Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04378 and BL00067
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_04378.1.5803.seq
# -bsequence dna-align/BL00067___ytfP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04378-BL00067___ytfP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04378-BL00067___ytfP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04378
# 2: BL00067___ytfP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1329
# Identity: 954/1329 (71.8%)
# Similarity: 954/1329 (71.8%)
# Gaps: 96/1329 ( 7.2%)
# Score: 3432.0
#
#
#=======================================
BSNT_04378 1 ATGAAAAGAAAGTTGATGATAAAGATGAAACAATATGACGTAATTGTAAT 50
|||||..|.|.|||.||.||.||.||
BL00067___ytf 1 ------------------------ATGAAGTATTTTGATGTCATCGTCAT 26
BSNT_04378 51 CGGCGGAGGCCCTTCAGGCTTGATGGCTGCGATTGCAGCAGGAGAACAGG 100
||||||||||||.|||||.||||||||.||.||.||.||.||.|||||||
BL00067___ytf 27 CGGCGGAGGCCCCTCAGGATTGATGGCCGCAATCGCGGCCGGTGAACAGG 76
BSNT_04378 101 GCGCTGGCGTGTTGCTGATAGATAAAGGAAATAAATTAGGACGGAAACTC 150
|.||.|.|||..|..|.||.||.||||||||.|||.|.|||||.||.||.
BL00067___ytf 77 GGGCGGACGTTCTCTTAATCGACAAAGGAAACAAACTCGGACGCAAGCTG 126
BSNT_04378 151 GCGATTTCCGGGGGCGGCCGCTGTAATGTGACGAACCGCCTTCCTGTGGA 200
||.|||||.||.|||||.||.||.|||||||||||||||.|.||.||.||
BL00067___ytf 127 GCCATTTCTGGAGGCGGACGGTGCAATGTGACGAACCGCTTGCCGGTTGA 176
BSNT_04378 201 AGAAATTATCAAGCACATCCCCGGCAACGGGCGTTTTTTATACAGCGCGT 250
.||.||.|||..|||.||.|||||.|||||.||.|||||.||||||||.|
BL00067___ytf 177 TGAGATCATCCGGCATATTCCCGGAAACGGACGCTTTTTGTACAGCGCTT 226
BSNT_04378 251 TTTCTGAATTTAATAATGAAGACATTATCAAGTTTTTTGAAAACCTCGGC 300
|||||||||||||.|||||.|||||.||||||||||||||....||.|||
BL00067___ytf 227 TTTCTGAATTTAACAATGAGGACATCATCAAGTTTTTTGAGCGTCTGGGC 276
BSNT_04378 301 ATTCAA-TTGAAGGAAGAGGATCACGGCCGGATGTTTCCTGTGACCGACA 349
.|||| .||||.||.||.||||||||..|.|||||||||||..||||||
BL00067___ytf 277 -GTCAAGCTGAAAGAGGAAGATCACGGAAGAATGTTTCCTGTCTCCGACA 325
BSNT_04378 350 AAGCCCAAAGTGTCGTTGACGCGCTGTTAAACAGGCT-GAAGCAGCTCCG 398
|.||.|||||.||.||.||.||.||.||||..||||| ||| |||||.|.
BL00067___ytf 326 AGGCGCAAAGCGTAGTGGATGCACTTTTAACAAGGCTCGAA-CAGCTTCA 374
BSNT_04378 399 CGTAACAATCAGAACGAACGAGAAAATTAAATCTGTTATAT---ATGAAG 445
.||||...|..|.||.|||||.|||.|.|||.||||..||| ||||||
BL00067___ytf 375 TGTAAGCGTACGTACAAACGAAAAAGTGAAAACTGTCCTATACAATGAAG 424
BSNT_04378 446 ATGGACAGGC-AGCAGGGATTGTGACGAATAATGGC---------GAAAT 485
| |.|.|| .|| |||||.|||||| ||| |||||
BL00067___ytf 425 A---AAAAGCGTGC-GGGATCGTGACG------GGCAGCGGTGAAGAAAT 464
BSNT_04378 486 GATCCATAGCCAGG---CAGTCATTATCGCTGTCGGCGGTAAAAGCGTGC 532
|.| ||| || |.|||.||||.|||||||||||.||||||||.|
BL00067___ytf 465 --TGC--AGC--GGGATCTGTCGTTATTGCTGTCGGCGGGAAAAGCGTCC 508
BSNT_04378 533 CTCATACCGGAAGCACGGGAGACGGCTATGAATGGGCTGAAGCCGCGGGA 582
|.|||||.|||...||.||||||||||||||||||||.|||...||.||.
