Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00002 and BL00077
See
Amino acid alignment /
Visit
BSNT_00002 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence dna-align/BSNT_00002___dnaN.1.5803.seq
# -bsequence dna-align/BL00077___dnaN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00002___dnaN-BL00077___dnaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00002___dnaN-BL00077___dnaN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00002___dnaN
# 2: BL00077___dnaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1149
# Identity: 894/1149 (77.8%)
# Similarity: 894/1149 (77.8%)
# Gaps: 24/1149 ( 2.1%)
# Score: 3439.0
#
#
#=======================================
BSNT_00002___ 1 ATGAAATTCACGATTCAAAAAGATCGTCTTGTTGAAAGTGTCCAAGATGT 50
|||||.||.||.|||||||||||.||.||.||.|||||||||||||||||
BL00077___dna 1 ATGAAGTTTACAATTCAAAAAGACCGCCTGGTCGAAAGTGTCCAAGATGT 50
BSNT_00002___ 51 ATTAAAAGCAGTTTCATCCAGAACCACGATTCCCATTCTGACTGGTATTA 100
.||||||||.|||||.||.|||||.||||||||.||..|.||.|||||||
BL00077___dna 51 GTTAAAAGCCGTTTCTTCAAGAACGACGATTCCGATCTTAACCGGTATTA 100
BSNT_00002___ 101 AAATTGTTGCATCAGATGATGGAGTATCCTTTACAGGGAGTGACTCAGAT 150
||||.||.||.||.|||||.||.||.||..|.|||||.||.||.||.|||
BL00077___dna 101 AAATCGTGGCCTCTGATGAAGGGGTCTCTCTGACAGGCAGCGATTCCGAT 150
BSNT_00002___ 151 ATTTCTATTGAATCCTTCATTCCAAAAGAAGAAGGAGATAAAGAAATCGT 200
|||||.||||||||.||.||.||.||||||||.||.|||..|||.|||||
BL00077___dna 151 ATTTCGATTGAATCGTTTATCCCGAAAGAAGACGGCGATTTAGAGATCGT 200
BSNT_00002___ 201 CACTATTGAACAGCCCGGAAGCATCGTTTTACAGGCTCGCTTTTTTAGTG 250
.||.||||||||||||||.|||||.||..|.||.||.||.|||||.||||
BL00077___dna 201 GACAATTGAACAGCCCGGCAGCATTGTGCTTCAAGCCCGTTTTTTCAGTG 250
BSNT_00002___ 251 AAATTGTAAAAAAATTGCCGATGGCAACTGTAGAAATTGAAGTCCAAAAT 300
|||||||.|||||..||||||||.||||.||.|||||.||.||.||||||
BL00077___dna 251 AAATTGTCAAAAAGCTGCCGATGTCAACAGTGGAAATCGAGGTTCAAAAT 300
BSNT_00002___ 301 CAGTATTTGACGATTATCCGTTCTGGTAAAGCTGAATTTAATCTAAACGG 350
||.||.||.|||||.|||||.||.||.|||||.||.|||||..|||||||
BL00077___dna 301 CAATACTTAACGATCATCCGCTCCGGCAAAGCAGAGTTTAACTTAAACGG 350
BSNT_00002___ 351 ACTGGATGCTGACGAGTATCCGCACTTGCCGCAGATTGAAGAGCATCATG 400
..|||||||...|||.|||||||..||||||||.||||||||||||||.|
BL00077___dna 351 TTTGGATGCAAGCGAATATCCGCTTTTGCCGCAAATTGAAGAGCATCACG 400
BSNT_00002___ 401 CGATTCAGATCCCAACTGATTTGTTAAAAAATCTAATCAGACAAACAGTA 450
|..||||.||.||.||.|||.||.|.|||||.||.|||.|.|||||.||.
BL00077___dna 401 CTTTTCAAATTCCGACCGATCTGCTGAAAAACCTGATCCGCCAAACCGTT 450
BSNT_00002___ 451 TTTGCAGTGTCCACCTCAGAAACACGCCCTATCTTGACAGGTGTAAACTG 500
|||||||||||||||||||||||||||||.||||||||||||||||||||
BL00077___dna 451 TTTGCAGTGTCCACCTCAGAAACACGCCCAATCTTGACAGGTGTAAACTG 500
BSNT_00002___ 501 GAA----AGTGGAGCAAAGTGAATTATTATGCACTGCAACGGATAGCCAC 546
||| |.|||.| ||||||||.|||||||||||||||||||.||.
