Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04370 and BL00069
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_04370___ytiP.1.5803.seq
# -bsequence dna-align/BL00069___pbuO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04370___ytiP-BL00069___pbuO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04370___ytiP-BL00069___pbuO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04370___ytiP
# 2: BL00069___pbuO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1333
# Identity: 987/1333 (74.0%)
# Similarity: 987/1333 (74.0%)
# Gaps: 59/1333 ( 4.4%)
# Score: 3524.5
#
#
#=======================================
BSNT_04370___ 1 ATGTTTCATCTAAAAGAGCAGCAAACATCCATAAAGCAAGAAATCATAGC 50
||||||.|..|||||||..|.|||||..|..|.||..||||||||.|.||
BL00069___pbu 1 ATGTTTAACATAAAAGAAAACCAAACCACAGTCAAAAAAGAAATCCTCGC 50
BSNT_04370___ 51 AGGGCTGACGACCTTTTTCACAATGGTCTATATCGTCGTGGTCAATCCG- 99
.||..|.||.|||||.||.||||||||.|||||||||||||||||.|||
BL00069___pbu 51 CGGTATTACAACCTTCTTTACAATGGTTTATATCGTCGTGGTCAACCCGA 100
BSNT_04370___ 100 GT---CATTCTGGCTAACGCCGGGGTTCCTTTCGACCAGGTGTTCACCGC 146
|| |.|||.|| |.|.||.||.||.||.||.||.||||||||.||
BL00069___pbu 101 GTATCCTTTCCGG----CACAGGCGTCCCGTTTGATCAAGTGTTCACTGC 146
BSNT_04370___ 147 AACGATTATTGCCTCCA-TTGTCGGAACGCTGTGGATGGCCCTGGCAGCA 195
.||.||.||.| ||.|| |.|||||||||||.||||||||.||.||.||.
BL00069___pbu 147 CACAATCATCG-CTGCAGTCGTCGGAACGCTTTGGATGGCGCTTGCCGCC 195
BSNT_04370___ 196 AATTATCCGATTGCTATTGCGCCCGGCATGGGCTTGAACGCTTATTTAGC 245
||.|.||||||.||.|||||.|||||.|||||..||||||..|||||.||
BL00069___pbu 196 AACTTTCCGATCGCGATTGCACCCGGGATGGGACTGAACGTGTATTTTGC 245
BSNT_04370___ 246 -CTTTCATGTCGTAAGCGCAAGCGATGGCGGCATCACGTACGCA-ACAGC 293
.|.||| |||||..||.||..|.|.||||..||..|.|| .|| ||.||
BL00069___pbu 246 AGTGTCA-GTCGTCGGCTCATCCAACGGCGAAATTTCTTA-TCAGACGGC 293
BSNT_04370___ 294 TTTCAGCGCAGTATTTACAGCAGGGGTTCTCTTCATTATTCTATCGTTAA 343
.||||||.||||.||..|.||.||..|||||||.|||||..|||||.|||
BL00069___pbu 294 GTTCAGCACAGTCTTCGCGGCCGGCATTCTCTTTATTATCTTATCGCTAA 343
BSNT_04370___ 344 CGCCTTTAAGAAAACAACTTATAGAAGCGATTCCAAACAATTTAAAATAC 393
|.|||.|.|||||||||||.||.|||||||||||....||||||||||||
BL00069___pbu 344 CACCTCTTAGAAAACAACTGATCGAAGCGATTCCGGCTAATTTAAAATAC 393
BSNT_04370___ 394 GGGATCACAACTGGGATCGGGCTGTTTATTGCTTTTATCGGTTTGCGTCA 443
||.||.||..|.||.|||||..|||||||.||||||.|||||.||.|...
BL00069___pbu 394 GGAATTACCGCCGGAATCGGATTGTTTATCGCTTTTGTCGGTCTGAGAGG 443
BSNT_04370___ 444 AGCGGGCATTGTGGCAGCTGATGAGTCAAACCTGGTCACTCTCGGCAATC 493
|||.|||||..|..|.||..|.||..|.||..|||||...||||||||||
BL00069___pbu 444 AGCCGGCATCATTACCGCGAACGAAGCCAATTTGGTCGGACTCGGCAATC 493
BSNT_04370___ 494 TGCATTCACCTGGTGTTAT------CTTAA-CGCTGGTTGGCCTTTTGAT 536
||||.||.||.||.||.|| .|||| || |.|||||.||.|
BL00069___pbu 494 TGCACTCGCCCGGAGTGATACTGGCATTAATCG--GCTTGGCTTTCT--- 538
BSNT_04370___ 537 CAGC-GTGGTCCTGATGGTGCTGAATGTAAGCGGCGCTTTATTTATCGGA 585
| ||.||..||||||||.|||||||.|||||||||.|||||.||||.
BL00069___pbu 539 ---CTGTCGTTTTGATGGTGATGAATGTGAGCGGCGCTCTATTTTTCGGT 585
BSNT_04370___ 586 ATGGCAGCT--ACCGCTTTGATCGCCTTTTTCACCGGTCAGCTCCA-TTT 632
||| |.|| ||||...|||||||||||||.|||||.|||||..| |||
BL00069___pbu 586 ATG--ATCTTAACCGGGCTGATCGCCTTTTTTACCGGCCAGCTTGAGTTT 633
BSNT_04370___ 633 TCCAAAGGGATTTATGTCGCTTCCTCATTTGCCGGAAGGATTGATGATCT 682
.||||||||| ||||||||.|.||||||.||||||||..|.||||..||.
