Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00006 and BL00081
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:40
# Commandline: needle
# -asequence dna-align/BSNT_00006___gyrB.1.5803.seq
# -bsequence dna-align/BL00081___gyrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00006___gyrB-BL00081___gyrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00006___gyrB-BL00081___gyrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00006___gyrB
# 2: BL00081___gyrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1947
# Identity: 1501/1947 (77.1%)
# Similarity: 1501/1947 (77.1%)
# Gaps: 57/1947 ( 2.9%)
# Score: 5809.5
#
#
#=======================================
BSNT_00006___ 1 ------ATGGAACAGCAGCAAAACAGTTATGATGAAAATCAGATACAGGT 44
|||||| ||||||||.|.|||.||||||||||||||||||||
BL00081___gyr 1 GTGGCAATGGAA---CAGCAAAATAATTACGATGAAAATCAGATACAGGT 47
BSNT_00006___ 45 ACTAGAAGGATTGGAAGCTGTTCGTAAAAGACCGGGGATGTATATCGGTT 94
.|||||.|||||||||||.|||||.||||||||.||.|||||.|||||.|
BL00081___gyr 48 TCTAGAGGGATTGGAAGCCGTTCGGAAAAGACCCGGAATGTACATCGGGT 97
BSNT_00006___ 95 CGACAAACAGCAAAGGCCTTCACCACCTGGTATGGGAAATTGTCGACAAT 144
||||||.|.|||||||.||.|||||..|.|||||||||||||||||.||.
BL00081___gyr 98 CGACAAGCGGCAAAGGTCTGCACCATTTAGTATGGGAAATTGTCGATAAC 147
BSNT_00006___ 145 AGTATTGACGAAGCCCTCGCCGGTTATTGTACGGATATCAATATCCAAAT 194
||.||.||.|||||..|.||||||||.||.||.||.||||||.||..|||
BL00081___gyr 148 AGCATCGATGAAGCATTGGCCGGTTACTGCACTGAAATCAATGTCGCAAT 197
BSNT_00006___ 195 CGAAAAAGACAACAGTATCACGGTTGTAGATAATGGCCGCGGTATTCCAG 244
.||||||||||||||.|||||.||...|||.||.||.||.|||||.||.|
BL00081___gyr 198 TGAAAAAGACAACAGCATCACAGTAAAAGACAACGGACGGGGTATCCCGG 247
BSNT_00006___ 245 TCGGTATTCATGAAAAAATGGGCCGTCCTGCGGTAGAAGTCATTATGACG 294
|||||||||||||.||.|||||.|||||.||.||.||||||||.|||||.
BL00081___gyr 248 TCGGTATTCATGAGAAGATGGGTCGTCCCGCTGTGGAAGTCATCATGACT 297
BSNT_00006___ 295 GTACTTCATGCCGGAGGAAAATTTGACGGAAGCGGCTATAAAGTATCCGG 344
||.||.||.|||||||||||.||||||||||||||.||||||||.||.||
BL00081___gyr 298 GTCCTGCACGCCGGAGGAAAGTTTGACGGAAGCGGATATAAAGTTTCGGG 347
BSNT_00006___ 345 AGGATTACACGGTGTAGGTGCGTCTGTCGTAAACGCACTATCAACAGAGC 394
.||.||.|||||.||.|||||.|||||.||.|||||.||.|||||.||||
BL00081___gyr 348 CGGTTTGCACGGCGTCGGTGCTTCTGTTGTTAACGCCCTTTCAACCGAGC 397
BSNT_00006___ 395 TTGATGTGACGGTTCACCGTGACGGTAAAATTCACCGCCAAACTTA---- 440
|.|||||.||||||.||.|.||.||.|||||.|| |||
BL00081___gyr 398 TGGATGTAACGGTTTACAGAGATGGAAAAATCCA---------TTATCAG 438
BSNT_00006___ 441 -----TAAACGCGGAGTTCCGGTTACAGACC----TTGAAA-TCATTGGC 480
|.||||.||.|||||| |.|.| |||||| |||||||.
BL00081___gyr 439 GAATTTGAACGTGGCGTTCCG-----AAAGCTGATTTGAAAGTCATTGGA 483
BSNT_00006___ 481 GAAACGGATCATACAGGAACGACGACACATTTTGTCCCGGACCCTGAAAT 530
||.|||||....||.||||||||.|||||.||....||.||.||.|||||
BL00081___gyr 484 GATACGGAAGTGACGGGAACGACCACACACTTCAAGCCTGATCCGGAAAT 533
BSNT_00006___ 531 TTTCTCAGAAACAACCGAGTATGATTATGATCTGCTTGCCAACCGCGTAC 580
.|||.|.|||||.||.||.||.||.||||||..|||.||||..||.||.|
BL00081___gyr 534 ATTCACGGAAACGACTGAATACGACTATGATACGCTCGCCACTCGTGTCC 583
BSNT_00006___ 581 GTGAATTAGCCTTTTTAACAAAGGGCGTAAACATCACGATTGAGGATAAA 630
|.|||.|.||.||.||.|||||.|||||.||.||||||||.||.||.||.
