Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06223 and BL00093
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence dna-align/BSNT_06223___yybT.1.5803.seq
# -bsequence dna-align/BL00093___yybT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06223___yybT-BL00093___yybT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06223___yybT-BL00093___yybT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06223___yybT
# 2: BL00093___yybT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1992
# Identity: 1528/1992 (76.7%)
# Similarity: 1528/1992 (76.7%)
# Gaps: 21/1992 ( 1.1%)
# Score: 5743.5
#
#
#=======================================
BSNT_06223___ 1 ATGCCAAGCTTTTATGAAAAACCGCTGTTTCGGTATCCCATCTATGCATT 50
.|||||||.|||||||||||||||.|.|||||.||||||||.|||.|.||
BL00093___yyb 1 GTGCCAAGTTTTTATGAAAAACCGTTATTTCGATATCCCATATATTCTTT 50
BSNT_06223___ 51 GATTGCTCTGT--CAATTATTACAATCCTCATCAGCTTTTATTTTAACTG 98
.||.| || || ||||.|||.|..|||||||||.|.||||||||||.||
BL00093___yyb 51 AATCG-TC-GTCACAATCATTTCTGTCCTCATCAACATTTATTTTAATTG 98
BSNT_06223___ 99 GATATTAGGAACCGTCGAAGTGCTGCTGCTGGCAGTTATTTTGTTTTTTA 148
|.|...|||..|.|.||..||.|||.|.||||..||.|||||||..|||.
BL00093___yyb 99 GGTGGCAGGGGCGGCCGGCGTTCTGATTCTGGGTGTCATTTTGTACTTTT 148
BSNT_06223___ 149 TTAAGCGTGCTGATTCTCTTATTCGACAAGAGATTGATGCTTATATTTCT 198
|.|||||.||.||.||.|..||..||.|||||.|.||.|.||||||.||.
BL00093___yyb 149 TGAAGCGGGCCGACTCCCAAATCAGAAAAGAGCTGGACGATTATATATCG 198
BSNT_06223___ 199 ACGTTGTCCTACAGGTTGAAAAAAGTCGGTGAAGAGGCATTGATGGAAAT 248
|||.||||.||..|..|||||||||||||.||||||||..||.|.|||||
BL00093___yyb 199 ACGCTGTCTTATCGTCTGAAAAAAGTCGGAGAAGAGGCGCTGCTTGAAAT 248
BSNT_06223___ 249 GCCGATTGGAATCATGCTTTTTAATGACCAATATTATATAGAATGGGCAA 298
||||||.||.||||||||.|||||.||.||.||.|||||.||.|||||.|
BL00093___yyb 249 GCCGATCGGGATCATGCTGTTTAACGATCAGTACTATATCGAGTGGGCCA 298
BSNT_06223___ 299 ATCCGTTTCTTTCCTCTTGCTTTAATGAAAGCACTTTAGTGGGGAGATCA 348
||||.|||.|..|.||.|||||||||||||..||..|.||.||..|.||.