BL00069___pbu 634 ACCAAAGGGA-TTATGTCGATGCCTCATCTGCCGGAAAAACTGATCGTCA 682
BSNT_04370___ 683 CAAATCCATTTACCGCTTTTGGCGATGTCATTCATCACGGCCTGTACGCT 732
||||.||.||..|||||||||||||||||||.||..|||||||.||..|.
BL00069___pbu 683 CAAACCCTTTCGCCGCTTTTGGCGATGTCATCCACTACGGCCTTTATTCG 732
BSNT_04370___ 733 GTCGTCTTTTCTTTTCTATTAGTCACCATTTTTGATACGACAGGCACGAT 782
||.||||||||.|||||..|.||.||.|||||||||||||||||.|||||
BL00069___pbu 733 GTTGTCTTTTCGTTTCTGCTCGTGACGATTTTTGATACGACAGGAACGAT 782
BSNT_04370___ 783 GATCGGAGTTGCCGAGCAAGCCGGGCTGATGAAAAACAACAAGCTGCCTA 832
||||||.||.||.|||||||||||.||.||||||||||||||.|||||.|
BL00069___pbu 783 GATCGGTGTCGCTGAGCAAGCCGGACTCATGAAAAACAACAAACTGCCGA 832
BSNT_04370___ 833 ACGTGC--GAAAAGCGCTGCTTGCTGATTCAACAGCGACGACAGTAGGAG 880
| ||| |||||||.||.|||||.|||||.||||||||||||||.||.|
BL00069___pbu 833 A--TGCAAGAAAAGCCCTCCTTGCCGATTCTACAGCGACGACAGTCGGTG 880
BSNT_04370___ 881 CTGTTTTCGGCACAAGTCCGACGACCGCATTTATCGAATCTTCCGCCGGT 930
|..|.|||||.|||||||||||||||||.|.|||||||||.||||||||.
BL00069___pbu 881 CAATGTTCGGGACAAGTCCGACGACCGCCTATATCGAATCATCCGCCGGG 930
BSNT_04370___ 931 GTCGCAGCCGGGGGAAGAACGGGGCTTACGGCTTTGACTGTCGCGGTGAT 980
||.||.||.||.||||||||||||||||||.||||.||.|||||.|||.|
BL00069___pbu 931 GTGGCCGCAGGCGGAAGAACGGGGCTTACGTCTTTAACAGTCGCTGTGCT 980
BSNT_04370___ 981 GTTT----GCGGCTTCAATGTTTTTCAGTCCGCTTGTCAGCGCCTTGTCC 1026
||| |||| |..||||||||||.|||||||||||.||..|.|||
BL00069___pbu 981 -TTTCGGCGCGG---CCCTGTTTTTCAGCCCGCTTGTCAGTGCGGTCTCC 1026
BSNT_04370___ 1027 GGTATAGCCGCCATCACCTCGCCTGCTTTGATTATCGTCGGCAGCTTGAT 1076
||.||.||.||.||.||.|||||.||.|||||.||.||.||.|||.||||
BL00069___pbu 1027 GGAATCGCAGCGATTACGTCGCCGGCATTGATCATTGTAGGAAGCATGAT 1076
BSNT_04370___ 1077 GATGGGCTCGGTTTCCAATATGAACTGGAAAGAGATGGACGAGGCATTTC 1126
|||.|||.|.||..|.||.||...|||||||||..|.|||||.|||||||
BL00069___pbu 1077 GATCGGCGCCGTGACGAACATCCGCTGGAAAGAACTTGACGAAGCATTTC 1126
BSNT_04370___ 1127 CAGCGTTTCTCGTCATTCTGGCCATGCCTTTGACATCCAGC-ATTTCTAC 1175
|.||.|||||||||||..||.|.|||||..|||||| ||.| |||.|.||
BL00069___pbu 1127 CGGCCTTTCTCGTCATCTTGACAATGCCGCTGACAT-CATCTATTGCGAC 1175
BSNT_04370___ 1176 AGGAATTGCGCTTGGCTTTATTTCATATCCGATCGTAAAAGCGGCGCGGG 1225
|||.|||.|.||.||.|||||..|.||||||||.||.|||||.|||...|
BL00069___pbu 1176 AGGCATTTCCCTCGGGTTTATCGCTTATCCGATTGTGAAAGCCGCGAAAG 1225
BSNT_04370___ 1226 GAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTT 1275
|.||||||.|.||||||||||||||.|||.||||.||.||..||||.|||
BL00069___pbu 1226 GCAAATGGCGCGAGATTCATCCGCTTGTCTTCGTGTTTGCTGTTCTCTTT 1275
BSNT_04370___ 1276 TTCATCCAGCTGTTTATTTTATAA--------- 1299
|||||.||.||.||..||||..||
BL00069___pbu 1276 TTCATACACCTTTTCTTTTTGGAAGGGCATTAA 1308
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