BL00081___gyr 584 GCGAACTCGCTTTCTTGACAAAAGGCGTCAAAATCACGATCGAAGACAAG 633
BSNT_00006___ 631 CGTGAAGGACAAGAGCGCAAAAATGAATACCATTACGAAGGCGGAATTAA 680
||.||||||.||||.|||||.|||||||||...||.||||||||.|||||
BL00081___gyr 634 CGAGAAGGAAAAGAACGCAAGAATGAATACTGCTATGAAGGCGGTATTAA 683
BSNT_00006___ 681 AAGTTATGTAGAGTATTTAAACCGCTCTAAAGAGGTTGTCCATGAAGAGC 730
|||.|||||.||..|.||.|||||.||....||.|||.|.||||||||||
BL00081___gyr 684 AAGCTATGTTGAACACTTGAACCGTTCGCGGGAAGTTATTCATGAAGAGC 733
BSNT_00006___ 731 CGATTTACATTGAAGG--CGAAAAGGACGGCATTACGGTTGAAGTGGCTT 778
||.|.||.|||||||| |.||| |||||||||||.||.||.||||||.
BL00081___gyr 734 CGGTCTATATTGAAGGATCCAAA--GACGGCATTACAGTCGAGGTGGCTC 781
BSNT_00006___ 779 TGCAATACAATGACAGCTACACAAGCAACATTTACTCGTTTACAAACAAC 828
|.|||||||||||||||||.||||||||||||||.||.|||.|.||||||
BL00081___gyr 782 TTCAATACAATGACAGCTATACAAGCAACATTTATTCATTTGCTAACAAC 831
BSNT_00006___ 829 ATTAACACGTACGAAGGCGGTACCCATGAAGCTGGCTTCAAAACGGGCCT 878
|||.|.|||||.||||||||.|||||||||||.|||||.||.||.||..|
BL00081___gyr 832 ATTCATACGTATGAAGGCGGAACCCATGAAGCCGGCTTTAAGACCGGTTT 881
BSNT_00006___ 879 GACTCGTGTTATCAACGATTACGCCAGAAAAAAAGGGCTTATT-AAAGAA 927
|||..|.||.|||||.||||||||.|| ||.|||.|||.|||| ||||||
BL00081___gyr 882 GACGAGGGTCATCAATGATTACGCGAG-AAGAAACGGCGTATTCAAAGAA 930
BSNT_00006___ 928 AATGATCCAAACCTAAGCGGAGATGACGTAAGGGAAGGGCTGACAGCGAT 977
|..|||||.|||.||||||||||.|||||..|||||||..||||||||||
BL00081___gyr 931 AGCGATCCGAACTTAAGCGGAGAAGACGTCCGGGAAGGTTTGACAGCGAT 980
BSNT_00006___ 978 TATTTCAATCAAACACCCTGATCCGCAGTTTGAGGGCCAAACGAAAACAA 1027
||||||||||||.|||||.|||||.||.|||||.||.||.||||||||||
BL00081___gyr 981 TATTTCAATCAAGCACCCGGATCCTCAATTTGAAGGGCAGACGAAAACAA 1030
BSNT_00006___ 1028 AGCTGGGCAACTCAGAAGCACGGACGATCACCGATACGTTATTTTCTACG 1077
||||.||||||||||||||.||.|||||.||.|||.||.|||||||....
BL00081___gyr 1031 AGCTCGGCAACTCAGAAGCGCGTACGATAACAGATGCGCTATTTTCAGAA 1080
BSNT_00006___ 1078 GCGATGGAAACATTTATGCTGGAAAATCCAGATGCAGCCAAAAAAATTGT 1127
|||.|.||||..|||.||||.|||||.||.|||.||||.||||||||.||
BL00081___gyr 1081 GCGCTTGAAAAGTTTCTGCTAGAAAACCCGGATTCAGCGAAAAAAATCGT 1130
BSNT_00006___ 1128 CGATAAAGGCTTAATGGCGGCAAGAGCAAGAATGGCTGCGAAAAAAGCCC 1177
.||.|||||..|.|||||.||.||||||.|.||||||||.||.|||||.|
BL00081___gyr 1131 TGAAAAAGGGGTTATGGCCGCCAGAGCACGGATGGCTGCAAAGAAAGCAC 1180
BSNT_00006___ 1178 GTGAACTAACACGTCGTAAGAGTGCTTTGGAAATTTCAAACCTGCCCGGT 1227
|.|||.|.||.||..|.||.||.||..|.|||.|.||.||.|||||.||.
