Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04368 and BL00070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_04368___ytkP.1.5803.seq
# -bsequence dna-align/BL00070___ytkP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04368___ytkP-BL00070___ytkP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04368___ytkP-BL00070___ytkP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04368___ytkP
# 2: BL00070___ytkP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 947
# Identity: 709/947 (74.9%)
# Similarity: 709/947 (74.9%)
# Gaps: 25/947 ( 2.6%)
# Score: 2558.5
#
#
#=======================================
BSNT_04368___ 1 ATGTTGAAAATCGTTGCAAACACAGCTGATCTGATAGGAGATACACCGCT 50
.|||.|..||||..|||.|..||.||..|.||.||.||.||.||.||
BL00070___ytk 1 ---GTGAGAGCCGTTCAAAATATTGCAGAATTAATCGGGGAAACGCCCCT 47
BSNT_04368___ 51 AGTGAGATTGAATCGGCTTCAGCCGGAAAATGCGGCACAAGTCTATTTGA 100
.||.|..|||||.||..|||||||.|||||.|||||.|||||.|||.|.|
BL00070___ytk 48 TGTCAAGTTGAACCGCGTTCAGCCCGAAAACGCGGCCCAAGTTTATATCA 97
BSNT_04368___ 101 AGCTTGAATTTTTCAATCCGAGCGGCAGTGTGAAAGACAGAGCCGCTTAT 150
|||||||||.|||.|||||||||||.||.||.||||||.|.||.||.||.
BL00070___ytk 98 AGCTTGAATCTTTTAATCCGAGCGGAAGCGTAAAAGACCGCGCGGCCTAC 147
BSNT_04368___ 151 CAAATGATCATAGAAGCTGAACAAAACGGTTTACTCAAGCCGGGATCAGT 200
|||||||||.|.||.||.|||.||||.||..|.||.||.|||||.|||..
BL00070___ytk 148 CAAATGATCCTGGATGCCGAAGAAAAAGGCCTGCTGAAACCGGGTTCAAC 197
BSNT_04368___ 201 TATTATAGAGCCGACAAGCGGAAATACCGGAATCGGGCTCGCCATGAATG 250
.||.||.||.|||||.|||||.||.|||||.|||||.||.||.|||||.|
BL00070___ytk 198 CATCATTGAACCGACGAGCGGGAACACCGGCATCGGCCTTGCGATGAACG 247
BSNT_04368___ 251 CGGCAGCACGCGGATATAAAG-CAATCTTAGTTATGCCTGATACGATGAC 299
||||.|||.|.||.||.|||| ||.|||| ||.|||||||||||||||||
BL00070___ytk 248 CGGCGGCAAGAGGCTACAAAGCCATTCTT-GTCATGCCTGATACGATGAC 296
BSNT_04368___ 300 GAAGGAACGGATCAACCTGCTTAAAGCTTACGGTGCAGAGGTTGTATTAA 349
||||||.||||||||.||.||.|||||.|||||.||.||.||.||..|.|
BL00070___ytk 297 GAAGGAGCGGATCAATCTTCTGAAAGCGTACGGAGCCGAAGTCGTCCTGA 346
BSNT_04368___ 350 CTCCCGGAGAGGAAAGAATGCCGGGCAGCATCAAAAAAGCGAAGGAGCTT 399
|.||.||.||.||||||||||||||||||||||||||||||.|||||||.
BL00070___ytk 347 CGCCGGGGGATGAAAGAATGCCGGGCAGCATCAAAAAAGCGCAGGAGCTC 396
BSNT_04368___ 400 GC-CGAACAAATTCCGAACAGCTATATTCCAATGCAGTTCGATAACACTG 448
|| || .|||||.||...|||||.||||||.||||||||.|||||....|
BL00070___ytk 397 GCTCG-GCAAATCCCAGGCAGCTTTATTCCGATGCAGTTTGATAATGAAG 445
BSNT_04368___ 449 CTAATCCTGATGCGCACCGGAAAACAACAGCGCCTGAAATCGCCCGGGCA 498
|.|||||.||.||.|||||||.|.||||.||.|..|||||.|||||||||
BL00070___ytk 446 CCAATCCGGAGGCTCACCGGAGATCAACCGCTCTGGAAATTGCCCGGGCA 495
BSNT_04368___ 499 ATAGAGGAAATCGGAAAACCGCTCGGCGCTTTTGTCGCCTCCTCTGGAAC 548
|||||.||||||||.|||||.||||..||.|||||.||..|..|.||.||
BL00070___ytk 496 ATAGAAGAAATCGGCAAACCTCTCGCTGCATTTGTTGCAACAGCAGGGAC 545
BSNT_04368___ 549 GGGCGGAACCATTACCGGAACAGGTGAGGCGCTCAAAGAGCTT--TTTCC 596
.||.|||||.||||||||||||||.||...|||.|| ||||| |||||
BL00070___ytk 546 AGGGGGAACGATTACCGGAACAGGCGAAAAGCTGAA--AGCTTTATTTCC 593
BSNT_04368___ 597 GGATATCACGGTTCATGTTGTTGAGCCAGCGGGTTCGCCTGTATTATCCG 646
||..||.||.|||||.||.|..||.||.||.||.||||||||.|||||||
BL00070___ytk 594 GGGAATAACCGTTCACGTGGCAGAACCTGCAGGGTCGCCTGTTTTATCCG 643
BSNT_04368___ 647 GCGGAAAACCTGGCGCGCATAAACTTGTAGGAACGAGCCCAGGCTTTATA 696
||||.|||||.||....||.||.|||||.||.||.|||||.||.|||||.
BL00070___ytk 644 GCGGCAAACCCGGAAAACACAAGCTTGTCGGGACAAGCCCGGGATTTATC 693
BSNT_04368___ 697 CCGCCGATTTTAAATGAAGACGTTTATGATGAAATTATCAAAATCTCTGA 746
||....||||||||.|||.||||.|||||.|||||..|.||.|||...||
BL00070___ytk 694 CCAAACATTTTAAACGAAAACGTCTATGACGAAATCTTAAAGATCAAGGA 743
BSNT_04368___ 747 TGAAGACGCGTATACGACGACAAGACG----GCTTGCTGC-TGAAGAAGG 791
||||||.||.||| ||.|.|||| |.|||..|| .||||||||
BL00070___ytk 744 TGAAGAAGCCTAT-----GAGATGACGCGCAGATTGGCGCGGGAAGAAGG 788
BSNT_04368___ 792 AATTCTTGTCGGTCCTTCATCAGGCGCTGCCTGCTTCGCGGCAATCGAAA 841
|||.||||||||.|||||.|||||.||.||.||||||||.||..|.||||
BL00070___ytk 789 AATCCTTGTCGGCCCTTCTTCAGGAGCCGCTTGCTTCGCTGCTGTTGAAA 838
BSNT_04368___ 842 CAGCGAA-ACGCCTCTCTCCTGACAAAGTTGTGGTCTGCATGACAGCTGA 890
|.||.|| |.| |||.||||.||||||||.||.|||||||||||.||.||
BL00070___ytk 839 CGGCCAAGAAG-CTCCCTCCCGACAAAGTGGTCGTCTGCATGACGGCCGA 887
BSNT_04368___ 891 TACAGGAGAACGGTACTTATCAACTGATTTATGGTC-ATTTATTTAA 936
||||||.|||||.||.|||||||..||||||| .|| ||||..||||
BL00070___ytk 888 TACAGGGGAACGCTATTTATCAAGCGATTTAT-TTCAATTTGATTAA 933
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