BL00077___dna 501 GAATGTCACTGGCG----GTGAATTAATATGCACTGCAACGGATAGTCAT 546
BSNT_00002___ 547 CGTCTTGCATTAAGAAAGGCCAAACTTGATATTCCAGAAGACAGATCTTA 596
||||||||..||||.||.||.||.||.||.|||...||||||||.||.||
BL00077___dna 547 CGTCTTGCGCTAAGGAAAGCTAAGCTCGACATTAACGAAGACAGTTCATA 596
BSNT_00002___ 597 TAACGTCGTGATTCCGGGAAAAAGTTTAACTGAACTCAGCAAGATTTTAG 646
.||.|||||.||.||.||||||||.|||||.||.||||||||.||..|.|
BL00077___dna 597 CAATGTCGTCATCCCAGGAAAAAGCTTAACCGAGCTCAGCAAAATCCTTG 646
BSNT_00002___ 647 ATGACAACCAGGAACTTGTAGATATCGTCATCACAGAAACCCAAGTTCTG 696
|||||.|.|||||.|||||.|||||.||.||.||.|||||.|||||.|||
BL00077___dna 647 ATGACCATCAGGAGCTTGTTGATATTGTGATTACCGAAACACAAGTGCTG 696
BSNT_00002___ 697 TTTAAAGCGAAAAACGTCTTATTCTTCTCACGGCTTCTGGACGGGAATTA 746
||||||.|.||||||||..|.||.|||||..|||||||.|||||.||.||
BL00077___dna 697 TTTAAAACAAAAAACGTTCTGTTTTTCTCCAGGCTTCTTGACGGAAACTA 746
BSNT_00002___ 747 TCCAGACAC-AACCAGCCTGATTCCGCAAGACAGCAAAACAGAA-ATCAT 794
|||.||.|| |||| ||||||||||.||.||.|||||||| ||| .|.||
BL00077___dna 747 TCCGGATACGAACC-GCCTGATTCCTCAGGAAAGCAAAAC-GAACTTGAT 794
BSNT_00002___ 795 TGTGAACACAAAAGAATTCCTTCAGGCCATTGATCGTGCATCTCTTTTAG 844
|||.||.||.||.|||||.||.|||||.||.||..|.||.||.|||||.|
BL00077___dna 795 TGTCAATACTAAGGAATTTCTCCAGGCGATCGACAGGGCTTCGCTTTTGG 844
BSNT_00002___ 845 CTAGAGAGGGACGCAACAACGTTGTAAAACTGTCCGCAAAACCGGC--TG 892
|.|||||.|||||.||||||||.||.|||||.||||| |.|||.| ||
BL00077___dna 845 CGAGAGAAGGACGAAACAACGTGGTGAAACTTTCCGC--AGCCGCCAATG 892
BSNT_00002___ 893 AATCCATTGAAATTTCTTCCAATTCACCGGAAATCGGTAAAGTTGTGGAA 942
|.||.||.|||||||||||.||.||.|||||||||||.||.|||||.|||
BL00077___dna 893 AGTCGATCGAAATTTCTTCAAACTCTCCGGAAATCGGAAAGGTTGTTGAA 942
BSNT_00002___ 943 GC----AATTGCTGCGGATCAAATTGAAGGTGAGGAATTAAATATCTCTT 988
.| || |||.||.||.||.|||||.||.||.|||||.||.||.|
BL00077___dna 943 ACGGTGAA----TGCCGAGCAGATCGAAGGGGAAGACTTAAAGATATCCT 988
BSNT_00002___ 989 TTAGTCCAAAATATATGCTGGATGCACTAAAGGTGCTTGAAGGAGCAGAA 1038
|||||||.|||||||||||||||||.||.||.||.||||||||||..||.
BL00077___dna 989 TTAGTCCGAAATATATGCTGGATGCCCTTAAAGTTCTTGAAGGAGAGGAC 1038
BSNT_00002___ 1039 ATACGCGTAAGCTTTACAGGTGCAATGAGACCTTTCTTAATTCGCACGCC 1088
||.|..||||||||.|||||.||.|||||.|||||..|.||.||.|||||
BL00077___dna 1039 ATTCATGTAAGCTTCACAGGCGCTATGAGGCCTTTTCTGATCCGTACGCC 1088
BSNT_00002___ 1089 GAATGATGAAACGATTGTACAGCTTATCCTCCCTGTCAGAACCTATTAA 1137
||||||.||..||||.||.||..|.||.||.||||||.|.||.||||||
BL00077___dna 1089 GAATGACGATTCGATCGTCCAATTAATTCTTCCTGTCCGGACGTATTAA 1137
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.