Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04360 and BL00071

See Amino acid alignment / Visit BSNT_04360 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence dna-align/BSNT_04360___ytzH.1.5803.seq
#    -bsequence dna-align/BL00071___ytzH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04360___ytzH-BL00071___ytzH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04360___ytzH-BL00071___ytzH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04360___ytzH
# 2: BL00071___ytzH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     187/283 (66.1%)
# Similarity:   187/283 (66.1%)
# Gaps:           8/283 ( 2.8%)
# Score: 560.0
# 
#
#=======================================

BSNT_04360___      1 ATGGGTTTACATTATGAGCATCAAGTTCATTTATTGAAGGATATATTGAC     50
                     |||||.|||.||.|..|..||||..|||||.||||.||.||.||..|..|
BL00071___ytz      1 ATGGGCTTAAATCAGCAAAATCAGATTCATCTATTAAAAGACATTCTCTC     50

BSNT_04360___     51 TGACCATCAATTGGACTGCTGCGGAACAGTCGCAGAGTACGAGCAGCTTG    100
                     .|||||||||...||||||..||||||.|||||.||.|.|||.|||.|.|
BL00071___ytz     51 AGACCATCAAGCAGACTGCACCGGAACCGTCGCTGAATGCGAACAGATGG    100

BSNT_04360___    101 AGCGTGTGATTAAATCACTGATGGCAAACACCGAGCTTGATTCAAATTTC    150
                     ||||..|.||.||.||..|.|||||||||||..|.|||||..|....||.
BL00071___ytz    101 AGCGGATTATCAAGTCTTTAATGGCAAACACGAATCTTGACGCCGGCTTG    150

BSNT_04360___    151 AAAAACGTGCTTGAAGATGTTTACCGCTACAGCCAATCAGGAATATCGTC    200
                     |||..|||..|.|||||..||||....||||||||....||||.|||.||
BL00071___ytz    151 AAAGGCGTTTTGGAAGACATTTATTTGTACAGCCAGAAGGGAAGATCTTC    200

BSNT_04360___    201 CAAATCCATCGACTCACACATACAAGAGCATCAGAACAGCCTGTCT----    246
                     |...||.|||.||...|||||.||.|||||.|||    |..|.|||    
BL00071___ytz    201 CGCTTCGATCAACAACCACATTCAGGAGCACCAG----GATTATCTCACG    246

BSNT_04360___    247 CAATGGGTAGAGCAAATGGATTCGTATTCCTGA    279
                     ||||||||.||..|.||.||.||.|.|||.|||
BL00071___ytz    247 CAATGGGTGGAAGATATCGACTCATTTTCATGA    279


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