Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00417 and BL00060

See Amino acid alignment / Visit BSNT_00417 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence dna-align/BSNT_00417___gltP.1.5803.seq
#    -bsequence dna-align/BL00060___gltP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00417___gltP-BL00060___gltP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00417___gltP-BL00060___gltP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00417___gltP
# 2: BL00060___gltP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1255
# Identity:     991/1255 (79.0%)
# Similarity:   991/1255 (79.0%)
# Gaps:          14/1255 ( 1.1%)
# Score: 3862.5
# 
#
#=======================================

BSNT_00417___      1 TTGAAAAAATTAATCGCGTTTCAAATTTTAATCGCTTTGGCTGTCGGCGC     50
                     |||||||||||.|||||.|.|||||||||.|||||..|.||..|.||.||
BL00060___glt      1 TTGAAAAAATTTATCGCTTATCAAATTTTGATCGCACTCGCCATTGGAGC     50

BSNT_00417___     51 GGTGATCGGCCACTTTTTTCCTGATTTCGGGATGGCACTGAGGCCTGTCG    100
                     .||.|||||.||.||.||.|||||||||||.|||||.|||.|.||.||||
BL00060___glt     51 AGTTATCGGACATTTCTTCCCTGATTTCGGAATGGCGCTGCGCCCCGTCG    100

BSNT_00417___    101 GAGATGGATTTATCCGCCTGATTAAAATGATTGTTGTGCCGATTGTATTT    150
                     ||||.|||||||||||.||||||||||||||.||.||.||.||.||.|||
BL00060___glt    101 GAGACGGATTTATCCGTCTGATTAAAATGATCGTCGTTCCAATCGTTTTT    150

BSNT_00417___    151 TCTACCATTGTCATTGGAGCCGCAGGAAGCGGAAGCATGAAAAAAATGGG    200
                     |||||.||||||||.|||||.||.||||||||||||||||||||||||||
BL00060___glt    151 TCTACAATTGTCATCGGAGCGGCCGGAAGCGGAAGCATGAAAAAAATGGG    200

BSNT_00417___    201 CAGCCTCGGCATCAAGACGATCATTTGGTTCGAAGTGATTACAACGTTGG    250
                     |||||||||||||||||||||.||||||||.|||||||||||.|||||.|
BL00060___glt    201 CAGCCTCGGCATCAAGACGATTATTTGGTTTGAAGTGATTACGACGTTCG    250

BSNT_00417___    251 TATTAGGGCTTGGACTTTTATTAGCGAATGTCTTAAAACCAGGTGTCGGG    300
                     |..|.||.||.||.||..|.||.||.|||||.|||||.||.||.|||||.
BL00060___glt    251 TGCTCGGACTCGGGCTGCTTTTGGCTAATGTGTTAAAGCCCGGCGTCGGC    300

BSNT_00417___    301 CTTGACCTCTCCCATTTGGCAAAAAAAGATATTCATGAACTTTCCGGCTA    350
                     ||||||||.|||||||||||.|||||.|||||..|.|||||.||.|||||
BL00060___glt    301 CTTGACCTTTCCCATTTGGCCAAAAAGGATATCGACGAACTCTCGGGCTA    350

BSNT_00417___    351 CACAGACAAAGTTGTTGATTTCAAGCAAATGGTCCTGGATATTATCCCTA    400
                     |||.||.|||||.||.|||.|.||.||||||.||||.|||||.||.||||
BL00060___glt    351 CACGGAAAAAGTGGTCGATATTAAACAAATGATCCTCGATATCATTCCTA    400

BSNT_00417___    401 CAAACATTATTGATGTCATGGCCAGAAATGATTTGCTTGCCGTTATTTTC    450
                     |.|||||..||||.|||||||||||||||||||||||.|||||.||.|||
BL00060___glt    401 CCAACATCGTTGACGTCATGGCCAGAAATGATTTGCTCGCCGTGATCTTC    450

BSNT_00417___    451 TTCGCCATTTTATTTGGTGTCGCCGCAGCTGGTATCGGCAAAGCTTCTGA    500
                     ||.||.||.||.||.||.||.||.||.||.||.|||||||||||.||.||
BL00060___glt    451 TTTGCGATATTGTTCGGCGTTGCAGCTGCCGGGATCGGCAAAGCCTCGGA    500

BSNT_00417___    501 ACCAGTAATGAAGTTTTTTGAATCTACCGCTCAGATTATGTTCAAGCTCA    550
                     |||.||.||||||||||||||||||...||..|.||.|||||||||||.|
BL00060___glt    501 ACCTGTCATGAAGTTTTTTGAATCTGTTGCCAACATCATGTTCAAGCTGA    550

BSNT_00417___    551 CGCAAATCGTCATGGTCACTGCTCCTATCGGCGTGTTAGCCCTGATGGCA    600
                     ||||.||.||.||||||||.||.||||||||||||.|.||.||.|||||.
BL00060___glt    551 CGCAGATGGTGATGGTCACAGCGCCTATCGGCGTGCTTGCTCTTATGGCC    600

