Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06272 and BL00101
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_06272___yyaF.1.5803.seq
# -bsequence dna-align/BL00101___engD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06272___yyaF-BL00101___engD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06272___yyaF-BL00101___engD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06272___yyaF
# 2: BL00101___engD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1106
# Identity: 887/1106 (80.2%)
# Similarity: 887/1106 (80.2%)
# Gaps: 10/1106 ( 0.9%)
# Score: 3537.0
#
#
#=======================================
BSNT_06272___ 1 ATGGCTTTAACAGCTGGAATTGTTGGTTTGCCGAACGTCGGAAAATCAAC 50
|||||||||||||||||.||||||||||||||.|||||.||.||||||||
BL00101___eng 1 ATGGCTTTAACAGCTGGGATTGTTGGTTTGCCTAACGTTGGGAAATCAAC 50
BSNT_06272___ 51 ACTATTTAACGCAATTACACAGGCCGGTGCCGAATCAGCCAACTACCCGT 100
..|||||||.||||||||.||||||||.||.|||||.|||||||||||||
BL00101___eng 51 CTTATTTAATGCAATTACTCAGGCCGGGGCAGAATCGGCCAACTACCCGT 100
BSNT_06272___ 101 TCTGTACAATTGATCCGAACGTGGGAATTGTAGAGGTGCCGGATGATCGT 150
|.|||||.||||||||.|||||.||.||.|||||||||||.|||||.|||
BL00101___eng 101 TTTGTACGATTGATCCAAACGTCGGGATCGTAGAGGTGCCTGATGAGCGT 150
BSNT_06272___ 151 CTGCAAAAGCTGACTGAGCTGGTCAACCCGAAGAAGACTGTGCCGACTGC 200
||||||||||||||.||.||.|||||.||||||||.||.||.||.||.||
BL00101___eng 151 CTGCAAAAGCTGACAGAACTCGTCAATCCGAAGAAAACCGTTCCTACCGC 200
BSNT_06272___ 201 TTTTGAATTCACTGATATTGCAGGGATTGTAAAGGGCGCATCTAAAGGAG 250
.|||||||||||.|||||.|||||.||||||||.||.|||||.|||||||
BL00101___eng 201 ATTTGAATTCACCGATATCGCAGGCATTGTAAAAGGAGCATCAAAAGGAG 250
BSNT_06272___ 251 AAGGACTCGGCAACAAGTTCCTATCTCATATTCGCCAAGTTGACGCGATT 300
||||.|||||.|||||||||||.||.||.||.||||||||.||.|||||.
BL00101___eng 251 AAGGGCTCGGAAACAAGTTCCTGTCCCACATCCGCCAAGTAGATGCGATC 300
BSNT_06272___ 301 TGCCACGTTGTCCG-TGCTTTTTCCGATGACAACATTACACACGTTTCCG 349
|||||.|||||||| || ||||.||||||||||.||.||||||||.||||
BL00101___eng 301 TGCCATGTTGTCCGCTG-TTTTGCCGATGACAATATCACACACGTGTCCG 349
BSNT_06272___ 350 GAAAGGTTGATCCGATTGATGACATTGAAACGATCAACCTTGAGCTGATC 399
|.||.||.|||||||||...||.||.||.|||||.||||||||||||||.
BL00101___eng 350 GGAAAGTAGATCCGATTTCGGATATCGAGACGATTAACCTTGAGCTGATA 399
BSNT_06272___ 400 CTCGCTGATATGGAAACGGTTGAAAAGCGGATTACACGCGTCAGCAAGCT 449
||.|||||..|.|||||.||.|||||||||||....||.|||.|.|||.|
BL00101___eng 400 CTGGCTGACCTTGAAACCGTGGAAAAGCGGATCGGGCGGGTCGGAAAGAT 449
BSNT_06272___ 450 TGCGAAGCAAAAAGATAAAGACGCTGTATTTGAGTTTGAGATTTTATCTA 499
.||.|||||||||||||||||.||.||.|||||.|||||||||||..|.|
BL00101___eng 450 GGCCAAGCAAAAAGATAAAGAAGCCGTGTTTGAATTTGAGATTTTGACAA 499
BSNT_06272___ 500 AACTGAAAGAAGCGTTTG-AGAGTGAAAAGCCTGCTCGATCTGTAGAATT 548
|..|.|||||.||||||| |.|| ||||||||.||.||.|||||.||.||
BL00101___eng 500 AGTTAAAAGAGGCGTTTGAACAG-GAAAAGCCGGCCCGCTCTGTCGAGTT 548
BSNT_06272___ 549 CACTGAGGAGCAGCAAAAGCTTGTGAAGCAGCTCCATTTACTGACTTCGA 598
|.|.||.||||||||||||.|..||||||||||.|||.|.|||||..|.|
BL00101___eng 549 CTCCGAAGAGCAGCAAAAGGTGTTGAAGCAGCTTCATCTGCTGACGACAA 598
BSNT_06272___ 599 AGCCTATTTTGTACGTGGCCAACGTAAGTGAAGATGAAGTTGCTGATCCA 648
|.|||.|.||.||.||.||.||.||.||.|||||||||||.||||||||.
