Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04332 and BL00056

See Amino acid alignment / Visit BSNT_04332 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:28
# Commandline: needle
#    -asequence dna-align/BSNT_04332___aroA.1.5803.seq
#    -bsequence dna-align/BL00056___aroA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04332___aroA-BL00056___aroA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04332___aroA-BL00056___aroA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04332___aroA
# 2: BL00056___aroA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1097
# Identity:     865/1097 (78.9%)
# Similarity:   865/1097 (78.9%)
# Gaps:          31/1097 ( 2.8%)
# Score: 3405.5
# 
#
#=======================================

BSNT_04332___      1 ATGAAAAAAATGAGCAACACAGAGTTAGAGCTTT--TAAGGCAGAAAGCA     48
                              |||||||||||.||..|.||  |||  |.||||||.|.||.
BL00056___aro      1 ---------ATGAGCAACACTGAACTTGA--TTTGCTGAGGCAGCAGGCG     39

BSNT_04332___     49 GACGAATTAAACCTACAAATTTTAAAACTAATCAACGAACGCGGAAATGT     98
                     .|.|||||||||.|.|||||.|||||.||.||.|||||.||.||||...|
BL00056___aro     40 AATGAATTAAACTTGCAAATATTAAAGCTGATTAACGAGCGAGGAAGAAT     89

BSNT_04332___     99 TGTAAAAGAGATCGGTAAAGCGAAGGAAGCACAGGGCGTCAACCGATTTG    148
                     .||..|.|||||.||.|||||||||||||||||.|||.|||||||.|..|
BL00056___aro     90 CGTTCAGGAGATTGGAAAAGCGAAGGAAGCACAAGGCATCAACCGCTACG    139

BSNT_04332___    149 ACCCTGTCAGAGAACGCACAATGTTAAACAATATCATTGAAAACAATGAC    198
                     |.||||||||||||.|..|.|||.|.|||.|.||.||||||||.||.|||
BL00056___aro    140 ATCCTGTCAGAGAAAGAGCGATGCTGAACGAAATTATTGAAAATAACGAC    189

BSNT_04332___    199 GGGCCGTTCGAAAATTCAACCATCCAGCACATTTTTAAAGAGATATTCAA    248
                     ||.|||||.|||||.||.||.||||||||.||.||.||||||||.|||||
BL00056___aro    190 GGACCGTTTGAAAACTCGACGATCCAGCATATCTTCAAAGAGATTTTCAA    239

BSNT_04332___    249 AGCCGGTTTAGAGCTTCAGGAAGAAGATCACAGCAAAGCGCTGCTTGTCT    298
                     ||||||..|.||.||.||||||||.||||||||||||||||||||.||.|
BL00056___aro    240 AGCCGGGCTTGAACTGCAGGAAGACGATCACAGCAAAGCGCTGCTCGTTT    289

BSNT_04332___    299 CCCGCAAGAAAAAACCTGAAGATACAATTGTTGATATCAAAGGCGAAAAA    348
                     |||||||||||||.||||||.|||||||.||||||.|.||||||||||||
BL00056___aro    290 CCCGCAAGAAAAAGCCTGAAAATACAATCGTTGATCTGAAAGGCGAAAAA    339

BSNT_04332___    349 ATCGGAGACGGCCAGCAAAGATTCATTGTCGGCCCATGTGCGGTAGAGAG    398
                     |||||.|||||..|.||||||||.||.|||||.||.||||||||.||.||
BL00056___aro    340 ATCGGCGACGGAGAACAAAGATTTATCGTCGGTCCGTGTGCGGTTGAAAG    389

BSNT_04332___    399 CTATGAGCAGGTAGCTGAAGTCGCTGCAGCTGCGAAAAAACAAGGGATTA    448
                     |||.||.||.|||||.||||||||.||.||.||.|||||.|||||..|.|
BL00056___aro    390 CTACGAACAAGTAGCGGAAGTCGCAGCGGCAGCTAAAAAGCAAGGCTTGA    439

BSNT_04332___    449 AAATTTTGCGCGGTGGAGCCTTTAAGCCTCGTACGAGCCCATACGATTTC    498
                     ||.|..|.|||||.|||||.||.||.||.|||||.|||||.|||||.|||
BL00056___aro    440 AACTGCTTCGCGGCGGAGCTTTCAAACCGCGTACAAGCCCGTACGACTTC    489

