ 349 GCGTTAATCGAGAACTTGCAGCGGGAAGAACTGTCTTCTATTGAGGAAGC 398
||..|.|||||.|||.|.|||.||||||||.|.|||||.|||||.||.||
BL00107___noc 349 GCTCTTATCGAAAACCTTCAGAGGGAAGAATTATCTTCGATTGAAGAGGC 398
BSNT_06283___ 399 GCATGCTTATGCTAGGCTGCTTGAGCTGCATGATTTAACACAGGAGGCAC 448
||||||||||||.|||||..|.|||||.||.|||||.||.|||||.||.|
BL00107___noc 399 GCATGCTTATGCAAGGCTTTTAGAGCTTCACGATTTGACGCAGGAAGCCC 448
BSNT_06283___ 449 TCGCAC--AGCGCTTAGGAAAAGGGCAGTCTACAATCGCGAATAAGCTTC 496
|.|||| || |||| |||||.||.|||||.||||||||.||||||||..
BL00107___noc 449 TTGCACAAAG-GCTT-GGAAAGGGCCAGTCAACAATCGCCAATAAGCTCA 496
BSNT_06283___ 497 GGTTATTAAAGCTGCCTCAGCCGGTCCAAGAGGCGATTATGGAGAAGAAA 546
|..|.||||||||.||..|...|||.||.||.|||||..||.|.||..||
BL00107___noc 497 GACTGTTAAAGCTTCCGGAAGAGGTGCAGGAAGCGATCTTGAAAAAAGAA 546
BSNT_06283___ 547 ATCACCGAGCGCCATGCCAGAGCGCTGATTCCGCTGAAACAGCCTGAGCT 596
||..|.||||||||.||.||||||||.||.|||.||||||||||.||.||
BL00107___noc 547 ATTTCAGAGCGCCACGCAAGAGCGCTCATACCGTTGAAACAGCCCGACCT 596
BSNT_06283___ 597 CCAAGTCACACTGCT-CACAGAGATTATTGAGAAAAGTTTAAATGTAAAG 645
.||.||||..||||| || .||..|.|||||.||.||||||||||||||.
BL00107___noc 597 TCAGGTCAAGCTGCTGCA-TGAAGTCATTGAAAAGAGTTTAAATGTAAAA 645
BSNT_06283___ 646 CAGACGGAAGACCGCGTGGTGAAAATGCTGGAGCAAGGCCAGA-GAAAGC 694
||.||.||||||||.||.||.||||||||.|||| |||..|.| |.||||
BL00107___noc 646 CAAACCGAAGACCGTGTCGTCAAAATGCTTGAGC-AGGATAAACGCAAGC 694
BSNT_06283___ 695 CAAAGCC---GAGACGCAAAGCATTCAGCAGAGATACAAGAATTGCGATG 741
|.||.|| |||| |||||.|.||||||.||..|.|||||.||||||
BL00107___noc 695 CTAAACCAAAGAGA---AAAGCGTACAGCAGGGACGCGAGAATCGCGATG 741
BSNT_06283___ 742 AACACGATTCGCCAGTCACTATCAATGGTGGAAGACAGCGGTGTAAAATT 791
||.||||||||||||||..||||||||||||||||||||||.||.|||.|
BL00107___noc 742 AATACGATTCGCCAGTCCTTATCAATGGTGGAAGACAGCGGCGTCAAACT 791
BSNT_06283___ 792 GAATACGGAAGAAGAAGAATTTGAAGAATATATTCAATTAACGATTCGCA 841
|||||||||||||||.||||||||||||||||||||.||.||||||||.|
BL00107___noc 792 GAATACGGAAGAAGAGGAATTTGAAGAATATATTCAGTTTACGATTCGAA 841
BSNT_06283___ 842 TACCAAAATAG 852
||||.|||||.
BL00107___noc 842 TACCGAAATAA 852
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