Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00417 and BL00060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_00417___gltP.1.5803.seq
# -bsequence dna-align/BL00060___gltP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00417___gltP-BL00060___gltP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00417___gltP-BL00060___gltP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00417___gltP
# 2: BL00060___gltP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1255
# Identity: 991/1255 (79.0%)
# Similarity: 991/1255 (79.0%)
# Gaps: 14/1255 ( 1.1%)
# Score: 3862.5
#
#
#=======================================
BSNT_00417___ 1 TTGAAAAAATTAATCGCGTTTCAAATTTTAATCGCTTTGGCTGTCGGCGC 50
|||||||||||.|||||.|.|||||||||.|||||..|.||..|.||.||
BL00060___glt 1 TTGAAAAAATTTATCGCTTATCAAATTTTGATCGCACTCGCCATTGGAGC 50
BSNT_00417___ 51 GGTGATCGGCCACTTTTTTCCTGATTTCGGGATGGCACTGAGGCCTGTCG 100
.||.|||||.||.||.||.|||||||||||.|||||.|||.|.||.||||
BL00060___glt 51 AGTTATCGGACATTTCTTCCCTGATTTCGGAATGGCGCTGCGCCCCGTCG 100
BSNT_00417___ 101 GAGATGGATTTATCCGCCTGATTAAAATGATTGTTGTGCCGATTGTATTT 150
||||.|||||||||||.||||||||||||||.||.||.||.||.||.|||
BL00060___glt 101 GAGACGGATTTATCCGTCTGATTAAAATGATCGTCGTTCCAATCGTTTTT 150
BSNT_00417___ 151 TCTACCATTGTCATTGGAGCCGCAGGAAGCGGAAGCATGAAAAAAATGGG 200
|||||.||||||||.|||||.||.||||||||||||||||||||||||||
BL00060___glt 151 TCTACAATTGTCATCGGAGCGGCCGGAAGCGGAAGCATGAAAAAAATGGG 200
BSNT_00417___ 201 CAGCCTCGGCATCAAGACGATCATTTGGTTCGAAGTGATTACAACGTTGG 250
|||||||||||||||||||||.||||||||.|||||||||||.|||||.|
BL00060___glt 201 CAGCCTCGGCATCAAGACGATTATTTGGTTTGAAGTGATTACGACGTTCG 250
BSNT_00417___ 251 TATTAGGGCTTGGACTTTTATTAGCGAATGTCTTAAAACCAGGTGTCGGG 300
|..|.||.||.||.||..|.||.||.|||||.|||||.||.||.|||||.
BL00060___glt 251 TGCTCGGACTCGGGCTGCTTTTGGCTAATGTGTTAAAGCCCGGCGTCGGC 300
BSNT_00417___ 301 CTTGACCTCTCCCATTTGGCAAAAAAAGATATTCATGAACTTTCCGGCTA 350
||||||||.|||||||||||.|||||.|||||..|.|||||.||.|||||
BL00060___glt 301 CTTGACCTTTCCCATTTGGCCAAAAAGGATATCGACGAACTCTCGGGCTA 350
BSNT_00417___ 351 CACAGACAAAGTTGTTGATTTCAAGCAAATGGTCCTGGATATTATCCCTA 400
|||.||.|||||.||.|||.|.||.||||||.||||.|||||.||.||||
BL00060___glt 351 CACGGAAAAAGTGGTCGATATTAAACAAATGATCCTCGATATCATTCCTA 400
BSNT_00417___ 401 CAAACATTATTGATGTCATGGCCAGAAATGATTTGCTTGCCGTTATTTTC 450
|.|||||..||||.|||||||||||||||||||||||.|||||.||.|||
BL00060___glt 401 CCAACATCGTTGACGTCATGGCCAGAAATGATTTGCTCGCCGTGATCTTC 450
BSNT_00417___ 451 TTCGCCATTTTATTTGGTGTCGCCGCAGCTGGTATCGGCAAAGCTTCTGA 500
||.||.||.||.||.||.||.||.||.||.||.|||||||||||.||.||
BL00060___glt 451 TTTGCGATATTGTTCGGCGTTGCAGCTGCCGGGATCGGCAAAGCCTCGGA 500
BSNT_00417___ 501 ACCAGTAATGAAGTTTTTTGAATCTACCGCTCAGATTATGTTCAAGCTCA 550
|||.||.||||||||||||||||||...||..|.||.|||||||||||.|
BL00060___glt 501 ACCTGTCATGAAGTTTTTTGAATCTGTTGCCAACATCATGTTCAAGCTGA 550
BSNT_00417___ 551 CGCAAATCGTCATGGTCACTGCTCCTATCGGCGTGTTAGCCCTGATGGCA 600
||||.||.||.||||||||.||.||||||||||||.|.||.||.|||||.