BSNT_04332___    499 CAAGGGCTTGGTGTTGAAGGCCTTCAAATTTTAAAACGTGTAGCGGATGA    548
                     |||||.||.||.||.||||||||.|||||.|||||.|||||.||.|||||
BL00056___aro    490 CAAGGCCTCGGCGTGGAAGGCCTGCAAATCTTAAAGCGTGTTGCTGATGA    539

BSNT_04332___    549 ATTTGATCTGGCGGTTATCAGTGAAATCGTAACTCCGGCTCATATCGAAG    598
                     .|.|||||||||.||.||||||||.|||||.|.||||...|||||.||||
BL00056___aro    540 GTATGATCTGGCCGTCATCAGTGAGATCGTGAATCCGCAGCATATTGAAG    589

BSNT_04332___    599 AAGCGCTGGACTACATTGATGTCATTCAAATCGGAGCGCGCAATATGCAA    648
                     ||||..|.||.|||||.||||||||.||||||||.||.|||||.|||||.
BL00056___aro    590 AAGCCATTGATTACATCGATGTCATCCAAATCGGCGCCCGCAACATGCAG    639

BSNT_04332___    649 AACTTCGAATTGCTGAAAGCGGCCGGCGCCGTGAAAAAGCCAGTGCTTCT    698
                     ||||||||..|..|.|||||||||||..|.|||||.|||||.||.||.||
BL00056___aro    640 AACTTCGAGCTCTTAAAAGCGGCCGGTTCAGTGAAGAAGCCGGTTCTGCT    689

BSNT_04332___    699 GAAGCGCGGTCTTGCTGCAACGATCTCT----GAATTCATCAATGCTGCT    744
                     |||||||||.|||||.||||||    ||    ||||||||||||||.||.
BL00056___aro    690 GAAGCGCGGACTTGCCGCAACG----CTGAAGGAATTCATCAATGCAGCG    735

BSNT_04332___    745 GAATACATCATGTCACAAGGAAATGACCAAATTATCCTTTGTGAGCGCGG    794
                     ||.|||||||||||.||.||.|||||.|||||.|||||||||||.|||||
BL00056___aro    736 GAGTACATCATGTCGCAGGGCAATGATCAAATCATCCTTTGTGAACGCGG    785

BSNT_04332___    795 AATCAGAACATATGAAACAGCAACGAGAAACACGCTGGATATTTCAGCTG    844
                     |||||||||.|||||||||||.||.|||||.|||||.|||||.|||||||
BL00056___aro    786 AATCAGAACGTATGAAACAGCGACTAGAAATACGCTTGATATCTCAGCTG    835

BSNT_04332___    845 TGCCGATTTTGAAACAAGAAACGCATTTGCCAGTCTTTGTTGATGTTACG    894
                     |||||||..||||.||.|||||.||..|.||.||.||.||.|||||.||.
BL00056___aro    836 TGCCGATCCTGAAGCAGGAAACTCACCTTCCTGTATTCGTGGATGTCACT    885

BSNT_04332___    895 CATTCAACAGGCCGCCGTGACCT-CTTGCTTCCGACAGCTAAAGC--CGC    941
                     ||||||||.||.|||||.||||| ||| |||||||||||.|||||  |||
BL00056___aro    886 CATTCAACCGGACGCCGCGACCTGCTT-CTTCCGACAGCAAAAGCAGCGC    934

BSNT_04332___    942 TTTAGCGATCGGTGCTGATGGCGTAATGGCTGAGGTTCACCCTGATCCGT    991
                     ||  ||||||||.|||||.||.||.|||||.|||||.||.||||||||.|
BL00056___aro    935 TT--GCGATCGGAGCTGACGGTGTCATGGCCGAGGTCCATCCTGATCCTT    982

BSNT_04332___    992 CAGTCGCACTTTCTGACTCTGCTCAGCAAATGGCGAT-TCCTGA-ATTCG   1039
                     |.|||||.|||||.|||||.||||||||||||  ||| |||.|| |||.|
BL00056___aro    983 CTGTCGCGCTTTCCGACTCAGCTCAGCAAATG--GATATCCCGACATTTG   1030

BSNT_04332___   1040 AAAAATGGCTGAATGAACTGAAGCCAATGGTGAAAGTCAACGCTTAA   1086
                     ||||||||.|.||||||||||||||..|.||..||||.||.||.|||
BL00056___aro   1031 AAAAATGGTTAAATGAACTGAAGCCGCTCGTTCAAGTAAAAGCATAA   1077


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