Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01449 and BL00074
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01449___ygxA.1.5803.seq
# -bsequence dna-align/BL00074___ygxA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01449___ygxA-BL00074___ygxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01449___ygxA-BL00074___ygxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01449___ygxA
# 2: BL00074___ygxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 908
# Identity: 660/908 (72.7%)
# Similarity: 660/908 (72.7%)
# Gaps: 46/908 ( 5.1%)
# Score: 2326.5
#
#
#=======================================
BSNT_01449___ 1 ATGGAAAATCTTCTCCGTCCAATTTACCAAGAAAGAGCAAGTCACCCCAA 50
||||||||||||||||||||.||||||||||||||||||||.|.|||..|
BL00074___ygx 1 ATGGAAAATCTTCTCCGTCCGATTTACCAAGAAAGAGCAAGCCGCCCTGA 50
BSNT_01449___ 51 TACATTGGCTGTCATTATGATTGAGAGAAGAAACAAAACATCTTCCTTAA 100
.|||.|.||||||||..||||||||||.|||||..||||.||.||...||
BL00074___ygx 51 CACACTCGCTGTCATGCTGATTGAGAGGAGAAATCAAACTTCATCTGCAA 100
BSNT_01449___ 101 CAGATAACTTTGATGCAGCTTTGCTGGTGATTGTAAAGGATGCTGATGAG 150
|||||||.||||||||.||.|||.||.|.||.||.||..|.|||||.||.
BL00074___ygx 101 CAGATAATTTTGATGCGGCATTGTTGATTATCGTTAATAAGGCTGAAGAC 150
BSNT_01449___ 151 CCAGTTTTTATAAAGCATTATGAATTTGATCATC----AAACAGCTTCTT 196
||.||.||..|.|||||||||||.||.|| | ||||.||||||.
BL00074___ygx 151 CCTGTATTCGTGAAGCATTATGAGTTCGA----CGGAAAAACGGCTTCTC 196
BSNT_01449___ 197 TGCATGTGGTAACAGATTCT------CAGATTCAAGAATGGATTTTGCTT 240
|.|||.|..| |||| |||.||||.|||||||||.|||||
BL00074___ygx 197 TTCATATTAT------TTCTGTTGAACAGCTTCAGGAATGGATTCTGCTT 240
BSNT_01449___ 241 GGAACAAATAGAAGAATCATAGATTGGATTGTAAATGGCAGAGT-CTTGT 289
||||||||.||.|||||||||||.|||.||.|.|||||.|..|| ||| |
BL00074___ygx 241 GGAACAAACAGGAGAATCATAGACTGGGTTCTCAATGGAAAGGTGCTT-T 289
BSNT_01449___ 290 TTGACCGTAATGAATACGTAGTTGAACTGATTGA-CAGGCTGAATACATT 338
|.|||||.||.||||...|.|...|.|||||||| || |||.||||||||
BL00074___ygx 290 TCGACCGAAACGAATTTATCGCCAAGCTGATTGAGCA-GCTCAATACATT 338
BSNT_01449___ 339 TCCGTTTGCCGAACGTAAACTGAAGATCGGACTCGAATACGGCAAATTAA 388
|||||||.|.|||.|.|||||.||.||||||||.||||||||.|||||||
BL00074___ygx 339 TCCGTTTTCAGAAAGAAAACTAAAAATCGGACTTGAATACGGGAAATTAA 388
BSNT_01449___ 389 TCAGAAGGTATGTTGAAGGGAAAGCTTTTTTTGAAGCCAATCAATTTTTA 438
|||||||.|||.|.|||||.|||.|.||||||||.|.|..|||||||||.
BL00074___ygx 389 TCAGAAGATATATAGAAGGAAAATCGTTTTTTGAGGACGGTCAATTTTTG 438
BSNT_01449___ 439 GATGCCTACAACGCCGTTGTTCATGCGCTGCATCATTTAGCACGTATTGA 488
|||||||||||..||.|.||.||.||.||.||.|||||.||..|.||.||
BL00074___ygx 439 GATGCCTACAATTCCATCGTACACGCCCTCCACCATTTGGCCAGAATCGA 488
BSNT_01449___ 489 AGTAATCGACAGAGGATTCCATCCCGAAACCACGGTGTGGAGCCAAGTGC 538
|||.|||||.|..||.||.||.||.|||...|||||.||||.||||||.|
BL00074___ygx 489 AGTGATCGATAAGGGGTTTCACCCTGAAGTTACGGTATGGAACCAAGTCC 538
BSNT_01449___ 539 GCCAGATGGAGCCGCAAGTGTACAAGTTATATTCCGAGCTGATTGAAAGT 588
||||.|||||.||.||.||.||.||.||.|||...||..|.||||||||.
BL00074___ygx 539 GCCACATGGAACCTCAGGTTTATAAATTGTATAAGGAATTAATTGAAAGC 588
BSNT_01449___ 589 CACGAGAGCCTGGAAAAAAGACTTGAATTATTATTCTTAGCAAATGATTT 638
.|.||.|||.||.|||||.|.||.||.|||||||||.|.||||..|||||
BL00074___ygx 589 AATGAAAGCTTGCAAAAACGGCTGGAGTTATTATTCCTCGCAAGCGATTT 638
BSNT_01449___ 639 TCTCATCCATTCCAAAGCCGAGATCGGTTCGGCGCATCTTTTCGAAGTAA 688
||||||.|||||.||||||||.||.||..|.||..||.||.||.|.||.|
BL00074___ygx 639 TCTCATTCATTCAAAAGCCGAAATAGGGGCTGCCTATATTCTCAATGTCA 688
BSNT_01449___ 689 TGAAAGAAAAAGACATTTGGCAATTCGGTGAGCTTCTTCAACATCATGAC 738
||.|.||||||....||||||||||.|..||.||||||.||||||..||.
BL00074___ygx 689 TGGATGAAAAATCGGTTTGGCAATTTGCCGAACTTCTTAAACATCCGGAT 738
BSNT_01449___ 739 CTAAAGCACTTTACCCAAGATCTTGGCGTTATGCTTGATTACTTGACAGA 788
||.|||.|.||.||...|||.||.||.|||||.||.||.|.||||.|.||
BL00074___ygx 739 CTCAAGTATTTCACGACAGACCTGGGAGTTATACTGGAGTTCTTGGCTGA 788
BSNT_01449___ 789 AAAGGGACTTATCAACGTC-------TGCCAGATAGAAACGAAAGG---- 827
||| |||.||| ||| .||| ||||||.|| |||||
BL00074___ygx 789 AAA-GGATTTA-----GTCGGAGTAAAGCC-GATAGAGAC-AAAGGGCCA 830
BSNT_01449___ 828 ACAGGCTGTCTATCACCGAGGATATTCTTTTAAAAAAGGTGTTGACTCTG 877
|.|| .|.|.||||||||||||||.|.||||||||.||||||||.||.
BL00074___ygx 831 AAAG---ATTTTTCACCGAGGATATTTTATTAAAAAAAGTGTTGACACTA 877
BSNT_01449___ 878 ATTCTTGA 885
|||..|.|
BL00074___ygx 878 ATTTATAA 885
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