Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04332 and BL00056
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_04332___aroA.1.5803.seq
# -bsequence dna-align/BL00056___aroA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04332___aroA-BL00056___aroA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04332___aroA-BL00056___aroA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04332___aroA
# 2: BL00056___aroA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1097
# Identity: 865/1097 (78.9%)
# Similarity: 865/1097 (78.9%)
# Gaps: 31/1097 ( 2.8%)
# Score: 3405.5
#
#
#=======================================
BSNT_04332___ 1 ATGAAAAAAATGAGCAACACAGAGTTAGAGCTTT--TAAGGCAGAAAGCA 48
|||||||||||.||..|.|| ||| |.||||||.|.||.
BL00056___aro 1 ---------ATGAGCAACACTGAACTTGA--TTTGCTGAGGCAGCAGGCG 39
BSNT_04332___ 49 GACGAATTAAACCTACAAATTTTAAAACTAATCAACGAACGCGGAAATGT 98
.|.|||||||||.|.|||||.|||||.||.||.|||||.||.||||...|
BL00056___aro 40 AATGAATTAAACTTGCAAATATTAAAGCTGATTAACGAGCGAGGAAGAAT 89
BSNT_04332___ 99 TGTAAAAGAGATCGGTAAAGCGAAGGAAGCACAGGGCGTCAACCGATTTG 148
.||..|.|||||.||.|||||||||||||||||.|||.|||||||.|..|
BL00056___aro 90 CGTTCAGGAGATTGGAAAAGCGAAGGAAGCACAAGGCATCAACCGCTACG 139
BSNT_04332___ 149 ACCCTGTCAGAGAACGCACAATGTTAAACAATATCATTGAAAACAATGAC 198
|.||||||||||||.|..|.|||.|.|||.|.||.||||||||.||.|||
BL00056___aro 140 ATCCTGTCAGAGAAAGAGCGATGCTGAACGAAATTATTGAAAATAACGAC 189
BSNT_04332___ 199 GGGCCGTTCGAAAATTCAACCATCCAGCACATTTTTAAAGAGATATTCAA 248
||.|||||.|||||.||.||.||||||||.||.||.||||||||.|||||
BL00056___aro 190 GGACCGTTTGAAAACTCGACGATCCAGCATATCTTCAAAGAGATTTTCAA 239
BSNT_04332___ 249 AGCCGGTTTAGAGCTTCAGGAAGAAGATCACAGCAAAGCGCTGCTTGTCT 298
||||||..|.||.||.||||||||.||||||||||||||||||||.||.|
BL00056___aro 240 AGCCGGGCTTGAACTGCAGGAAGACGATCACAGCAAAGCGCTGCTCGTTT 289
BSNT_04332___ 299 CCCGCAAGAAAAAACCTGAAGATACAATTGTTGATATCAAAGGCGAAAAA 348
|||||||||||||.||||||.|||||||.||||||.|.||||||||||||
BL00056___aro 290 CCCGCAAGAAAAAGCCTGAAAATACAATCGTTGATCTGAAAGGCGAAAAA 339
BSNT_04332___ 349 ATCGGAGACGGCCAGCAAAGATTCATTGTCGGCCCATGTGCGGTAGAGAG 398
|||||.|||||..|.||||||||.||.|||||.||.||||||||.||.||
BL00056___aro 340 ATCGGCGACGGAGAACAAAGATTTATCGTCGGTCCGTGTGCGGTTGAAAG 389
BSNT_04332___ 399 CTATGAGCAGGTAGCTGAAGTCGCTGCAGCTGCGAAAAAACAAGGGATTA 448
|||.||.||.|||||.||||||||.||.||.||.|||||.|||||..|.|
BL00056___aro 390 CTACGAACAAGTAGCGGAAGTCGCAGCGGCAGCTAAAAAGCAAGGCTTGA 439
BSNT_04332___ 449 AAATTTTGCGCGGTGGAGCCTTTAAGCCTCGTACGAGCCCATACGATTTC 498
||.|..|.|||||.|||||.||.||.||.|||||.|||||.|||||.|||
BL00056___aro 440 AACTGCTTCGCGGCGGAGCTTTCAAACCGCGTACAAGCCCGTACGACTTC 489
BSNT_04332___ 499 CAAGGGCTTGGTGTTGAAGGCCTTCAAATTTTAAAACGTGTAGCGGATGA 548
|||||.||.||.||.||||||||.|||||.|||||.|||||.||.|||||
BL00056___aro 490 CAAGGCCTCGGCGTGGAAGGCCTGCAAATCTTAAAGCGTGTTGCTGATGA 539
BSNT_04332___ 549 ATTTGATCTGGCGGTTATCAGTGAAATCGTAACTCCGGCTCATATCGAAG 598
.|.|||||||||.||.||||||||.|||||.|.||||...|||||.||||
BL00056___aro 540 GTATGATCTGGCCGTCATCAGTGAGATCGTGAATCCGCAGCATATTGAAG 589
BSNT_04332___ 599 AAGCGCTGGACTACATTGATGTCATTCAAATCGGAGCGCGCAATATGCAA 648
||||..|.||.|||||.||||||||.||||||||.||.|||||.|||||.
