Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04352 and BL00072

See Amino acid alignment / Visit BSNT_04352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:30
# Commandline: needle
#    -asequence dna-align/BSNT_04352___ytzB.1.5803.seq
#    -bsequence dna-align/BL00072___ytzB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04352___ytzB-BL00072___ytzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04352___ytzB-BL00072___ytzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04352___ytzB
# 2: BL00072___ytzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     245/326 (75.2%)
# Similarity:   245/326 (75.2%)
# Gaps:          19/326 ( 5.8%)
# Score: 914.5
# 
#
#=======================================

BSNT_04352___      1 TTGAAATTGCGTCATCTTCTTTTAGGAGCAGGACTTGGAATTTGTGCGGC     50
                     .|||||.||||.||..|||||.|.|||||.||..|.||.|||...|||||
BL00072___ytz      1 ATGAAACTGCGCCACTTTCTTATTGGAGCCGGCATCGGCATTGCCGCGGC     50

BSNT_04352___     51 TGTCGTTGTGAAACAATATGTGATGAAGCCTTATATTTCTTCAGAAAAAG    100
                     .||||||||.|||||||||||.|||.|||||||.||||||||.|||||||
BL00072___ytz     51 CGTCGTTGTCAAACAATATGTCATGCAGCCTTACATTTCTTCTGAAAAAG    100

BSNT_04352___    101 CGCTTCGAATTGTAAAATCTGCTTTTAAGCAGCGGGGCCCGATTGACGGA    150
                     ||||.||.||.||.||.||.||||||||.|||.|.||||||||.|||||.
BL00072___ytz    101 CGCTGCGCATCGTCAAGTCCGCTTTTAAACAGAGAGGCCCGATCGACGGT    150

BSNT_04352___    151 TCATGGATTTACACCCAGCCGG-AGCCT-TACAATATTAACGGAGAAACG    198
                     ||||||||.||.|||...|||| ||||| |||..||  |||||.|||||.
BL00072___ytz    151 TCATGGATATATACCGTTCCGGAAGCCTATACCGTA--AACGGCGAAACC    198

BSNT_04352___    199 GTACA-GGTATACAAAACCGGCATTACACGATCAGCTTTCGGAGAATTAG    247
                     || || |||.||||||||.||||||||.||.||.||||||.||||..|.|
BL00072___ytz    199 GT-CATGGTGTACAAAACAGGCATTACGCGTTCCGCTTTCCGAGAGCTCG    247

BSNT_04352___    248 AACAGTATGAAGTCATGGTGGATGCGAAAACGGGAGAAATTGTTGATGTC    297
                     |||||||.|||||||||||.|||||.|||||.||....||.||.|||||.
BL00072___ytz    248 AACAGTACGAAGTCATGGTTGATGCAAAAACAGGCATGATCGTAGATGTA    297

BSNT_04352___    298 ATTGATACA-----ATCGCCTCTTAA    318
                     |||||||||     ||.|        
BL00072___ytz    298 ATTGATACAGCAGCATAG--------    315


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