BL00093___yyb 299 ATCCTTTTATGGCGTCATGCTTTAATGAAAATACGCTCGTCGGCCGGTCG 348
BSNT_06223___ 349 CTTTACGATACTTGTGAATCGGTAGTGCCGCTTATCAAACAAGAGGTGGA 398
|||||.||||||||||||||.||.||.||..|.||.||.||.||.|||||
BL00093___yyb 349 CTTTATGATACTTGTGAATCTGTCGTCCCTTTGATTAAGCAGGAAGTGGA 398
BSNT_06223___ 399 ATCAGAAACGGTTACATTGAATGACCGCAAGTTTAGGGTTGTCATCAAAC 448
..||||||||.||||..|||||||.||.||.||||..||.||||||||||
BL00093___yyb 399 CACAGAAACGATTACGCTGAATGAGCGGAAATTTAATGTGGTCATCAAAC 448
BSNT_06223___ 449 GGGATGAGCGTCTGTTATATTTCTTTGATGTAACAGAACAAATTCAGATT 498
||||.||....|||.|.||||||||||||||.|||||.||.|..||||||
BL00093___yyb 449 GGGAAGAAAAGCTGCTTTATTTCTTTGATGTCACAGAGCAGACGCAGATT 498
BSNT_06223___ 499 GAAAAGCTATATGAAAACGAAAGAACCGTCCTGGCATATATTTTCCTTGA 548
|||||.|.|||.|||||.||||||||.||.||.||.||.||.||.||.||
BL00093___yyb 499 GAAAAACAATACGAAAATGAAAGAACGGTTCTTGCCTACATCTTTCTCGA 548
BSNT_06223___ 549 TAACTATGATGATGTGACACAAGGATTGGATGACCAGACGAGAAGCACGA 598
|||.||.||.||||||||.|||||..|.|||||||||||.||||||.|||
BL00093___yyb 549 TAATTACGACGATGTGACGCAAGGGCTTGATGACCAGACCAGAAGCTCGA 598
BSNT_06223___ 599 TGAACAGCCAGGTGACAT--CTTTGCTGAACGCTTGGGCGCAGGAGTACG 646
|.|||||..|.||.|||| |||| |||||...|||||.||.|||||||
BL00093___yyb 599 TAAACAGTGAAGTAACATCGCTTT--TGAACCAGTGGGCCCAAGAGTACG 646
BSNT_06223___ 647 GGATCTTCTTGAAAAGGACGTCTTCAGAGCGCTTTATCGCTGTACTTAAT 696
|.||.|||||.|||.||...||.||.|||||.||.||||..|||.|.||.
BL00093___yyb 647 GCATTTTCTTAAAACGGGTTTCCTCTGAGCGGTTCATCGGCGTATTAAAC 696
BSNT_06223___ 697 GAACACATCTTAACTGAACTCGAAAATTCGAAGTTTTCGATTCTTGATGA 746
|||||.||.||||..||.||.|||...||.||||||||||||||||||||
BL00093___yyb 697 GAACATATTTTAAGCGAGCTAGAAGCATCAAAGTTTTCGATTCTTGATGA 746
BSNT_06223___ 747 AGTGCGGGAAAAAACCT-CGTT--TGACGGTGTAGCGCTGACGTTAAGCG 793
|||.|||||.||.||.| |||| | ||..|.| |..|||||||||||.
BL00093___yyb 747 AGTTCGGGAGAAGACATCCGTTCAT-ACCATTT--CCTTGACGTTAAGCA 793
BSNT_06223___ 794 TCGGTGTCGGGGCTTCAGTCTCTTCCCTGAAAGAACTTGGCGATTTGGCG 843
||||..||||.||.||.||..|.||..|||||||.||.||||||||||||
BL00093___yyb 794 TCGGAATCGGTGCATCTGTTGCCTCGTTGAAAGAGCTCGGCGATTTGGCG 843
BSNT_06223___ 844 CAATCCAGCTTGGACTTAGCACTGGGACGCGGCGGAGACCAGGTAGCCAT 893
|||||||||.|.|||||.||.|||||||||||.|||||.|||||.||.||
BL00093___yyb 844 CAATCCAGCCTTGACTTGGCGCTGGGACGCGGAGGAGATCAGGTGGCAAT 893
BSNT_06223___ 894 TAAGCTGCCAAACGGCAAGGTGAAGTTTTACGGCGGTAAAACAAACCCAA 943
.||||.|||.|||||.||.||||||||||||||||||||.||.||.||.|
BL00093___yyb 894 CAAGCAGCCGAACGGGAAAGTGAAGTTTTACGGCGGTAAGACGAATCCTA 943
BSNT_06223___ 944 TGGAGAAACGAACAAGGGTGCGGGCCCGCGTGATTTCTCACGCTTTAAAG 993
