Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06222 and BL00092
See
Amino acid alignment /
Visit
BSNT_06222 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence dna-align/BSNT_06222___rplI.1.5803.seq
# -bsequence dna-align/BL00092___rplI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06222___rplI-BL00092___rplI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06222___rplI-BL00092___rplI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06222___rplI
# 2: BL00092___rplI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 476
# Identity: 334/476 (70.2%)
# Similarity: 334/476 (70.2%)
# Gaps: 52/476 (10.9%)
# Score: 1160.5
#
#
#=======================================
BSNT_06222___ 1 ATGAAGGTTATTTTCTTACAAGATGTAAAAGGAAAAGGAAAAAAAGGCGA 50
||||||||.|||||||||||.|||||.|||||.|||||.|||||||||||
BL00092___rpl 1 ATGAAGGTAATTTTCTTACAGGATGTTAAAGGCAAAGGGAAAAAAGGCGA 50
BSNT_06222___ 51 AGTCAAAAACGTAGCAGACGGTTATGCGCATAACTTTCTAATTAAAAAAG 100
|||.|||||.|||||.||.||.||.|||||.||||||.|.||.|||||||
BL00092___rpl 51 AGTGAAAAATGTAGCGGATGGATACGCGCACAACTTTTTGATCAAAAAAG 100
BSNT_06222___ 101 GCCTCGCGGTTGAAGCGAACGCTTCAAACATCAGCGCGCTAAACGGACAA 150
|.||.||.||||||||||...|..|.||.|||||||||||..|.||.||.
BL00092___rpl 101 GGCTGGCTGTTGAAGCGACATCCGCCAATATCAGCGCGCTTGAAGGTCAG 150
BSNT_06222___ 151 AAGCAGAAAGAGAAAAAAGAAGCCATTGCTGAGCTTGAGCAGGCT----- 195
|||.|.||||||||.|||||||| .||||| ||.| ||
BL00092___rpl 151 AAGAAAAAAGAGAAGAAAGAAGC---GGCTGA-----AGAA--CTGAAAT 190
BSNT_06222___ 196 ------AAGAGCTTGAAAGAGACA---TTAGAAAAACTGACTGTTGAGCT 236
|||||| ||||| |.||| |.||.|.| |.||.||.|||||
BL00092___rpl 191 CTGCGAAAGAGC-TGAAA-AAACAGCTTGAGGAGA--TTACGGTGGAGCT 236
BSNT_06222___ 237 TAGCGCAAAATCAGGTGAGGGCGGCCGTTTATTTGGTTCAGTGACAAGCA 286
|...||.||.||.||.||.||||||||||||||.||.||.||||||||||
BL00092___rpl 237 TTCAGCCAAGTCCGGAGAAGGCGGCCGTTTATTCGGCTCCGTGACAAGCA 286
BSNT_06222___ 287 AGCAAATTACTGAACAGCTCCAAAAAGACCATAACATTAAAGTAGATAAG 336
|.||||||.|.||...|||.|||||||.||||.|..|.|||||.||.||.
BL00092___rpl 287 AACAAATTGCAGATGCGCTGCAAAAAGGCCATCAGTTAAAAGTCGACAAA 336
BSNT_06222___ 337 CG-------GAAGCTTGAACTGCCGGACGGCATTCGTGCATTAGGATATA 379
|| ||| ||.||| ||.|..|||||..||||.|||||||
BL00092___rpl 337 CGCAAAATCGAA--TTAAAC-----GATGCGATTCGCTCATTGGGATATA 379
BSNT_06222___ 380 CGAACGTGCCTGTGAAGCTGCATCCTGAAGTGCAGG-----CTGTGTTAA 424
||||.||.||.||||||||.|||||.|||||.||.| ||| |
BL00092___rpl 380 CGAATGTTCCCGTGAAGCTCCATCCGGAAGTACAAGCAACACTG-----A 424
BSNT_06222___ 425 AGGTACATGTAAAAGAAGAAGCTTAA 450
|.||.||.||.|||||..||.|.|||
BL00092___rpl 425 AAGTTCACGTGAAAGAGCAATCATAA 450
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.