Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04445 and BL00059
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_04445___ytoA.1.5803.seq
# -bsequence dna-align/BL00059___ytoA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04445___ytoA-BL00059___ytoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04445___ytoA-BL00059___ytoA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04445___ytoA
# 2: BL00059___ytoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 535
# Identity: 375/535 (70.1%)
# Similarity: 375/535 (70.1%)
# Gaps: 35/535 ( 6.5%)
# Score: 1256.0
#
#
#=======================================
BSNT_04445___ 1 ATGATCTACCCTTATAA------GGAACACAAGCCAGATATCCACCCAAC 44
||||||||||||||||| |||| ||.|.|||.||...|||
BL00059___yto 1 ATGATCTACCCTTATAAAAAAACGGAA------CCCGTTATTCATGAAAC 44
BSNT_04445___ 45 AGCCTTTATAGCTGATAATGCAACAATTACCGGTGATGTCGTGATCGGAG 94
.||.|||||.||.||.||.||....||.|||||.|||||....|||||||
BL00059___yto 45 GGCGTTTATCGCCGACAACGCGGTCATCACCGGAGATGTAACAATCGGAG 94
BSNT_04445___ 95 AACAGTCCAGCATTTGGTTTTCTGTTGTCATAAGGGGAGATGTTGCGCCG 144
|.|..||.|||||.|||||.|||..|||.||..|.||.|||||.||.|||
BL00059___yto 95 AGCGATCAAGCATCTGGTTCTCTTCTGTTATCCGCGGCGATGTCGCCCCG 144
BSNT_04445___ 145 ACCAGAATCGGAAACAGAGTCAATATCCAAGA--TTTAAGCTGCCTCCAT 192
..||||||.|||||..|.||.||.||.||||| ||| .|||.||.||.
BL00059___yto 145 GTCAGAATTGGAAAAGGTGTGAACATTCAAGACCTTT--CCTGTCTGCAC 192
BSNT_04445___ 193 CAAAGCCC-GAACAAGACGCTGCTC---ATTGAAGATGACGCCACGATAG 238
|||||||| |||| .|.|| ||| ||||||||.|..|..|||.|||
BL00059___yto 193 CAAAGCCCTGAAC---GCCCT-CTCGTGATTGAAGACGGTGTGACGGTAG 238
BSNT_04445___ 239 GCCATCAGGTTACACTTCATAGCGCTGTTATCCGCAAGAACGCCTTAATC 288
||||||||||||||.|.||.|||.|.||.||.||.|||.|.|||.|.|||
BL00059___yto 239 GCCATCAGGTTACATTGCACAGCTCCGTGATTCGAAAGCATGCCCTTATC 288
BSNT_04445___ 289 GGGATGGGCTCAATCATTTTAGACGGAGCCGAAATTGGCGAAGGCGCTTT 338
||.|||||.||.||.|||.|.||||.|||.||.||.||.|||||||||||
BL00059___yto 289 GGAATGGGGTCGATTATTCTTGACGAAGCGGAGATCGGGGAAGGCGCTTT 338
BSNT_04445___ 339 TATTGGTGCCGGCAGTCTTGTCCCGCCCGGAAAAATCATTCCGCCTGACC 388
|||.||.||.|||||.|||||||||||.||.||||..||.|||.|.|..|
BL00059___yto 339 TATCGGGGCGGGCAGCCTTGTCCCGCCTGGCAAAAAGATCCCGTCCGGGC 388
BSNT_04445___ 389 ATCTCGCCTTTGGCCGCCCTGCAAAAGTCATCCGCCCTTTGACGGAAGAA 438
|.|||||.||.|||.|.||.||.|||||||||||.||.||.||.||..||
BL00059___yto 389 ACCTCGCATTCGGCAGGCCCGCCAAAGTCATCCGTCCGTTAACCGACAAA 438
BSNT_04445___ 439 GACCGAAAAGATATGCAAAGAATACGGTCAGAATATGTAGAAAAGGGCCA 488
||...|.|.||.|||.||||||||||...|||||||.|.|||||.||.||
BL00059___yto 439 GATAAACAGGAAATGGAAAGAATACGCAAAGAATATATTGAAAAAGGACA 488
BSNT_04445___ 489 ATATTATAAATTTCTT-CAACAAACATAA------ 516
|||.||.||| |.||| |||.||| ||
BL00059___yto 489 ATACTACAAA-TCCTTGCAAAAAA---AAGATTAG 519
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