Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04340 and BL00050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence dna-align/BSNT_04340___murC.1.5803.seq
# -bsequence dna-align/BL00050___murC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04340___murC-BL00050___murC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04340___murC-BL00050___murC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04340___murC
# 2: BL00050___murC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1317
# Identity: 1013/1317 (76.9%)
# Similarity: 1013/1317 (76.9%)
# Gaps: 36/1317 ( 2.7%)
# Score: 3794.5
#
#
#=======================================
BSNT_04340___ 1 ATGACTGTTTATCATTTTGTTGGAATAAAAGGGACCGGTATGAGTCCGCT 50
||||||||||||||||||||.||||||||||||||.||||||||||||||
BL00050___mur 1 ATGACTGTTTATCATTTTGTCGGAATAAAAGGGACAGGTATGAGTCCGCT 50
BSNT_04340___ 51 TGCCCAAATACTTCATGATAATGGATATACTGTCCAAGGATCGGATATCG 100
|||||||||.||.||||||||||||||||.||||||||||||||||||||
BL00050___mur 51 TGCCCAAATTCTCCATGATAATGGATATAATGTCCAAGGATCGGATATCG 100
BSNT_04340___ 101 AAAAATTTATTTTTACGCAAACAGCGCTT--GAAAAAAGAAATATTACGA 148
||||.|..||||||||.||||| ||||| ||..|.||||||||..|||
BL00050___mur 101 AAAAGTACATTTTTACACAAAC--CGCTTTAGAGGAGAGAAATATCCCGA 148
BSNT_04340___ 149 TTCTTCC-TTTTAGCGCGGAAAATATTAAACCCGGCATGACAGTCATCGC 197
||..||| |||.|.| ||||||||||.||.||.||.|||||.||.||.||
BL00050___mur 149 TTTATCCGTTTGATC-CGGAAAATATCAAGCCGGGAATGACTGTTATTGC 197
BSNT_04340___ 198 CGGAAACGCATTCCCAGACACGCATCCTGAAATAGAAAAAGCG-ATGTCT 246
||||||.||.||.||.|||||.|||||.|||||.||||||||| |.| ||
BL00050___mur 198 CGGAAATGCTTTTCCCGACACTCATCCCGAAATTGAAAAAGCGCAAG-CT 246
BSNT_04340___ 247 GAGGGAATTCCGGTGATACGTTATCATAAGTTTTTAGGCGACTACATGAA 296
||.||..|.||.||..|.||.||||||||.|||.|.|||||.||..||||
BL00050___mur 247 GAAGGCCTGCCAGTCGTGCGGTATCATAAATTTCTCGGCGATTATCTGAA 296
BSNT_04340___ 297 AAAATTCACGAGTGTTGCCGTTACGGGCGCACACGGCAAAACGTCGACTA 346
.||.||.|||||..|||||||.||.||.|||||||||||||||||.||.|
BL00050___mur 297 GAAGTTTACGAGCATTGCCGTAACAGGGGCACACGGCAAAACGTCAACGA 346
BSNT_04340___ 347 CGGGTCTGCTGGCTCACGTGATCCAAAACGCAAAACCGACGTCTT-TCTT 395
||||.||..||.|.||.||.|||.||||.|||||||||||.|||| || |
BL00050___mur 347 CGGGCCTTTTGTCACATGTCATCAAAAAAGCAAAACCGACTTCTTATC-T 395
BSNT_04340___ 396 AATCGGAGACGGAACAGGCCAGGGAAATGAAAACAGCGAATACTTTGTGT 445
.||.|||||||||||.||..|.||....|||||||||||.|||||||||.
BL00050___mur 396 GATTGGAGACGGAACTGGAAAAGGCTGCGAAAACAGCGAGTACTTTGTGC 445
BSNT_04340___ 446 TTGAAGCGTGCGAATACCGCCGCCATTTCTTAAGCTATCAGCCAGATTAT 495
|||||||.||.||||||.|..|.|||||..|.|||||||||||.||||||
BL00050___mur 446 TTGAAGCCTGTGAATACAGAAGGCATTTTCTGAGCTATCAGCCCGATTAT 495
BSNT_04340___ 496 GCGATTATGACGAATATTGATTTTGATCATCCTGATTACTTCTCAAGCAT 545
||.||.|||||.||||||||||||||||||||.|||||.|||.|.|..||
BL00050___mur 496 GCAATCATGACAAATATTGATTTTGATCATCCCGATTATTTCGCGAATAT 545
BSNT_04340___ 546 TGACGATGTATTTGACGC-TTTCCAAGA-GATGGCTCTTCAGGTCAACAA 593
.||.|||||||||||.|| |||| ||| ||||||..|.|||||.|||||
BL00050___mur 546 CGATGATGTATTTGATGCATTTC--AGACGATGGCATTACAGGTGAACAA 593
BSNT_04340___ 594 AGGCATTATTGCCTGCGGAGACGATGAGCATCTGCCGAAAATCCATGCGA 643
.||.|||||.||.|||||.|||||.|||.||.||..||||||||||||||
BL00050___mur 594 GGGAATTATCGCATGCGGTGACGACGAGTATTTGATGAAAATCCATGCGA 643
BSNT_04340___ 644 ACGTCCCGGTTGTGTATTACGGCACGGGGGAAGAAAATGATTTTCAAGCC 693
||||.||.||.||.||.||||||...|..||.|||||.||||||||.||.