BL00060___glt 551 CGCAGATGGTGATGGTCACAGCGCCTATCGGCGTGCTTGCTCTTATGGCC 600
BSNT_00417___ 601 GCTTCTGTGGGCCAATATGGCATTGAACTCCTCCTCCCTATGTTTAAGCT 650
||.||.||.||.|||||.|||||.||.|||||.||.||||||||.||..|
BL00060___glt 601 GCATCCGTCGGGCAATACGGCATCGAGCTCCTGCTTCCTATGTTAAAATT 650
BSNT_00417___ 651 GGTTGGCACCGTATTCCTTGGCCTGTTCCTGATCCTCTTTGTCCTCTTTC 700
.||.|||||.||.||.||.||.|||||.||..|.||.|||||..|.||||
BL00060___glt 651 AGTCGGCACTGTTTTTCTCGGACTGTTTCTCGTTCTTTTTGTTTTATTTC 700
BSNT_00417___ 701 CGCTTGTCGGTCTCATCTTTCAGATTAAGTATTTCGAAGTATTGAAAATG 750
||.|.||||||||..|.|||.|.|||||.||.||||||||..||||||||
BL00060___glt 701 CGATCGTCGGTCTTGTTTTTAAAATTAAATACTTCGAAGTCCTGAAAATG 750
BSNT_00417___ 751 ATATGGGATCTGTTTTTAATTGCATTTTCCACCACCAGCACTGAAACCAT 800
||.||||||.|||||.|.||.||.||.|||||.||.|||||.|||| ||.
BL00060___glt 751 ATTTGGGATTTGTTTCTGATCGCGTTCTCCACGACGAGCACAGAAA-CAG 799
BSNT_00417___ 801 TC-TCCCTCAGCTGATGGATAGAATGGAGAAATACGGCTGTCCCAAACGA 849
|| |.||.|||||||||||..|.|||||||||||||||||.||.|||||.
BL00060___glt 800 TCTTGCCGCAGCTGATGGACCGCATGGAGAAATACGGCTGCCCAAAACGG 849
BSNT_00417___ 850 GTGGTATCATTTGTCGTTCCCTCCGGCTTGTCATTGAACTGTGACGGCTC 899
||.||.||.||.||.|||||.||.|||||.||..||||.||.||||||||
BL00060___glt 850 GTCGTTTCCTTCGTGGTTCCTTCAGGCTTATCTCTGAATTGCGACGGCTC 899
BSNT_00417___ 900 CAGCTTATATTTATCGGTTTCTTGTATCTTTCTCGCACAGGCCTTTCAA- 948
||||.|||||||||||||..|.|||||||||.|.||.|||| |||||||
BL00060___glt 900 CAGCCTATATTTATCGGTCGCCTGTATCTTTTTGGCGCAGG-CTTTCAAT 948
BSNT_00417___ 949 GTAGACATGA-CATTGTCCCAGCAGCTGCTCATGATGCTTGTGCTTGTGA 997
.||||||||| |||| ||||||||..|||||||||||||.|||||.||||
BL00060___glt 949 ATAGACATGAGCATT-TCCCAGCAATTGCTCATGATGCTCGTGCTAGTGA 997
BSNT_00417___ 998 TGACCAGTAAAGGCATTGCAGCTGTACCCTCAGGATCGCTTGTAGTTCTT 1047
||||.||.|||||.||.||.||.||.||.||.||.|||||.||.||.|||
BL00060___glt 998 TGACAAGCAAAGGGATCGCCGCCGTGCCATCTGGCTCGCTCGTCGTCCTT 1047
BSNT_00417___ 1048 CTGGCGACTGCCAATGCTGTAGGACTGCCGGCTGAAGGCGTTGCCATTAT 1097
|||||.||.|||||.||.||.||.||.||.||||||||.||.||.|||||
BL00060___glt 1048 CTGGCTACCGCCAACGCAGTCGGCCTTCCCGCTGAAGGAGTCGCGATTAT 1097
BSNT_00417___ 1098 AGCGGGTGTTGACCGCGTCATGGACATGGCGAGAACGGGCGTGAACGTAC 1147
.|||||.||.||||||||.||||||||||||.||||.|||||||||||.|
BL00060___glt 1098 CGCGGGAGTGGACCGCGTGATGGACATGGCGCGAACAGGCGTGAACGTGC 1147
BSNT_00417___ 1148 CGGGACATGCGATCGCCTGTATCGTGGTATCAAAATGGGAAAAGGCCTTC 1197
||||.|||||..|||||||.|||||.||.||.|||||||||||...||||
BL00060___glt 1148 CGGGTCATGCTGTCGCCTGCATCGTTGTTTCTAAATGGGAAAAAAGCTTC 1197
BSNT_00417___ 1198 CGCCAAAAAGAATGGGTTTCCGC-----AAACA--GCCAAACTGAAAGCA 1240
|| ..|.||.||..|.|||..|| ||||| .||..||.||||||.
BL00060___glt 1198 CG-GTATAATAAGCGCTTTGTGCTTGAAAAACAATACCGGACGGAAAGCT 1246
BSNT_00417___ 1241 TATAG 1245
||||.
BL00060___glt 1247 TATAA 1251
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