Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06223 and BL00093

See Amino acid alignment / Visit BSNT_06223 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:11
# Commandline: needle
#    -asequence dna-align/BSNT_06223___yybT.1.5803.seq
#    -bsequence dna-align/BL00093___yybT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06223___yybT-BL00093___yybT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06223___yybT-BL00093___yybT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06223___yybT
# 2: BL00093___yybT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1992
# Identity:    1528/1992 (76.7%)
# Similarity:  1528/1992 (76.7%)
# Gaps:          21/1992 ( 1.1%)
# Score: 5743.5
# 
#
#=======================================

BSNT_06223___      1 ATGCCAAGCTTTTATGAAAAACCGCTGTTTCGGTATCCCATCTATGCATT     50
                     .|||||||.|||||||||||||||.|.|||||.||||||||.|||.|.||
BL00093___yyb      1 GTGCCAAGTTTTTATGAAAAACCGTTATTTCGATATCCCATATATTCTTT     50

BSNT_06223___     51 GATTGCTCTGT--CAATTATTACAATCCTCATCAGCTTTTATTTTAACTG     98
                     .||.| || ||  ||||.|||.|..|||||||||.|.||||||||||.||
BL00093___yyb     51 AATCG-TC-GTCACAATCATTTCTGTCCTCATCAACATTTATTTTAATTG     98

BSNT_06223___     99 GATATTAGGAACCGTCGAAGTGCTGCTGCTGGCAGTTATTTTGTTTTTTA    148
                     |.|...|||..|.|.||..||.|||.|.||||..||.|||||||..|||.
BL00093___yyb     99 GGTGGCAGGGGCGGCCGGCGTTCTGATTCTGGGTGTCATTTTGTACTTTT    148

BSNT_06223___    149 TTAAGCGTGCTGATTCTCTTATTCGACAAGAGATTGATGCTTATATTTCT    198
                     |.|||||.||.||.||.|..||..||.|||||.|.||.|.||||||.||.
BL00093___yyb    149 TGAAGCGGGCCGACTCCCAAATCAGAAAAGAGCTGGACGATTATATATCG    198

BSNT_06223___    199 ACGTTGTCCTACAGGTTGAAAAAAGTCGGTGAAGAGGCATTGATGGAAAT    248
                     |||.||||.||..|..|||||||||||||.||||||||..||.|.|||||
BL00093___yyb    199 ACGCTGTCTTATCGTCTGAAAAAAGTCGGAGAAGAGGCGCTGCTTGAAAT    248

BSNT_06223___    249 GCCGATTGGAATCATGCTTTTTAATGACCAATATTATATAGAATGGGCAA    298
                     ||||||.||.||||||||.|||||.||.||.||.|||||.||.|||||.|
BL00093___yyb    249 GCCGATCGGGATCATGCTGTTTAACGATCAGTACTATATCGAGTGGGCCA    298

BSNT_06223___    299 ATCCGTTTCTTTCCTCTTGCTTTAATGAAAGCACTTTAGTGGGGAGATCA    348
                     ||||.|||.|..|.||.|||||||||||||..||..|.||.||..|.||.
BL00093___yyb    299 ATCCTTTTATGGCGTCATGCTTTAATGAAAATACGCTCGTCGGCCGGTCG    348

BSNT_06223___    349 CTTTACGATACTTGTGAATCGGTAGTGCCGCTTATCAAACAAGAGGTGGA    398
                     |||||.||||||||||||||.||.||.||..|.||.||.||.||.|||||
BL00093___yyb    349 CTTTATGATACTTGTGAATCTGTCGTCCCTTTGATTAAGCAGGAAGTGGA    398

BSNT_06223___    399 ATCAGAAACGGTTACATTGAATGACCGCAAGTTTAGGGTTGTCATCAAAC    448
                     ..||||||||.||||..|||||||.||.||.||||..||.||||||||||
BL00093___yyb    399 CACAGAAACGATTACGCTGAATGAGCGGAAATTTAATGTGGTCATCAAAC    448

