Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04370 and BL00069

See Amino acid alignment / Visit BSNT_04370 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence dna-align/BSNT_04370___ytiP.1.5803.seq
#    -bsequence dna-align/BL00069___pbuO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04370___ytiP-BL00069___pbuO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04370___ytiP-BL00069___pbuO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04370___ytiP
# 2: BL00069___pbuO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1333
# Identity:     987/1333 (74.0%)
# Similarity:   987/1333 (74.0%)
# Gaps:          59/1333 ( 4.4%)
# Score: 3524.5
# 
#
#=======================================

BSNT_04370___      1 ATGTTTCATCTAAAAGAGCAGCAAACATCCATAAAGCAAGAAATCATAGC     50
                     ||||||.|..|||||||..|.|||||..|..|.||..||||||||.|.||
BL00069___pbu      1 ATGTTTAACATAAAAGAAAACCAAACCACAGTCAAAAAAGAAATCCTCGC     50

BSNT_04370___     51 AGGGCTGACGACCTTTTTCACAATGGTCTATATCGTCGTGGTCAATCCG-     99
                     .||..|.||.|||||.||.||||||||.|||||||||||||||||.||| 
BL00069___pbu     51 CGGTATTACAACCTTCTTTACAATGGTTTATATCGTCGTGGTCAACCCGA    100

BSNT_04370___    100 GT---CATTCTGGCTAACGCCGGGGTTCCTTTCGACCAGGTGTTCACCGC    146
                     ||   |.|||.||    |.|.||.||.||.||.||.||.||||||||.||
BL00069___pbu    101 GTATCCTTTCCGG----CACAGGCGTCCCGTTTGATCAAGTGTTCACTGC    146

BSNT_04370___    147 AACGATTATTGCCTCCA-TTGTCGGAACGCTGTGGATGGCCCTGGCAGCA    195
                     .||.||.||.| ||.|| |.|||||||||||.||||||||.||.||.||.
BL00069___pbu    147 CACAATCATCG-CTGCAGTCGTCGGAACGCTTTGGATGGCGCTTGCCGCC    195

BSNT_04370___    196 AATTATCCGATTGCTATTGCGCCCGGCATGGGCTTGAACGCTTATTTAGC    245
                     ||.|.||||||.||.|||||.|||||.|||||..||||||..|||||.||
BL00069___pbu    196 AACTTTCCGATCGCGATTGCACCCGGGATGGGACTGAACGTGTATTTTGC    245

BSNT_04370___    246 -CTTTCATGTCGTAAGCGCAAGCGATGGCGGCATCACGTACGCA-ACAGC    293
                      .|.||| |||||..||.||..|.|.||||..||..|.|| .|| ||.||
BL00069___pbu    246 AGTGTCA-GTCGTCGGCTCATCCAACGGCGAAATTTCTTA-TCAGACGGC    293

BSNT_04370___    294 TTTCAGCGCAGTATTTACAGCAGGGGTTCTCTTCATTATTCTATCGTTAA    343
                     .||||||.||||.||..|.||.||..|||||||.|||||..|||||.|||
BL00069___pbu    294 GTTCAGCACAGTCTTCGCGGCCGGCATTCTCTTTATTATCTTATCGCTAA    343

BSNT_04370___    344 CGCCTTTAAGAAAACAACTTATAGAAGCGATTCCAAACAATTTAAAATAC    393
                     |.|||.|.|||||||||||.||.|||||||||||....||||||||||||
BL00069___pbu    344 CACCTCTTAGAAAACAACTGATCGAAGCGATTCCGGCTAATTTAAAATAC    393

BSNT_04370___    394 GGGATCACAACTGGGATCGGGCTGTTTATTGCTTTTATCGGTTTGCGTCA    443
                     ||.||.||..|.||.|||||..|||||||.||||||.|||||.||.|...
BL00069___pbu    394 GGAATTACCGCCGGAATCGGATTGTTTATCGCTTTTGTCGGTCTGAGAGG    443

BSNT_04370___    444 AGCGGGCATTGTGGCAGCTGATGAGTCAAACCTGGTCACTCTCGGCAATC    493
                     |||.|||||..|..|.||..|.||..|.||..|||||...||||||||||
BL00069___pbu    444 AGCCGGCATCATTACCGCGAACGAAGCCAATTTGGTCGGACTCGGCAATC    493

BSNT_04370___    494 TGCATTCACCTGGTGTTAT------CTTAA-CGCTGGTTGGCCTTTTGAT    536
                     ||||.||.||.||.||.||      .|||| ||  |.|||||.||.|   
BL00069___pbu    494 TGCACTCGCCCGGAGTGATACTGGCATTAATCG--GCTTGGCTTTCT---    538

BSNT_04370___    537 CAGC-GTGGTCCTGATGGTGCTGAATGTAAGCGGCGCTTTATTTATCGGA    585
                        | ||.||..||||||||.|||||||.|||||||||.|||||.||||.
BL00069___pbu    539 ---CTGTCGTTTTGATGGTGATGAATGTGAGCGGCGCTCTATTTTTCGGT    585

BSNT_04370___    586 ATGGCAGCT--ACCGCTTTGATCGCCTTTTTCACCGGTCAGCTCCA-TTT    632
                     |||  |.||  ||||...|||||||||||||.|||||.|||||..| |||
BL00069___pbu    586 ATG--ATCTTAACCGGGCTGATCGCCTTTTTTACCGGCCAGCTTGAGTTT    633