BSNT_00417___    601 GCTTCTGTGGGCCAATATGGCATTGAACTCCTCCTCCCTATGTTTAAGCT    650
                     ||.||.||.||.|||||.|||||.||.|||||.||.||||||||.||..|
BL00060___glt    601 GCATCCGTCGGGCAATACGGCATCGAGCTCCTGCTTCCTATGTTAAAATT    650

BSNT_00417___    651 GGTTGGCACCGTATTCCTTGGCCTGTTCCTGATCCTCTTTGTCCTCTTTC    700
                     .||.|||||.||.||.||.||.|||||.||..|.||.|||||..|.||||
BL00060___glt    651 AGTCGGCACTGTTTTTCTCGGACTGTTTCTCGTTCTTTTTGTTTTATTTC    700

BSNT_00417___    701 CGCTTGTCGGTCTCATCTTTCAGATTAAGTATTTCGAAGTATTGAAAATG    750
                     ||.|.||||||||..|.|||.|.|||||.||.||||||||..||||||||
BL00060___glt    701 CGATCGTCGGTCTTGTTTTTAAAATTAAATACTTCGAAGTCCTGAAAATG    750

BSNT_00417___    751 ATATGGGATCTGTTTTTAATTGCATTTTCCACCACCAGCACTGAAACCAT    800
                     ||.||||||.|||||.|.||.||.||.|||||.||.|||||.|||| ||.
BL00060___glt    751 ATTTGGGATTTGTTTCTGATCGCGTTCTCCACGACGAGCACAGAAA-CAG    799

BSNT_00417___    801 TC-TCCCTCAGCTGATGGATAGAATGGAGAAATACGGCTGTCCCAAACGA    849
                     || |.||.|||||||||||..|.|||||||||||||||||.||.|||||.
BL00060___glt    800 TCTTGCCGCAGCTGATGGACCGCATGGAGAAATACGGCTGCCCAAAACGG    849

BSNT_00417___    850 GTGGTATCATTTGTCGTTCCCTCCGGCTTGTCATTGAACTGTGACGGCTC    899
                     ||.||.||.||.||.|||||.||.|||||.||..||||.||.||||||||
BL00060___glt    850 GTCGTTTCCTTCGTGGTTCCTTCAGGCTTATCTCTGAATTGCGACGGCTC    899

BSNT_00417___    900 CAGCTTATATTTATCGGTTTCTTGTATCTTTCTCGCACAGGCCTTTCAA-    948
                     ||||.|||||||||||||..|.|||||||||.|.||.|||| ||||||| 
BL00060___glt    900 CAGCCTATATTTATCGGTCGCCTGTATCTTTTTGGCGCAGG-CTTTCAAT    948

BSNT_00417___    949 GTAGACATGA-CATTGTCCCAGCAGCTGCTCATGATGCTTGTGCTTGTGA    997
                     .||||||||| |||| ||||||||..|||||||||||||.|||||.||||
BL00060___glt    949 ATAGACATGAGCATT-TCCCAGCAATTGCTCATGATGCTCGTGCTAGTGA    997

BSNT_00417___    998 TGACCAGTAAAGGCATTGCAGCTGTACCCTCAGGATCGCTTGTAGTTCTT   1047
                     ||||.||.|||||.||.||.||.||.||.||.||.|||||.||.||.|||
BL00060___glt    998 TGACAAGCAAAGGGATCGCCGCCGTGCCATCTGGCTCGCTCGTCGTCCTT   1047

BSNT_00417___   1048 CTGGCGACTGCCAATGCTGTAGGACTGCCGGCTGAAGGCGTTGCCATTAT   1097
                     |||||.||.|||||.||.||.||.||.||.||||||||.||.||.|||||
BL00060___glt   1048 CTGGCTACCGCCAACGCAGTCGGCCTTCCCGCTGAAGGAGTCGCGATTAT   1097

BSNT_00417___   1098 AGCGGGTGTTGACCGCGTCATGGACATGGCGAGAACGGGCGTGAACGTAC   1147
                     .|||||.||.||||||||.||||||||||||.||||.|||||||||||.|
BL00060___glt   1098 CGCGGGAGTGGACCGCGTGATGGACATGGCGCGAACAGGCGTGAACGTGC   1147

BSNT_00417___   1148 CGGGACATGCGATCGCCTGTATCGTGGTATCAAAATGGGAAAAGGCCTTC   1197
                     ||||.|||||..|||||||.|||||.||.||.|||||||||||...||||
BL00060___glt   1148 CGGGTCATGCTGTCGCCTGCATCGTTGTTTCTAAATGGGAAAAAAGCTTC   1197

BSNT_00417___   1198 CGCCAAAAAGAATGGGTTTCCGC-----AAACA--GCCAAACTGAAAGCA   1240
                     || ..|.||.||..|.|||..||     |||||  .||..||.||||||.
BL00060___glt   1198 CG-GTATAATAAGCGCTTTGTGCTTGAAAAACAATACCGGACGGAAAGCT   1246

BSNT_00417___   1241 TATAG   1245
                     ||||.
BL00060___glt   1247 TATAA   1251


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