BL00081___gyr 1181 GCGAATTGACGCGCAGAAAAAGCGCCCTTGAAGTGTCCAATCTGCCGGGG 1230
BSNT_00006___ 1228 AAGTTAGCGGACTGCTCTTCAAAAGATCCGAGCATCTCCGAGTTATATAT 1277
||..|.||.|||||.|||||.|||||.||||..||.|||||..|.||.||
BL00081___gyr 1231 AAACTTGCTGACTGTTCTTCTAAAGACCCGACGATTTCCGAACTTTACAT 1280
BSNT_00006___ 1278 CGTAGAGGGTGACTCTGCCGGAGGATCTGCTAAACAAGGACGCGACAGAC 1327
|||.||||||||||||||.||.|||||.||.|||||.||.||||||.|.|
BL00081___gyr 1281 CGTTGAGGGTGACTCTGCGGGCGGATCGGCAAAACAGGGCCGCGACCGTC 1330
BSNT_00006___ 1328 ATTTCCAAGCCATTTTGCCGCTTAGAGGTAAAATCCTAAACGTTGAAAAG 1377
||||||||||.||||||||..|.|||||.|||||..|.|||||.|||||.
BL00081___gyr 1331 ATTTCCAAGCAATTTTGCCTTTGAGAGGGAAAATTTTGAACGTCGAAAAA 1380
BSNT_00006___ 1378 GCCAGACTGGATAAAATCCTTTCTAACAACGAAGTTCGCTCTATGATCAC 1427
|||.|.|||||.|||||..|.||.|||||.||.|||||.|||||||||||
BL00081___gyr 1381 GCCCGCCTGGACAAAATATTGTCCAACAATGAGGTTCGTTCTATGATCAC 1430
BSNT_00006___ 1428 AGCGCTCGGCACAGGTATTGGGGAAGACTTCAACCTTGAGAAAGCCCGTT 1477
.||.||.|||||.||.||.||||||||.|||||||||||.||||||||.|
BL00081___gyr 1431 CGCCCTTGGCACCGGAATCGGGGAAGATTTCAACCTTGAAAAAGCCCGCT 1480
BSNT_00006___ 1478 ACCACAAAGTTGTCATTATGACAGATGCCGATGTTGACGGCGCGCACATC 1527
||||||||||.||.||||||||.||||||||.||.||.||.||.||||||
BL00081___gyr 1481 ACCACAAAGTCGTGATTATGACGGATGCCGACGTCGATGGTGCACACATC 1530
BSNT_00006___ 1528 AGAACACTGCTGTTAACGTTCTTTTACAGATATATGCGCCAAATTATCGA 1577
||||||.|||||.|.||.||.||.|||.|.||.|||.|.||.||||||||
BL00081___gyr 1531 AGAACATTGCTGCTGACCTTTTTCTACCGCTACATGAGACAGATTATCGA 1580
BSNT_00006___ 1578 AAATGGCTACGTGTACATTGCACAGCCGCCGCTCTACAAGGTTCAACAGG 1627
|.|.||.||.||.|||||.||.||||||||.||.|||||.||.||.||||
BL00081___gyr 1581 ACAAGGATATGTCTACATCGCTCAGCCGCCTCTTTACAAAGTACAGCAGG 1630
BSNT_00006___ 1628 GGAAACGTGTTGAATATGCGTACAATGACAAGGAGCTTGAAGAGCTGTTA 1677
|||||||.|||||.|||||||||||||||.||.||||.|||||..|.|||
BL00081___gyr 1631 GGAAACGCGTTGAGTATGCGTACAATGACCAGCAGCTCGAAGAAATTTTA 1680
BSNT_00006___ 1678 AAAACTCTTCCTCAAACGCCTAAGCCTGGACTGCAGCGTTACAAAGGTCT 1727
|||...|||||.||||..||||||||.||.||||||||.|||||||||.|
BL00081___gyr 1681 AAAGAGCTTCCGCAAAATCCTAAGCCAGGCCTGCAGCGCTACAAAGGTTT 1730
BSNT_00006___ 1728 TGGTGAAATGAATGCCACCCAGCTATGGGAGACAACCATGGATCCTAGCT 1777
.||.||.||||||||.||.|||||.|||||.||.||.||||| |
BL00081___gyr 1731 GGGCGAGATGAATGCGACACAGCTTTGGGAAACGACGATGGA-------T 1773
BSNT_00006___ 1778 CCAGA-------ACACTTCTTCAGGTAACTCTTGAAGATGCAATGGATGC 1820
||||| |||.|.|||||.|||||.||..|||||||.||.|||||
BL00081___gyr 1774 CCAGAAACGCGGACATTGCTTCAAGTAACGCTCAAAGATGCGATTGATGC 1823
BSNT_00006___ 1821 GGACGAGACTTTTGAAATGCTTATGGGCGACAAAGTAGAACCGCGCCGAA 1870
|||.||.||.|||||||||||.|||||||||||.||.|||||||||||.|
BL00081___gyr 1824 GGATGAAACCTTTGAAATGCTGATGGGCGACAAGGTTGAACCGCGCCGCA 1873
BSNT_00006___ 1871 ACTTCATAGAAGCGAATGCGAGATACGTTAAAAATCTTGACATCTAA 1917
|||||||.||||.||||||..||||.||.||.|||.|.||.||.|||
BL00081___gyr 1874 ACTTCATCGAAGAGAATGCCCGATATGTAAAGAATTTGGATATTTAA 1920
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