BL00050___mur 644 ACGTTCCAGTCGTATACTACGGCTTTGCCGAGGAAAACGATTTTCAGGCG 693
BSNT_04340___ 694 AGAAACATCGTAAAAAGCACGGAAGGGACAACTTTTGATGTCTTTGTCCG 743
|||||..||.|.||||..||.||.||.|||||.||.|||||.||.|||.|
BL00050___mur 694 AGAAATGTCATCAAAAATACTGAGGGCACAACGTTCGATGTTTTCGTCAG 743
BSNT_04340___ 744 CAATACGTTCTATGATACGTTTTATATTCCTGCGTACGGCCACCACAATG 793
.||.||.|||||.||.||.||.|||||.||.||.||||||..|||.||.|
BL00050___mur 744 GAACACATTCTACGACACTTTCTATATACCGGCATACGGCAGCCATAACG 793
BSNT_04340___ 794 TATTAAACTCATTGGCGGTCATTGCGTTATGCCATTATGAAGAAATTGAT 843
|..|.|||.|.|||||.|||||.||..|.||||||||||||.|..|.|||
BL00050___mur 794 TTCTGAACGCTTTGGCCGTCATCGCCCTCTGCCATTATGAACAGGTCGAT 843
BSNT_04340___ 844 -TCCAGCATCATT-AAGCATGCTCTCAAATCCTTTGGGGGCGTCAAACGC 891
||.| ||||||| |||.|.|.|..|||| |||||||.|||||.||||||
BL00050___mur 844 GTCGA-CATCATTAAAGAAGGATTGCAAA-CCTTTGGCGGCGTTAAACGC 891
BSNT_04340___ 892 AGATTCAATGAGAA--------GCAGCTTGGGGATCAAGTGCTGATCGAT 933
|||||.||.||.|| ||||| |||||||||||.||.
BL00050___mur 892 AGATTTAACGAAAAACATGCCGGCAGC--------CAAGTGCTGATTGAC 933
BSNT_04340___ 934 GACTATGCCCATCATCCGACAGAAATAAAAGTGACAATCGAGGCGGCAAG 983
||.||||||||.||||||||.|||||.|..|||||.||.||.||.||.||
BL00050___mur 934 GATTATGCCCACCATCCGACTGAAATCACGGTGACGATTGAAGCAGCCAG 983
BSNT_04340___ 984 ACAGAAGTATCCTGATCGGGAAATTGTCGCGGTATTCCAGCCTCATACAT 1033
||||||||||||.||.|||||.|||||.||.|||||.||.||.|||||||
BL00050___mur 984 ACAGAAGTATCCGGAACGGGACATTGTTGCAGTATTTCAACCGCATACAT 1033
BSNT_04340___ 1034 TTACACGGACGCAG-CAGTTCCTTGACGAATTTGCAGAAAGCCTGAGCGG 1082
||||.||.|||||| || |||||..|.||.|||||.||||||||.|....
BL00050___mur 1034 TTACGCGCACGCAGTCA-TTCCTGAATGAGTTTGCCGAAAGCCTCAAGAA 1082
BSNT_04340___ 1083 CGCTGACTGTGTGTATTTATGCGATATTTTCGGCTCAGCCCGTGAGAATG 1132
.||.||.|.|||.|||.|.||||||||.|||||.||.|||||.||.||.|
BL00050___mur 1083 AGCCGATTATGTATATCTTTGCGATATATTCGGATCTGCCCGGGAAAACG 1132
BSNT_04340___ 1133 CCGGAAAGCTGACGATCGGCGATCTCCAGGGAAAAATTCATAATGCCAAG 1182
|.|||||||||||||||||.|||.|.||||..|||||||...|.||.|||
BL00050___mur 1133 CAGGAAAGCTGACGATCGGTGATTTGCAGGAGAAAATTCCGCAGGCGAAG 1182
BSNT_04340___ 1183 CTGATTGAAGAAGATGACACATCTGTTTTAAAAGCTCATGATAAAGCCGT 1232
|||||.||.|||.||||||||||..|||||||.|..|||||.||.||.||
BL00050___mur 1183 CTGATCGATGAAAATGACACATCAATTTTAAAGGAGCATGAAAATGCGGT 1232
BSNT_04340___ 1233 TCTCATCTTCATGGGAGCAGGAGATATCCAAAAATATATGAGAGCCTACG 1282
..|.||.||||||||.|||||.||.||.|||||.|||.|.|||||.||.|
BL00050___mur 1233 GTTAATTTTCATGGGCGCAGGTGACATTCAAAAGTATTTAAGAGCATATG 1282
BSNT_04340___ 1283 AAAACGTCATGGCATAA 1299
||||.||..|.||||||
BL00050___mur 1283 AAAATGTATTAGCATAA 1299
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