||||.|||||.||..|.||..|.|||||.||.|||||.|||||..|.|||
BL00093___yyb 944 TGGAAAAACGGACGCGCGTCAGAGCCCGGGTCATTTCACACGCGCTCAAG 993
BSNT_06223___ 994 GAAATCGTCACCGAAAGCAGCAATGTGATTATCATGGGGCATAAATTCCC 1043
||.||.|||.|.|||||||||||||||||.||||||||.|||||.||.||
BL00093___yyb 994 GAGATTGTCTCTGAAAGCAGCAATGTGATAATCATGGGTCATAAGTTTCC 1043
BSNT_06223___ 1044 CGACATGGATTCTATCGGCGCAGCGATCGGGATTTTAAAGGTGGCTCAGG 1093
|||.||||||||.|||||..||||.|||||||||||.|||||.||.||||
BL00093___yyb 1044 CGATATGGATTCGATCGGATCAGCCATCGGGATTTTGAAGGTCGCACAGG 1093
BSNT_06223___ 1094 CAAATAACAAAGATGGTTTTATCGTGATTGACCCAAATCAAATCGGATCA 1143
||||...||||||.||.|||.|||||||.|||.|.|||||.|||||.|||
BL00093___yyb 1094 CAAACGGCAAAGACGGCTTTGTCGTGATCGACTCCAATCAGATCGGTTCA 1143
BSNT_06223___ 1144 AGTGTGCAGCGTTTGATTGGGGAAATCAAAAAATATGAAGAACTGTGGTC 1193
|||||.||..|..||||.|||||.||.||||||||.||||||||||||||
BL00093___yyb 1144 AGTGTTCAAAGACTGATCGGGGAGATTAAAAAATACGAAGAACTGTGGTC 1193
BSNT_06223___ 1194 AAGATTTATTACGCCTGAAGAAGCAATGGAAATTTCCAATGATGACACAC 1243
.||.|||||||||||.|||||.||..|.||.||..|.||.||.|||||.|
BL00093___yyb 1194 CAGGTTTATTACGCCGGAAGAGGCGCTTGAGATCGCAAAAGACGACACGC 1243
BSNT_06223___ 1244 TGCTTGTGATCGTTGATACACATAAGCCGTCACTCGTTATGGAGGAACGG 1293
||||.||||||||||||||.||||||||.||..|.||.||.||.|||.||
BL00093___yyb 1244 TGCTCGTGATCGTTGATACGCATAAGCCTTCTTTTGTCATTGAAGAAAGG 1293
BSNT_06223___ 1294 CTGGTCAATAAAATTGAACATATCGTGGTCATCGACCATCACCGCAGAGG 1343
||||||||||||||||||.|||||||.||.|||||.|||||..|.|||||
BL00093___yyb 1294 CTGGTCAATAAAATTGAAAATATCGTCGTTATCGATCATCATAGAAGAGG 1343
BSNT_06223___ 1344 TGAGGAGTTTATCAGAGATCCGCTGCTCGTTTATATGGAACCATACGCTT 1393
.||.||||||||.|.|||.||||||||.||.||||||||.||.|||||||
BL00093___yyb 1344 GGAAGAGTTTATTAAAGACCCGCTGCTTGTCTATATGGAGCCGTACGCTT 1393
BSNT_06223___ 1394 CTTCCACAGCGGAATTGGTGACAGAGCTGCTTGAATATCAGCCGAAGCGC 1443
|.||.||||||||..|.||||||||||||||.|||||.||||||||||||
BL00093___yyb 1394 CATCTACAGCGGAGCTTGTGACAGAGCTGCTCGAATACCAGCCGAAGCGC 1443
BSNT_06223___ 1444 TTAAAAATCAATATGATTGAAGCTACAGCCCTATTAGCTGGTATAATAGT 1493
|||||||||||.|||||.|||||.|||||.||.||.||.||.||.||.||
BL00093___yyb 1444 TTAAAAATCAACATGATCGAAGCAACAGCTCTTTTGGCCGGGATTATTGT 1493
BSNT_06223___ 1494 GGATACAAAGAGCTTTTCTCTCCGCACGGGCTCGCGGACTTTTGATGCGG 1543
.|||||.||||||||.||.||.|||||.|||||.||.||.||.|||||||
BL00093___yyb 1494 CGATACGAAGAGCTTCTCGCTGCGCACCGGCTCCCGTACGTTCGATGCGG 1543
BSNT_06223___ 1544 CTTCTTATTTAAGGGCAAAAGGCGCCGACACGGTGCTGGTGCAGAAGTTC 1593
|.||||||.|..|.|||||||||||.|||||.||..|||||||.|||||.
