Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04333 and BL00054

See Amino acid alignment / Visit BSNT_04333 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence dna-align/BSNT_04333___ytxJ.1.5803.seq
#    -bsequence dna-align/BL00054___ytxJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04333___ytxJ-BL00054___ytxJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04333___ytxJ-BL00054___ytxJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04333___ytxJ
# 2: BL00054___ytxJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity:     238/343 (69.4%)
# Similarity:   238/343 (69.4%)
# Gaps:          32/343 ( 9.3%)
# Score: 777.5
# 
#
#=======================================

BSNT_04333___      1 ATGGCTAAACAGCTTATTCAATCTGAGGAAGAATTTAAACGGATTGCAGA     50
                     .||.|.||||||||.||||||.|.|||||.|||||||||.||.|||||||
BL00054___ytx      1 GTGTCGAAACAGCTCATTCAAACAGAGGATGAATTTAAAAGGCTTGCAGA     50

BSNT_04333___     51 ACAGGAAGGCGCTTTCGTCTTCTTTAAACACAGCACCACATGCCCGATCA    100
                     |.|..|.|...|.||..||||.||.|||||||||...|||||||||||||
BL00054___ytx     51 AAACAATGATACATTTATCTTTTTGAAACACAGCGTGACATGCCCGATCA    100

BSNT_04333___    101 GCCAGGC-AGCATTTCATGAGTTTGATGCCTTTGCAAATCAGCATGAGGA    149
                     | ||||| .||.|||.|.||.||.||..|.||.||.|||||||||||.||
BL00054___ytx    101 G-CAGGCGCGCGTTTGAAGAATTCGAATCATTCGCCAATCAGCATGAAGA    149

BSNT_04333___    150 TGTGCCGGCTTACTATCTTCAAGTACAAGAAGCCCGGCCGCTGTCTAATT    199
                     ..|.||||||||.|||.|..||||.||.|||..|||.||||||||.||.|
BL00054___ytx    150 CATACCGGCTTATTATTTAAAAGTGCAGGAAAGCCGCCCGCTGTCAAACT    199

BSNT_04333___    200 TCATTGCAGAAACATATGGGGTCAAGCATGAAAGCCCTCAGATATTCAT-    248
                     ..||.||.||...|||.|||.|.|||||.|||||.|||||....||||| 
BL00054___ytx    200 ATATCGCTGAGCAATACGGGATTAAGCACGAAAGTCCTCAAGCCTTCATT    249

BSNT_04333___    249 ----CATCCAGAACGGTGAA-GTGAAATGGCATACCTCACATTCACAAAT    293
                         ||     ||||| ||| ||||||||||||.||||.|||||.|||||
BL00054___ytx    250 TTTACA-----AACGG-GAATGTGAAATGGCATGCCTCCCATTCGCAAAT    293

BSNT_04333___    294 TA---CAGAAGCCGCTA-TTG-----AGCAGCATTTGTCATAG    327
                     ||   ||.||||    | |||     |.|||||     .|||.
BL00054___ytx    294 TACCGCACAAGC----ACTTGCGGAAAACAGCA-----GATAA    327


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