Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01449 and BL00074

See Amino acid alignment / Visit BSNT_01449 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_01449___ygxA.1.5803.seq
#    -bsequence dna-align/BL00074___ygxA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01449___ygxA-BL00074___ygxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01449___ygxA-BL00074___ygxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01449___ygxA
# 2: BL00074___ygxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 908
# Identity:     660/908 (72.7%)
# Similarity:   660/908 (72.7%)
# Gaps:          46/908 ( 5.1%)
# Score: 2326.5
# 
#
#=======================================

BSNT_01449___      1 ATGGAAAATCTTCTCCGTCCAATTTACCAAGAAAGAGCAAGTCACCCCAA     50
                     ||||||||||||||||||||.||||||||||||||||||||.|.|||..|
BL00074___ygx      1 ATGGAAAATCTTCTCCGTCCGATTTACCAAGAAAGAGCAAGCCGCCCTGA     50

BSNT_01449___     51 TACATTGGCTGTCATTATGATTGAGAGAAGAAACAAAACATCTTCCTTAA    100
                     .|||.|.||||||||..||||||||||.|||||..||||.||.||...||
BL00074___ygx     51 CACACTCGCTGTCATGCTGATTGAGAGGAGAAATCAAACTTCATCTGCAA    100

BSNT_01449___    101 CAGATAACTTTGATGCAGCTTTGCTGGTGATTGTAAAGGATGCTGATGAG    150
                     |||||||.||||||||.||.|||.||.|.||.||.||..|.|||||.||.
BL00074___ygx    101 CAGATAATTTTGATGCGGCATTGTTGATTATCGTTAATAAGGCTGAAGAC    150

BSNT_01449___    151 CCAGTTTTTATAAAGCATTATGAATTTGATCATC----AAACAGCTTCTT    196
                     ||.||.||..|.|||||||||||.||.||    |    ||||.||||||.
BL00074___ygx    151 CCTGTATTCGTGAAGCATTATGAGTTCGA----CGGAAAAACGGCTTCTC    196

BSNT_01449___    197 TGCATGTGGTAACAGATTCT------CAGATTCAAGAATGGATTTTGCTT    240
                     |.|||.|..|      ||||      |||.||||.|||||||||.|||||
BL00074___ygx    197 TTCATATTAT------TTCTGTTGAACAGCTTCAGGAATGGATTCTGCTT    240

BSNT_01449___    241 GGAACAAATAGAAGAATCATAGATTGGATTGTAAATGGCAGAGT-CTTGT    289
                     ||||||||.||.|||||||||||.|||.||.|.|||||.|..|| ||| |
BL00074___ygx    241 GGAACAAACAGGAGAATCATAGACTGGGTTCTCAATGGAAAGGTGCTT-T    289

BSNT_01449___    290 TTGACCGTAATGAATACGTAGTTGAACTGATTGA-CAGGCTGAATACATT    338
                     |.|||||.||.||||...|.|...|.|||||||| || |||.||||||||
BL00074___ygx    290 TCGACCGAAACGAATTTATCGCCAAGCTGATTGAGCA-GCTCAATACATT    338

BSNT_01449___    339 TCCGTTTGCCGAACGTAAACTGAAGATCGGACTCGAATACGGCAAATTAA    388
                     |||||||.|.|||.|.|||||.||.||||||||.||||||||.|||||||
BL00074___ygx    339 TCCGTTTTCAGAAAGAAAACTAAAAATCGGACTTGAATACGGGAAATTAA    388

BSNT_01449___    389 TCAGAAGGTATGTTGAAGGGAAAGCTTTTTTTGAAGCCAATCAATTTTTA    438
                     |||||||.|||.|.|||||.|||.|.||||||||.|.|..|||||||||.
BL00074___ygx    389 TCAGAAGATATATAGAAGGAAAATCGTTTTTTGAGGACGGTCAATTTTTG    438

BSNT_01449___    439 GATGCCTACAACGCCGTTGTTCATGCGCTGCATCATTTAGCACGTATTGA    488
                     |||||||||||..||.|.||.||.||.||.||.|||||.||..|.||.||
BL00074___ygx    439 GATGCCTACAATTCCATCGTACACGCCCTCCACCATTTGGCCAGAATCGA    488

BSNT_01449___    489 AGTAATCGACAGAGGATTCCATCCCGAAACCACGGTGTGGAGCCAAGTGC    538
                     |||.|||||.|..||.||.||.||.|||...|||||.||||.||||||.|
BL00074___ygx    489 AGTGATCGATAAGGGGTTTCACCCTGAAGTTACGGTATGGAACCAAGTCC    538

BSNT_01449___    539 GCCAGATGGAGCCGCAAGTGTACAAGTTATATTCCGAGCTGATTGAAAGT    588
                     ||||.|||||.||.||.||.||.||.||.|||...||..|.||||||||.
BL00074___ygx    539 GCCACATGGAACCTCAGGTTTATAAATTGTATAAGGAATTAATTGAAAGC    588

BSNT_01449___    589 CACGAGAGCCTGGAAAAAAGACTTGAATTATTATTCTTAGCAAATGATTT    638
                     .|.||.|||.||.|||||.|.||.||.|||||||||.|.||||..|||||
BL00074___ygx    589 AATGAAAGCTTGCAAAAACGGCTGGAGTTATTATTCCTCGCAAGCGATTT    638

BSNT_01449___    639 TCTCATCCATTCCAAAGCCGAGATCGGTTCGGCGCATCTTTTCGAAGTAA    688
                     ||||||.|||||.||||||||.||.||..|.||..||.||.||.|.||.|
BL00074___ygx    639 TCTCATTCATTCAAAAGCCGAAATAGGGGCTGCCTATATTCTCAATGTCA    688

BSNT_01449___    689 TGAAAGAAAAAGACATTTGGCAATTCGGTGAGCTTCTTCAACATCATGAC    738
                     ||.|.||||||....||||||||||.|..||.||||||.||||||..||.
BL00074___ygx    689 TGGATGAAAAATCGGTTTGGCAATTTGCCGAACTTCTTAAACATCCGGAT    738

BSNT_01449___    739 CTAAAGCACTTTACCCAAGATCTTGGCGTTATGCTTGATTACTTGACAGA    788
                     ||.|||.|.||.||...|||.||.||.|||||.||.||.|.||||.|.||
BL00074___ygx    739 CTCAAGTATTTCACGACAGACCTGGGAGTTATACTGGAGTTCTTGGCTGA    788

BSNT_01449___    789 AAAGGGACTTATCAACGTC-------TGCCAGATAGAAACGAAAGG----    827
                     ||| |||.|||     |||       .||| ||||||.|| |||||    
BL00074___ygx    789 AAA-GGATTTA-----GTCGGAGTAAAGCC-GATAGAGAC-AAAGGGCCA    830

BSNT_01449___    828 ACAGGCTGTCTATCACCGAGGATATTCTTTTAAAAAAGGTGTTGACTCTG    877
                     |.||   .|.|.||||||||||||||.|.||||||||.||||||||.||.
BL00074___ygx    831 AAAG---ATTTTTCACCGAGGATATTTTATTAAAAAAAGTGTTGACACTA    877

BSNT_01449___    878 ATTCTTGA    885
                     |||..|.|
BL00074___ygx    878 ATTTATAA    885


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