BL00093___yyb 1544 CGTCTTATCTGCGCGCAAAAGGCGCTGACACTGTATTGGTGCAAAAGTTT 1593
BSNT_06223___ 1594 CTGAAAGAAACCGTTGATTCCTATATTCAACGGGCGAAGCTGATCCAGCA 1643
.|.||||||||.|..|||...||||||.||.||||||||||.||||||||
BL00093___yyb 1594 TTAAAAGAAACGGCCGATCATTATATTAAAAGGGCGAAGCTTATCCAGCA 1643
BSNT_06223___ 1644 TACGGTCCTCTATAAAGATAACATTGCGATTGCTTCTCTTCCTGAAAATG 1693
|||.||..|.|||.||.|...|||.||.|||||.||.||.||.||..|||
BL00093___yyb 1644 TACCGTTTTTTATCAAAACGGCATCGCCATTGCATCGCTGCCGGACGATG 1693
BSNT_06223___ 1694 A---AGAGGAATACTTCGATCAAGTGCTGATTGCGCAGGCTGCCGATTCG 1740
| .||.||||||||.||.||.||..|.|||||.||.||.||.|||||.
BL00093___yyb 1694 AGGCGGACGAATACTTTGACCAGGTTATCATTGCACAAGCCGCGGATTCT 1743
BSNT_06223___ 1741 CTGCTGTCGATGAGTGAGGTTGAGGCTTCATTTGCGGTGGCGAGACGGGA 1790
||.|||||.|||||.||.||.||.||.||||||||.|||||||||.|.||
BL00093___yyb 1744 CTTCTGTCTATGAGCGATGTCGAAGCGTCATTTGCTGTGGCGAGAAGAGA 1793
BSNT_06223___ 1791 TGAACAAACGGTTTGTATCAGTGCGCGGTCGCTTGGCGAGGTAAATGTTC 1840
.||..|.|||||.||||||||.||..|.|||||.|||||.||||||||||
BL00093___yyb 1794 CGAGAACACGGTATGTATCAGCGCAAGATCGCTCGGCGAAGTAAATGTTC 1843
BSNT_06223___ 1841 AGATCATCATGGAGGCCCTGGAAGGCGGAGGGCATTTAACAAATGCGGCG 1890
|.|||||.|||||.||.||.||.|||||.||.||||||||.|||||.|||
BL00093___yyb 1844 AAATCATTATGGAAGCGCTCGAGGGCGGCGGTCATTTAACCAATGCTGCG 1893
BSNT_06223___ 1891 ACTCAGTTGTCCGGCATTTCA--GTTTCTGAAGCGCTGGAACGGCTGAAG 1938
||.|||.||.||| ||.||| |||...|||.||||....||.|||||.
BL00093___yyb 1894 ACACAGCTGACCG--ATATCACGGTTGAAGAAACGCTCCGCCGACTGAAA 1941
BSNT_06223___ 1939 CACGCCATAGATGAGTATTTTGAGGGAGGCGTACAGAGATGA 1980
.|.||.||.||.||||||||.||.||||||.|.||||.||||
BL00093___yyb 1942 GAAGCGATTGACGAGTATTTCGAAGGAGGCATTCAGAAATGA 1983
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