BSNT_06223___    449 GGGATGAGCGTCTGTTATATTTCTTTGATGTAACAGAACAAATTCAGATT    498
                     ||||.||....|||.|.||||||||||||||.|||||.||.|..||||||
BL00093___yyb    449 GGGAAGAAAAGCTGCTTTATTTCTTTGATGTCACAGAGCAGACGCAGATT    498

BSNT_06223___    499 GAAAAGCTATATGAAAACGAAAGAACCGTCCTGGCATATATTTTCCTTGA    548
                     |||||.|.|||.|||||.||||||||.||.||.||.||.||.||.||.||
BL00093___yyb    499 GAAAAACAATACGAAAATGAAAGAACGGTTCTTGCCTACATCTTTCTCGA    548

BSNT_06223___    549 TAACTATGATGATGTGACACAAGGATTGGATGACCAGACGAGAAGCACGA    598
                     |||.||.||.||||||||.|||||..|.|||||||||||.||||||.|||
BL00093___yyb    549 TAATTACGACGATGTGACGCAAGGGCTTGATGACCAGACCAGAAGCTCGA    598

BSNT_06223___    599 TGAACAGCCAGGTGACAT--CTTTGCTGAACGCTTGGGCGCAGGAGTACG    646
                     |.|||||..|.||.||||  ||||  |||||...|||||.||.|||||||
BL00093___yyb    599 TAAACAGTGAAGTAACATCGCTTT--TGAACCAGTGGGCCCAAGAGTACG    646

BSNT_06223___    647 GGATCTTCTTGAAAAGGACGTCTTCAGAGCGCTTTATCGCTGTACTTAAT    696
                     |.||.|||||.|||.||...||.||.|||||.||.||||..|||.|.||.
BL00093___yyb    647 GCATTTTCTTAAAACGGGTTTCCTCTGAGCGGTTCATCGGCGTATTAAAC    696

BSNT_06223___    697 GAACACATCTTAACTGAACTCGAAAATTCGAAGTTTTCGATTCTTGATGA    746
                     |||||.||.||||..||.||.|||...||.||||||||||||||||||||
BL00093___yyb    697 GAACATATTTTAAGCGAGCTAGAAGCATCAAAGTTTTCGATTCTTGATGA    746

BSNT_06223___    747 AGTGCGGGAAAAAACCT-CGTT--TGACGGTGTAGCGCTGACGTTAAGCG    793
                     |||.|||||.||.||.| ||||  | ||..|.|  |..|||||||||||.
BL00093___yyb    747 AGTTCGGGAGAAGACATCCGTTCAT-ACCATTT--CCTTGACGTTAAGCA    793

BSNT_06223___    794 TCGGTGTCGGGGCTTCAGTCTCTTCCCTGAAAGAACTTGGCGATTTGGCG    843
                     ||||..||||.||.||.||..|.||..|||||||.||.||||||||||||
BL00093___yyb    794 TCGGAATCGGTGCATCTGTTGCCTCGTTGAAAGAGCTCGGCGATTTGGCG    843

BSNT_06223___    844 CAATCCAGCTTGGACTTAGCACTGGGACGCGGCGGAGACCAGGTAGCCAT    893
                     |||||||||.|.|||||.||.|||||||||||.|||||.|||||.||.||
BL00093___yyb    844 CAATCCAGCCTTGACTTGGCGCTGGGACGCGGAGGAGATCAGGTGGCAAT    893

BSNT_06223___    894 TAAGCTGCCAAACGGCAAGGTGAAGTTTTACGGCGGTAAAACAAACCCAA    943
                     .||||.|||.|||||.||.||||||||||||||||||||.||.||.||.|
BL00093___yyb    894 CAAGCAGCCGAACGGGAAAGTGAAGTTTTACGGCGGTAAGACGAATCCTA    943

