Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06281 and BL00104
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_06281___soj.1.5803.seq
# -bsequence dna-align/BL00104___soj.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06281___soj-BL00104___soj.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06281___soj-BL00104___soj.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06281___soj
# 2: BL00104___soj
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 790
# Identity: 604/790 (76.5%)
# Similarity: 604/790 (76.5%)
# Gaps: 29/790 ( 3.7%)
# Score: 2372.0
#
#
#=======================================
BSNT_06281___ 1 ---------------------------GTGGGAAAAATCATAGCAATTAC 23
|||||.|||||.||.||.||.||
BL00104___soj 1 TTGTTCAATGTGAAAGTAGGTGACATTGTGGGGAAAATTATTGCGATCAC 50
BSNT_06281___ 24 GAACCAAAAAGGCGGGGTCGGCAAAACAACGACGTCTGTCAACCTTGGGG 73
.|||||||||||.||.||.||.|||||.||.||.|||||.|||||.||.|
BL00104___soj 51 AAACCAAAAAGGTGGCGTTGGTAAAACGACAACCTCTGTTAACCTGGGAG 100
BSNT_06281___ 74 CATGTTTGGCTTACATAGGGAAAAGGGTTCTGCTGGTAGATATTGATCCG 123
|.||.||.||||||||.||||||||||||.||.|.||.||.||.||.|||
BL00104___soj 101 CTTGCTTAGCTTACATCGGGAAAAGGGTTTTGTTAGTCGACATAGACCCG 150
BSNT_06281___ 124 CAGGGAAATGCGACAAGCGGATTAGGGATTGAAAAAGCCGATGTAGAGCA 173
||.|||||.||.||||||||..|.||..|||||||.||.|||||.||.||
BL00104___soj 151 CAAGGAAACGCAACAAGCGGTATCGGCGTTGAAAAGGCTGATGTTGATCA 200
BSNT_06281___ 174 GTGTGTGTACGATATTTTAGTAGATGATGCAGATGTAATAGATATTATTA 223
.||||||||||||||.||||||||||||||||||||.|.||||.|.||.|
BL00104___soj 201 ATGTGTGTACGATATATTAGTAGATGATGCAGATGTGAAAGATGTCATCA 250
BSNT_06281___ 224 AAGCAACGACAGTAGAGAACTTGGATGTGATTCCTGCGACGATTCAGCTT 273
||.||||..|.|||||.|||||||||||.||||||||.|||||.||||||
BL00104___soj 251 AAACAACATCCGTAGAAAACTTGGATGTCATTCCTGCAACGATCCAGCTT 300
BSNT_06281___ 274 GCCGGGGCTGAGATCGAGCTGGTTCCTACAATATCAAGAGAAGTGAGATT 323
||.|||||.||.||.||.||.|||||.||.||.||..|||||||..|..|
BL00104___soj 301 GCGGGGGCGGAAATTGAACTTGTTCCGACCATCTCCCGAGAAGTCCGGCT 350
BSNT_06281___ 324 GAAGAGAGCGCTTGAAGCAGTAAAGCAAAATTATGATTATATTATCATTG 373
|||.||.||..|.|||.|.||.||.|||||.|||||||..||.||.||||
BL00104___soj 351 GAAAAGGGCTTTGGAATCGGTCAAACAAAACTATGATTTCATGATTATTG 400
BSNT_06281___ 374 ATTGTCCGCCGTCATT-GGGCTTGCTGACGATTAACGCCCTTACTGCCTC 422
|.||.||||||||||| |||| ||||.||.||.||.||.|||||.||.||
BL00104___soj 401 ACTGCCCGCCGTCATTAGGGC-TGCTTACAATCAATGCGCTTACGGCTTC 449
BSNT_06281___ 423 GGATTCCGTTGTGATTCCTGTACAGTGCGAATATTATGCCTTGGAGGGGC 472
.||||||||.||||||||.||.||||||||.||||||||..||||.||||
BL00104___soj 450 CGATTCCGTCGTGATTCCGGTCCAGTGCGAGTATTATGCGCTGGAAGGGC 499
BSNT_06281___ 473 TCAGCCAGTTATTAAATACAGTACGTCTTGTGCAAAAGCATTTGAATACT 522
|.||||||.|..|.||..|.||.||.||.||||||||.|||||.|||||.
BL00104___soj 500 TGAGCCAGCTGCTCAACTCTGTCCGGCTCGTGCAAAAACATTTAAATACG 549
BSNT_06281___ 523 GATTTAATGATTGAAGGTGTATTGCTGACAATGCTTGATGCCCGGACAAA 572
|||.|.|||||.||.||.|||||||||||||||||||||||..|.||.||
BL00104___soj 550 GATCTGATGATCGACGGCGTATTGCTGACAATGCTTGATGCAAGAACGAA 599
BSNT_06281___ 573 CCTTGGCATTCAAGTGATTGAAGAGGTTAAAAAGTATTTTAGGGATAAAG 622
..|.|||||.||.||.||.|||||.||.||||||||.||..|.|||||||
BL00104___soj 600 TTTAGGCATACAGGTCATCGAAGAAGTGAAAAAGTACTTCCGCGATAAAG 649
BSNT_06281___ 623 TATATAAGACAGTTATTCCGCGTAATGTCCGTCTGAGTGAGGCACCGAGT 672
||||.||.||.|||||.||.||.||||||||.||.|||||.||.||||||
BL00104___soj 650 TATACAAAACGGTTATCCCCCGGAATGTCCGGCTCAGTGAAGCGCCGAGT 699
BSNT_06281___ 673 CACGGAAAACCCATCATTTTATACGATCCGCGGTCAAGAGGTGCGGAAGT 722
||.|||||.||.|||||||||||.|||||.||.||.|||||.||||||||
BL00104___soj 700 CATGGAAAGCCGATCATTTTATATGATCCCCGTTCCAGAGGAGCGGAAGT 749
BSNT_06281___ 723 ATATTTAGATTTAGCAAAGGAAGTGGCTGCGAATGGCTAA 762
.||||||||.|||||||||||||||||||||||||.||||
BL00104___soj 750 CTATTTAGAATTAGCAAAGGAAGTGGCTGCGAATGCCTAA 789
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