BSNT_04370___    633 TCCAAAGGGATTTATGTCGCTTCCTCATTTGCCGGAAGGATTGATGATCT    682
                     .||||||||| ||||||||.|.||||||.||||||||..|.||||..||.
BL00069___pbu    634 ACCAAAGGGA-TTATGTCGATGCCTCATCTGCCGGAAAAACTGATCGTCA    682

BSNT_04370___    683 CAAATCCATTTACCGCTTTTGGCGATGTCATTCATCACGGCCTGTACGCT    732
                     ||||.||.||..|||||||||||||||||||.||..|||||||.||..|.
BL00069___pbu    683 CAAACCCTTTCGCCGCTTTTGGCGATGTCATCCACTACGGCCTTTATTCG    732

BSNT_04370___    733 GTCGTCTTTTCTTTTCTATTAGTCACCATTTTTGATACGACAGGCACGAT    782
                     ||.||||||||.|||||..|.||.||.|||||||||||||||||.|||||
BL00069___pbu    733 GTTGTCTTTTCGTTTCTGCTCGTGACGATTTTTGATACGACAGGAACGAT    782

BSNT_04370___    783 GATCGGAGTTGCCGAGCAAGCCGGGCTGATGAAAAACAACAAGCTGCCTA    832
                     ||||||.||.||.|||||||||||.||.||||||||||||||.|||||.|
BL00069___pbu    783 GATCGGTGTCGCTGAGCAAGCCGGACTCATGAAAAACAACAAACTGCCGA    832

BSNT_04370___    833 ACGTGC--GAAAAGCGCTGCTTGCTGATTCAACAGCGACGACAGTAGGAG    880
                     |  |||  |||||||.||.|||||.|||||.||||||||||||||.||.|
BL00069___pbu    833 A--TGCAAGAAAAGCCCTCCTTGCCGATTCTACAGCGACGACAGTCGGTG    880

BSNT_04370___    881 CTGTTTTCGGCACAAGTCCGACGACCGCATTTATCGAATCTTCCGCCGGT    930
                     |..|.|||||.|||||||||||||||||.|.|||||||||.||||||||.
BL00069___pbu    881 CAATGTTCGGGACAAGTCCGACGACCGCCTATATCGAATCATCCGCCGGG    930

BSNT_04370___    931 GTCGCAGCCGGGGGAAGAACGGGGCTTACGGCTTTGACTGTCGCGGTGAT    980
                     ||.||.||.||.||||||||||||||||||.||||.||.|||||.|||.|
BL00069___pbu    931 GTGGCCGCAGGCGGAAGAACGGGGCTTACGTCTTTAACAGTCGCTGTGCT    980

BSNT_04370___    981 GTTT----GCGGCTTCAATGTTTTTCAGTCCGCTTGTCAGCGCCTTGTCC   1026
                      |||    ||||   |..||||||||||.|||||||||||.||..|.|||
BL00069___pbu    981 -TTTCGGCGCGG---CCCTGTTTTTCAGCCCGCTTGTCAGTGCGGTCTCC   1026

BSNT_04370___   1027 GGTATAGCCGCCATCACCTCGCCTGCTTTGATTATCGTCGGCAGCTTGAT   1076
                     ||.||.||.||.||.||.|||||.||.|||||.||.||.||.|||.||||
BL00069___pbu   1027 GGAATCGCAGCGATTACGTCGCCGGCATTGATCATTGTAGGAAGCATGAT   1076

BSNT_04370___   1077 GATGGGCTCGGTTTCCAATATGAACTGGAAAGAGATGGACGAGGCATTTC   1126
                     |||.|||.|.||..|.||.||...|||||||||..|.|||||.|||||||
BL00069___pbu   1077 GATCGGCGCCGTGACGAACATCCGCTGGAAAGAACTTGACGAAGCATTTC   1126

BSNT_04370___   1127 CAGCGTTTCTCGTCATTCTGGCCATGCCTTTGACATCCAGC-ATTTCTAC   1175
                     |.||.|||||||||||..||.|.|||||..|||||| ||.| |||.|.||
BL00069___pbu   1127 CGGCCTTTCTCGTCATCTTGACAATGCCGCTGACAT-CATCTATTGCGAC   1175

BSNT_04370___   1176 AGGAATTGCGCTTGGCTTTATTTCATATCCGATCGTAAAAGCGGCGCGGG   1225
                     |||.|||.|.||.||.|||||..|.||||||||.||.|||||.|||...|
BL00069___pbu   1176 AGGCATTTCCCTCGGGTTTATCGCTTATCCGATTGTGAAAGCCGCGAAAG   1225

BSNT_04370___   1226 GAAAATGGAGAGAGATTCATCCGCTCGTCATCGTTTTCGCCATTCTGTTT   1275
                     |.||||||.|.||||||||||||||.|||.||||.||.||..||||.|||
BL00069___pbu   1226 GCAAATGGCGCGAGATTCATCCGCTTGTCTTCGTGTTTGCTGTTCTCTTT   1275

BSNT_04370___   1276 TTCATCCAGCTGTTTATTTTATAA---------   1299
                     |||||.||.||.||..||||..||         
BL00069___pbu   1276 TTCATACACCTTTTCTTTTTGGAAGGGCATTAA   1308


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