Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04441 and BL00061
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04441___ytqB.1.5803.seq
# -bsequence dna-align/BL00061___ytqB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04441___ytqB-BL00061___ytqB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04441___ytqB-BL00061___ytqB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04441___ytqB
# 2: BL00061___ytqB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 612
# Identity: 431/612 (70.4%)
# Similarity: 431/612 (70.4%)
# Gaps: 54/612 ( 8.8%)
# Score: 1439.5
#
#
#=======================================
BSNT_04441___ 1 ATGATTTTGAAGAAAATTCTTCCTTACAGC-AAAGAACTGCTGAAAATGG 49
||||...|.||||||||.||.||.|| .|| ||||||||||||||||..|
BL00061___ytq 1 ATGAAGCTCAAGAAAATCCTCCCGTA-TGCGAAAGAACTGCTGAAAACAG 49
BSNT_04441___ 50 CCGCGGGAGAGGGAGATATTGTCGTAGATGCGACAATGGGCAACGGACAT 99
||||.||.||.|||||.||.|||.|.||||||||||||||.|||||||||
BL00061___ytq 50 CCGCAGGCGAAGGAGACATCGTCATTGATGCGACAATGGGAAACGGACAT 99
BSNT_04441___ 100 GATACACAGTTTTTAGCGGAGCTTGTCGGTGAAAACGGCCATGTATACGC 149
|||||.||.||||||||.||.|||||||||||||.|||.|||||.||.||
BL00061___ytq 100 GATACTCACTTTTTAGCTGAACTTGTCGGTGAAAGCGGGCATGTCTATGC 149
BSNT_04441___ 150 ATTCGACATCCAAGAATCAGCCGTGGCCAATACAAAGGAACGGCTCGGTG 199
.||.|||||.||||||.||||..|....|||||....|||.|.||.||..
BL00061___ytq 150 CTTTGACATTCAAGAAGCAGCTCTTATGAATACTGCCGAAAGACTTGGAA 199
BSNT_04441___ 200 ACATGTATCAAGCGCGAACAACGTTATTTCACAAAAGCCATGATAAAATC 249
||..||||.|||..||....||.||..||||.||||||||||||.|
BL00061___ytq 200 ACGAGTATAAAGACCGGGTGACATTGATTCAAAAAAGCCATGATGA---- 245
BSNT_04441___ 250 GCTGAATCCCTC-CCGCCTGAAAC-ACAT----GGCAAAGTGGCGGCCGC 293
|||.|...|.|| |..|||| || |||| |||||.|||||.||.||
BL00061___ytq 246 GCTCACCACTTCGCTTCCTG--ACGACATCTCAGGCAAGGTGGCAGCAGC 293
BSNT_04441___ 294 GGTATTTAACCTCGGCTATTTGCCGGGCGGGGACAAATCAATTACGACAA 343
.||.|||||||||||.|||.|.|||||.||.||||||||..|.|||||||
BL00061___ytq 294 CGTGTTTAACCTCGGATATCTTCCGGGAGGCGACAAATCGGTGACGACAA 343
BSNT_04441___ 344 ACGGCAGTTCTACGATCAAAGC---CATTGAACAGCTTCTCAGCATCATG 390
|..||..|||.||.||| || |||..|.||||||||||..|||.||
BL00061___ytq 344 AAAGCGATTCGACCATC---GCCAGCATCAAGCAGCTTCTCAAAATCCTG 390
BSNT_04441___ 391 AAAGACGAAGGTCTGATTGTTCTCGTCGTCTATCATGGCCACCCGGAAGG 440
|||.|.||.||.|||||.||.||.||||||||.||||||||.||.|||||
BL00061___ytq 391 AAAAATGAGGGGCTGATCGTGCTTGTCGTCTACCATGGCCATCCCGAAGG 440
BSNT_04441___ 441 CAAAGC-TGAAAAAAACGACGTGCTCGAGTTTTGCCGGGACTTG------ 483
||||| .||||||.|||.|.|||||||.||||| ||
BL00061___ytq 441 -AAAGCGGGAAAAAGACGCCCTGCTCGAATTTTG--------TGCATCGC 481
BSNT_04441___ 484 --GACCAGCAATCAGCCCGTG-----TATTAAC-ATACGGATTTATCAAT 525
||||||.|..|.||||||| |.|||.| || ||||| ||.
BL00061___ytq 482 TCGACCAGGATACGGCCCGTGTCCTCTGTTACCAAT----ATTTA--AAC 525
BSNT_04441___ 526 CAGCAAAATGACCCGCCATTTATTGTCGCCATCGAAAAAAAAGCTCAGAT 575
||||.|||.||.|||||.|||||..|.||.||||||||.||||....|.|
BL00061___ytq 526 CAGCGAAACGATCCGCCGTTTATCATTGCGATCGAAAAGAAAGAAGCGGT 575
BSNT_04441___ 576 CAGCAAA--TGA 585
| |||| |||
BL00061___ytq 576 C--CAAAAGTGA 585
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