Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06271 and BL00100

See Amino acid alignment / Visit BSNT_06271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence dna-align/BSNT_06271___rpsF.1.5803.seq
#    -bsequence dna-align/BL00100___rpsF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06271___rpsF-BL00100___rpsF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06271___rpsF-BL00100___rpsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06271___rpsF
# 2: BL00100___rpsF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     255/288 (88.5%)
# Similarity:   255/288 (88.5%)
# Gaps:           0/288 ( 0.0%)
# Score: 1143.0
# 
#
#=======================================

BSNT_06271___      1 ATGAGAAAGTACGAAGTTATGTACATTATCCGCCCAAACATTGACGAAGA     50
                     |||||||||||||||.|.||||||||.|||||||||.||.||||.|||||
BL00100___rps      1 ATGAGAAAGTACGAAATCATGTACATCATCCGCCCAGACGTTGATGAAGA     50

BSNT_06271___     51 GTCTAAAAAAGCAGTTATCGAGCGTTTCAACAACGTTCTGACTTCTAACG    100
                     |||||||||.||.|||.|.||||||||.||||||.||.|.||..||||||
BL00100___rps     51 GTCTAAAAAGGCTGTTGTTGAGCGTTTTAACAACATTTTAACAACTAACG    100

BSNT_06271___    101 GTGCGGAGATCACTGGAACAAAGGATTGGGGTAAACGTCGTCTTGCTTAC    150
                     |||||||||||||||.||||||.||||||||.|||||.||||||||.|||
BL00100___rps    101 GTGCGGAGATCACTGAAACAAAAGATTGGGGAAAACGCCGTCTTGCATAC    150

BSNT_06271___    151 GAAATCAACGATTTCCGCGACGGTTTCTACCAAATCGTAAACGTTCAATC    200
                     |||||||||||||||||||||||.||||||||||||.|||||||||||.|
BL00100___rps    151 GAAATCAACGATTTCCGCGACGGATTCTACCAAATCTTAAACGTTCAAGC    200

BSNT_06271___    201 TGACGCTGCGGCAGTTCAAGAATTTGACCGTCTAGCTAAGATCAGTGACG    250
                     ||..||||..|||||||||||||||||||||.|||||||.||||||||||
BL00100___rps    201 TGGAGCTGAAGCAGTTCAAGAATTTGACCGTTTAGCTAAAATCAGTGACG    250

BSNT_06271___    251 ATATCATTCGCCACATTGTTGTTAAAGAAGAAGAATAA    288
                     |.||||||||||||||.||.||||||||||||||||||
BL00100___rps    251 ACATCATTCGCCACATCGTGGTTAAAGAAGAAGAATAA    288


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