BL00067___ytf 509 CCCATACGGGATCGACCGGAGACGGCTATGAATGGGCGGAAAAAGCCGGC 558
BSNT_04378 583 CATACCATAACAGAGCTGTTTCCGACAGAGGTTCCCGTCACTTCTAGCGA 632
|||||.||.||.||.||||||||.|||||||||||.||.||.|||..|||
BL00067___ytf 559 CATACGATTACGGAACTGTTTCCTACAGAGGTTCCGGTTACGTCTGACGA 608
BSNT_04378 633 ACCGTTCATTAAGCAAAAAACACTTCAGGGCTTATCACTAAGAGATGTAG 682
.||.||.||.||.||.||||||.|.||||||.|||||||.|||.|.||.|
BL00067___ytf 609 GCCATTTATCAATCAGAAAACATTGCAGGGCCTATCACTGAGAAACGTCG 658
BSNT_04378 683 CCGTCAGTGTGTTAAATAAAAAAGGCAAACCGATTATCACACATAAAATG 732
||.||||.||.||.||.||||||||.||.|||.|.|||||.||..|||||
BL00067___ytf 659 CCCTCAGCGTATTGAACAAAAAAGGAAAGCCGGTCATCACCCACCAAATG 708
BSNT_04378 733 GACATGCTGTTTACCCATTTCGGCCTCTCAGGACCTGCCATTCTCAGATG 782
||.|||.|.|||||||||||.||.||.||.|||||.||..|.||||||||
BL00067___ytf 709 GATATGATTTTTACCCATTTTGGACTGTCCGGACCCGCAGTCCTCAGATG 758
BSNT_04378 783 CAGCCAATTTGTCGTAAAAGAGCTGAAAAAACAGCCTCAAGTACCGATCA 832
|||||||||||||||.||||||.|||||||.|||....||||...|.|.|
BL00067___ytf 759 CAGCCAATTTGTCGTCAAAGAGTTGAAAAAGCAGGAAAAAGTCAGGCTGA 808
BSNT_04378 833 GAATCGACTTGTATCCGGATATCAATGAAGAAACGCTTTTCCAAAAGATG 882
.|||||||||||..||.|||||..||||.|||..||||||.|||...|||
BL00067___ytf 809 AAATCGACTTGTTCCCTGATATTCATGAGGAACAGCTTTTTCAACGCATG 858
BSNT_04378 883 TATAAAGAACTGAAGGAAGCACCGAAAAAAACCATTAAAAACGTGCTGAA 932
.||||||||.|||||||.||.|||||.|||.|..|.||||||||||||||
BL00067___ytf 859 CATAAAGAATTGAAGGACGCTCCGAAGAAATCACTCAAAAACGTGCTGAA 908
BSNT_04378 933 GCCTTGGATGCAGGAGCGCTATCTCCTATTCCTGCTCG-----AAAAAAA 977
|||||||||||||||..|.|||||.||.||.||..||| ||.||.|
BL00067___ytf 909 GCCTTGGATGCAGGAAAGGTATCTGCTGTTTCTTTTCGAGCGCAACAAGA 958
BSNT_04378 978 CGGCATCTCTCCGAACGTATCGTTTTCTGAGCTGCCGAAGGATCCTTTCA 1027
..| |||..||.|| |.|.||.|||...||..|.||.||.|.|||||
BL00067___ytf 959 TTG-ATCCTTCTGA----AACCTTCTCTTCCCTTTCCAAAGACCGTTTCA 1003
BSNT_04378 1028 GACAATTTGTAAGGGACTGCAAGCAGTTTACTGTCCTCGCAAATGGCACA 1077
||...||.||.|..|||||.||..|||||||||||..||..||.|||||.
BL00067___ytf 1004 GAGCTTTCGTCAAAGACTGTAAAGAGTTTACTGTCAACGTGAACGGCACC 1053
BSNT_04378 1078 CTGTCGCTTGATAAGGCATTTGTCACGGGAGGCGGGGTATCTGTAAAAGA 1127
||.||||||||.||.||.|||||.||.||.||.|||||.||.||||||||
BL00067___ytf 1054 CTTTCGCTTGACAAAGCCTTTGTGACCGGCGGAGGGGTTTCCGTAAAAGA 1103
BSNT_04378 1128 AATTGACCCGAAAAAAATGGCTTCTAAAAAAATGGAGGGGCTTTATTTTT 1177
|||.||.||.|||||||||||.||.|||||||.|||.|||||||||||.|
BL00067___ytf 1104 AATCGATCCTAAAAAAATGGCGTCCAAAAAAAAGGAAGGGCTTTATTTCT 1153
BSNT_04378 1178 GCGGTGAAATCCTGGATATCCACGGCTACACAGGCGGATACAATATTACC 1227
||||.||||||||.|||||.||||||||.||.||.||.||.|||||.||.
BL00067___ytf 1154 GCGGGGAAATCCTCGATATTCACGGCTATACGGGTGGGTATAATATCACA 1203
BSNT_04378 1228 TCCGCCCTTGTCACAGGCAGGCTTGCAGGGCTAAATGCCGGACAATACGC 1277
|||||.||||||||||||||.||||||||..|.|||||.||..|||
BL00067___ytf 1204 TCCGCGCTTGTCACAGGCAGACTTGCAGGCTTGAATGCAGGCGAAT---- 1249
BSNT_04378 1278 CCGTT---CTT--------AA-------- 1287
|| ||| ||
BL00067___ytf 1250 ---TTTCGCTTTGCCGGAGAAAAAAATAA 1275
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