BSNT_06223___    944 TGGAGAAACGAACAAGGGTGCGGGCCCGCGTGATTTCTCACGCTTTAAAG    993
                     ||||.|||||.||..|.||..|.|||||.||.|||||.|||||..|.|||
BL00093___yyb    944 TGGAAAAACGGACGCGCGTCAGAGCCCGGGTCATTTCACACGCGCTCAAG    993

BSNT_06223___    994 GAAATCGTCACCGAAAGCAGCAATGTGATTATCATGGGGCATAAATTCCC   1043
                     ||.||.|||.|.|||||||||||||||||.||||||||.|||||.||.||
BL00093___yyb    994 GAGATTGTCTCTGAAAGCAGCAATGTGATAATCATGGGTCATAAGTTTCC   1043

BSNT_06223___   1044 CGACATGGATTCTATCGGCGCAGCGATCGGGATTTTAAAGGTGGCTCAGG   1093
                     |||.||||||||.|||||..||||.|||||||||||.|||||.||.||||
BL00093___yyb   1044 CGATATGGATTCGATCGGATCAGCCATCGGGATTTTGAAGGTCGCACAGG   1093

BSNT_06223___   1094 CAAATAACAAAGATGGTTTTATCGTGATTGACCCAAATCAAATCGGATCA   1143
                     ||||...||||||.||.|||.|||||||.|||.|.|||||.|||||.|||
BL00093___yyb   1094 CAAACGGCAAAGACGGCTTTGTCGTGATCGACTCCAATCAGATCGGTTCA   1143

BSNT_06223___   1144 AGTGTGCAGCGTTTGATTGGGGAAATCAAAAAATATGAAGAACTGTGGTC   1193
                     |||||.||..|..||||.|||||.||.||||||||.||||||||||||||
BL00093___yyb   1144 AGTGTTCAAAGACTGATCGGGGAGATTAAAAAATACGAAGAACTGTGGTC   1193

BSNT_06223___   1194 AAGATTTATTACGCCTGAAGAAGCAATGGAAATTTCCAATGATGACACAC   1243
                     .||.|||||||||||.|||||.||..|.||.||..|.||.||.|||||.|
BL00093___yyb   1194 CAGGTTTATTACGCCGGAAGAGGCGCTTGAGATCGCAAAAGACGACACGC   1243

BSNT_06223___   1244 TGCTTGTGATCGTTGATACACATAAGCCGTCACTCGTTATGGAGGAACGG   1293
                     ||||.||||||||||||||.||||||||.||..|.||.||.||.|||.||
BL00093___yyb   1244 TGCTCGTGATCGTTGATACGCATAAGCCTTCTTTTGTCATTGAAGAAAGG   1293

BSNT_06223___   1294 CTGGTCAATAAAATTGAACATATCGTGGTCATCGACCATCACCGCAGAGG   1343
                     ||||||||||||||||||.|||||||.||.|||||.|||||..|.|||||
BL00093___yyb   1294 CTGGTCAATAAAATTGAAAATATCGTCGTTATCGATCATCATAGAAGAGG   1343

BSNT_06223___   1344 TGAGGAGTTTATCAGAGATCCGCTGCTCGTTTATATGGAACCATACGCTT   1393
                     .||.||||||||.|.|||.||||||||.||.||||||||.||.|||||||
BL00093___yyb   1344 GGAAGAGTTTATTAAAGACCCGCTGCTTGTCTATATGGAGCCGTACGCTT   1393

BSNT_06223___   1394 CTTCCACAGCGGAATTGGTGACAGAGCTGCTTGAATATCAGCCGAAGCGC   1443
                     |.||.||||||||..|.||||||||||||||.|||||.||||||||||||
BL00093___yyb   1394 CATCTACAGCGGAGCTTGTGACAGAGCTGCTCGAATACCAGCCGAAGCGC   1443

BSNT_06223___   1444 TTAAAAATCAATATGATTGAAGCTACAGCCCTATTAGCTGGTATAATAGT   1493
                     |||||||||||.|||||.|||||.|||||.||.||.||.||.||.||.||
BL00093___yyb   1444 TTAAAAATCAACATGATCGAAGCAACAGCTCTTTTGGCCGGGATTATTGT   1493