BL00056___aro 590 AAGCCATTGATTACATCGATGTCATCCAAATCGGCGCCCGCAACATGCAG 639
BSNT_04332___ 649 AACTTCGAATTGCTGAAAGCGGCCGGCGCCGTGAAAAAGCCAGTGCTTCT 698
||||||||..|..|.|||||||||||..|.|||||.|||||.||.||.||
BL00056___aro 640 AACTTCGAGCTCTTAAAAGCGGCCGGTTCAGTGAAGAAGCCGGTTCTGCT 689
BSNT_04332___ 699 GAAGCGCGGTCTTGCTGCAACGATCTCT----GAATTCATCAATGCTGCT 744
|||||||||.|||||.|||||| || ||||||||||||||.||.
BL00056___aro 690 GAAGCGCGGACTTGCCGCAACG----CTGAAGGAATTCATCAATGCAGCG 735
BSNT_04332___ 745 GAATACATCATGTCACAAGGAAATGACCAAATTATCCTTTGTGAGCGCGG 794
||.|||||||||||.||.||.|||||.|||||.|||||||||||.|||||
BL00056___aro 736 GAGTACATCATGTCGCAGGGCAATGATCAAATCATCCTTTGTGAACGCGG 785
BSNT_04332___ 795 AATCAGAACATATGAAACAGCAACGAGAAACACGCTGGATATTTCAGCTG 844
|||||||||.|||||||||||.||.|||||.|||||.|||||.|||||||
BL00056___aro 786 AATCAGAACGTATGAAACAGCGACTAGAAATACGCTTGATATCTCAGCTG 835
BSNT_04332___ 845 TGCCGATTTTGAAACAAGAAACGCATTTGCCAGTCTTTGTTGATGTTACG 894
|||||||..||||.||.|||||.||..|.||.||.||.||.|||||.||.
BL00056___aro 836 TGCCGATCCTGAAGCAGGAAACTCACCTTCCTGTATTCGTGGATGTCACT 885
BSNT_04332___ 895 CATTCAACAGGCCGCCGTGACCT-CTTGCTTCCGACAGCTAAAGC--CGC 941
||||||||.||.|||||.||||| ||| |||||||||||.||||| |||
BL00056___aro 886 CATTCAACCGGACGCCGCGACCTGCTT-CTTCCGACAGCAAAAGCAGCGC 934
BSNT_04332___ 942 TTTAGCGATCGGTGCTGATGGCGTAATGGCTGAGGTTCACCCTGATCCGT 991
|| ||||||||.|||||.||.||.|||||.|||||.||.||||||||.|
BL00056___aro 935 TT--GCGATCGGAGCTGACGGTGTCATGGCCGAGGTCCATCCTGATCCTT 982
BSNT_04332___ 992 CAGTCGCACTTTCTGACTCTGCTCAGCAAATGGCGAT-TCCTGA-ATTCG 1039
|.|||||.|||||.|||||.|||||||||||| ||| |||.|| |||.|
BL00056___aro 983 CTGTCGCGCTTTCCGACTCAGCTCAGCAAATG--GATATCCCGACATTTG 1030
BSNT_04332___ 1040 AAAAATGGCTGAATGAACTGAAGCCAATGGTGAAAGTCAACGCTTAA 1086
||||||||.|.||||||||||||||..|.||..||||.||.||.|||
BL00056___aro 1031 AAAAATGGTTAAATGAACTGAAGCCGCTCGTTCAAGTAAAAGCATAA 1077
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