BL00101___eng 599 AACCTGTCTTATATGTAGCTAATGTCAGCGAAGATGAAGTGGCTGATCCT 648
BSNT_06272___ 649 TCTGGCAATGAAAATGTAGCGAAGATTCGCGAGTACGCTGCCGGCGAAAA 698
||.||.||.||..|.||...||||.|.||.||.|..||.||.|..|||||
BL00101___eng 649 TCAGGTAACGAGTACGTTCAGAAGGTCCGGGAATTTGCAGCTGCTGAAAA 698
BSNT_06272___ 699 CGCAGAAGTTATCGTTGTATGTGCAAAAATCGAATCTGAAATCGCTGAGC 748
.||.|||||.|||||.||.||.|||||.||.||.||.|||||.||.||||
BL00101___eng 699 TGCGGAAGTCATCGTCGTCTGCGCAAAGATTGAGTCCGAAATTGCAGAGC 748
BSNT_06272___ 749 TTGAAGGCGAAGAAAAGCAAATGTTCTTGGAAGAGCTGGGCATTCAAGAA 798
|||||||||||||.|||...||||||.|.|||||.||.||||||.|||||
BL00101___eng 749 TTGAAGGCGAAGAGAAGGCGATGTTCCTTGAAGAACTCGGCATTGAAGAA 798
BSNT_06272___ 799 TCAGGTCTTGATCAGCTGATCAAAGCGTCTTACTCTCTTCTCGGCCTCGC 848
||.|||||.|||||||||||.||||||||.|||||.||.|||||.||.||
BL00101___eng 799 TCCGGTCTCGATCAGCTGATTAAAGCGTCCTACTCCCTCCTCGGACTTGC 848
BSNT_06272___ 849 AACATATTTCACAGCCGGAGAACAGGAAGTCAGAGCTTGGACATTCAAAA 898
.||.|||||.|||||.|||||||||||||||||||||||||||||.||||
BL00101___eng 849 TACTTATTTTACAGCGGGAGAACAGGAAGTCAGAGCTTGGACATTTAAAA 898
BSNT_06272___ 899 AAGGCATGAAAGCACCTGAGTGTGCAGGAATTATTCATAGTGACTTTGAG 948
||||.||||||||.|||||.|||||.||.||.||.||||..||||||||.
BL00101___eng 899 AAGGAATGAAAGCCCCTGAATGTGCGGGCATCATCCATACGGACTTTGAA 948
BSNT_06272___ 949 CGGGGCTTCATTCGTGCTGAGACAGTTGCTTATGAGGATCTTCTT---GC 995
||.||.||.||.|||||.||.||.||.||.||.||.|||||.||| ||
BL00101___eng 949 CGCGGATTTATCCGTGCGGAAACGGTCGCCTACGACGATCTGCTTGAAGC 998
BSNT_06272___ 996 GGGCGGCGGTATGGCAGGAGCTAAAGAGGCAGGAAAAGTCCGCCTTGAAG 1045
|||..|| |||.|.|.|||.||||||||.|||||||||||||||||||
BL00101___eng 999 GGGAAGC---ATGACCGCAGCAAAAGAGGCCGGAAAAGTCCGCCTTGAAG 1045
BSNT_06272___ 1046 GGAAAGAATATGTGGTCCAAGACGGAGATGTTATTCATTTCCGATTTAAT 1095
||||||||||..|.||..|||||||.|||||.|||||||||||.||.|||
BL00101___eng 1046 GGAAAGAATACATTGTTAAAGACGGCGATGTCATTCATTTCCGTTTCAAT 1095
BSNT_06272___ 1096 GTATAG 1101
|||||.
BL00101___eng 1096 GTATAA 1101
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