BSNT_06223___   1494 GGATACAAAGAGCTTTTCTCTCCGCACGGGCTCGCGGACTTTTGATGCGG   1543
                     .|||||.||||||||.||.||.|||||.|||||.||.||.||.|||||||
BL00093___yyb   1494 CGATACGAAGAGCTTCTCGCTGCGCACCGGCTCCCGTACGTTCGATGCGG   1543

BSNT_06223___   1544 CTTCTTATTTAAGGGCAAAAGGCGCCGACACGGTGCTGGTGCAGAAGTTC   1593
                     |.||||||.|..|.|||||||||||.|||||.||..|||||||.|||||.
BL00093___yyb   1544 CGTCTTATCTGCGCGCAAAAGGCGCTGACACTGTATTGGTGCAAAAGTTT   1593

BSNT_06223___   1594 CTGAAAGAAACCGTTGATTCCTATATTCAACGGGCGAAGCTGATCCAGCA   1643
                     .|.||||||||.|..|||...||||||.||.||||||||||.||||||||
BL00093___yyb   1594 TTAAAAGAAACGGCCGATCATTATATTAAAAGGGCGAAGCTTATCCAGCA   1643

BSNT_06223___   1644 TACGGTCCTCTATAAAGATAACATTGCGATTGCTTCTCTTCCTGAAAATG   1693
                     |||.||..|.|||.||.|...|||.||.|||||.||.||.||.||..|||
BL00093___yyb   1644 TACCGTTTTTTATCAAAACGGCATCGCCATTGCATCGCTGCCGGACGATG   1693

BSNT_06223___   1694 A---AGAGGAATACTTCGATCAAGTGCTGATTGCGCAGGCTGCCGATTCG   1740
                     |   .||.||||||||.||.||.||..|.|||||.||.||.||.|||||.
BL00093___yyb   1694 AGGCGGACGAATACTTTGACCAGGTTATCATTGCACAAGCCGCGGATTCT   1743

BSNT_06223___   1741 CTGCTGTCGATGAGTGAGGTTGAGGCTTCATTTGCGGTGGCGAGACGGGA   1790
                     ||.|||||.|||||.||.||.||.||.||||||||.|||||||||.|.||
BL00093___yyb   1744 CTTCTGTCTATGAGCGATGTCGAAGCGTCATTTGCTGTGGCGAGAAGAGA   1793

BSNT_06223___   1791 TGAACAAACGGTTTGTATCAGTGCGCGGTCGCTTGGCGAGGTAAATGTTC   1840
                     .||..|.|||||.||||||||.||..|.|||||.|||||.||||||||||
BL00093___yyb   1794 CGAGAACACGGTATGTATCAGCGCAAGATCGCTCGGCGAAGTAAATGTTC   1843

BSNT_06223___   1841 AGATCATCATGGAGGCCCTGGAAGGCGGAGGGCATTTAACAAATGCGGCG   1890
                     |.|||||.|||||.||.||.||.|||||.||.||||||||.|||||.|||
BL00093___yyb   1844 AAATCATTATGGAAGCGCTCGAGGGCGGCGGTCATTTAACCAATGCTGCG   1893

BSNT_06223___   1891 ACTCAGTTGTCCGGCATTTCA--GTTTCTGAAGCGCTGGAACGGCTGAAG   1938
                     ||.|||.||.|||  ||.|||  |||...|||.||||....||.|||||.
BL00093___yyb   1894 ACACAGCTGACCG--ATATCACGGTTGAAGAAACGCTCCGCCGACTGAAA   1941

BSNT_06223___   1939 CACGCCATAGATGAGTATTTTGAGGGAGGCGTACAGAGATGA   1980
                     .|.||.||.||.||||||||.||.||||||.|.||||.||||
BL00093___yyb   1942 GAAGCGATTGACGAGTATTTCGAAGGAGGCATTCAGAAATGA   1983


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