Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04345 and BL00047
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:30
# Commandline: needle
# -asequence dna-align/BSNT_04345___ytpQ.1.5803.seq
# -bsequence dna-align/BL00047___ytpQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04345___ytpQ-BL00047___ytpQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04345___ytpQ-BL00047___ytpQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04345___ytpQ
# 2: BL00047___ytpQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 836
# Identity: 589/836 (70.5%)
# Similarity: 589/836 (70.5%)
# Gaps: 52/836 ( 6.2%)
# Score: 1998.5
#
#
#=======================================
BSNT_04345___ 1 TTGAAAATGACCTCAAGGAAGCTGTCAGATATACTGAAGCAGCGCCTTCA 50
.|||||||||||||||||||.||.||.||||||.|.||..|.||..|.||
BL00047___ytp 1 ATGAAAATGACCTCAAGGAAACTTTCCGATATATTAAAAAAACGTTTGCA 50
BSNT_04345___ 51 GCACGAGAATCGCTCCTTTCTGTTTGACAGAGAAAAAGACACCCTCCGTG 100
..|.||.|...|.|||||||..||.|||||.|||||.||||.|
BL00047___ytp 51 AAATGACAGCTGGTCCTTTCATTTCGACAGGGAAAAGGACAGC------- 93
BSNT_04345___ 101 TTGAGGATC--------AAACGACTAAAAAAGGGATTACACTCGATTTGC 142
|||||.||| |||| |||..||||||.|||||||||||..|.|
BL00047___ytp 94 TTGAGAATCGAAGATAAAAAC-ACTGGAAAAGGCATTACACTCGAGCTCC 142
BSNT_04345___ 143 CGCCGATTATTGCAAAATGGGAACTGAAAAAAGACGAAGCCATTGATGAG 192
||..|||.||.||.||||||||.|.|||||||||.||.||.|||||.||.
BL00047___ytp 143 CGGGGATCATCGCGAAATGGGAGCAGAAAAAAGATGATGCGATTGACGAA 192
BSNT_04345___ 193 ATCGTGTACTAT-----GTCTCCGAAGCGATGACGGCAATGGAAGGGAAG 237
.||||.||.||| | ||||||.|.|..||.|||.||||..||
BL00047___ytp 193 GTCGTCTATTATACTGAG-----GAAGCGCTCAACGCCATGAAAGGCCAG 237
BSNT_04345___ 238 GCTCAGGAAAT-----GACCGGGAAAGAAACTCGCATTTATCCGGTCATC 282
.|.|||||||| || |||||||| .|..||.|||||.||||||
BL00047___ytp 238 TCGCAGGAAATGGAAGGA-CGGGAAAG----CCTGATCTATCCCGTCATC 282
BSNT_04345___ 283 CGCTCGACTTCCTTCCCGGACAAGTCCAGCGAAGATATCCCGCTCATTTA 332
|||||.||||||||.||.||.||||||||||.||...|.||..|..|||.
BL00047___ytp 283 CGCTCAACTTCCTTTCCCGAGAAGTCCAGCGCAGGCGTTCCCTTGGTTTT 332
BSNT_04345___ 333 TGACGATCATACCGCAGAGACAAGAATTTATTACGCGCTAGATCTCGGGA 382
|||||..||.||.||.||.|||.|||||||.||.|||||.||.||.||.|
BL00047___ytp 333 TGACGGCCACACGGCTGAAACACGAATTTACTATGCGCTCGACCTTGGCA 382
BSNT_04345___ 383 AAACCTACCGTTTAATTGACCAGCGCATGCTTGAGAAAGAAAACTGGACA 432
|.||.||||||.|.||.|||.|....||||||||.|||||...|||||||
BL00047___ytp 383 ACACATACCGTCTGATCGACGAAAAAATGCTTGAAAAAGAGGGCTGGACA 432
BSNT_04345___ 433 AAAGAGCGGATCAGAGAGACGGCCGCATTTAATCTCCGTTCCCTGCCGAC 482
|||||..||||..|.||.||.||..|.|||||.||.||.||.||.|.|||
BL00047___ytp 433 AAAGAAAGGATTCGGGAAACAGCTTCCTTTAACCTTCGCTCGCTCCAGAC 482
BSNT_04345___ 483 GGTTGTCAAAGAGGATACG--GTTGCCGGCAATTACTTTTATTTCTTCAG 530
.|||||.||||| |.||| ||.||.||||||.||||.||.||.|||||
BL00047___ytp 483 CGTTGTAAAAGA--AGACGAAGTCGCAGGCAATCACTTCTACTTTTTCAG 530
BSNT_04345___ 531 GGCAAACGACGGATACGATGCAAGCCGGATTTTGAACGAAGCGA-TCTTA 579
.||.||.|||||.||.||.||.|||.||.|.|||||||||.||| |||..
BL00047___ytp 531 AGCGAATGACGGCTATGACGCCAGCAGGGTGTTGAACGAATCGATTCTCG 580
BSNT_04345___ 580 AATGAGTATAAGCAGCATGCAGAAGGGGAGCTGGCGATCTCTGTTCCTCA 629
.| ||||||.||.|..|.||.||||||...||.||..|.||..||||.||
BL00047___ytp 581 CA-GAGTATGAGAAAAACGCGGAAGGGACCCTCGCCGTGTCAATTCCGCA 629
BSNT_04345___ 630 TCAGGACGTTTTGATTCTTGCTGACATCCGGAATGAAT-CGGGGTATGAT 678
.|||||.||..|||||.||||.||||||||.||| ||| |.||.||.|||
BL00047___ytp 630 CCAGGATGTGCTGATTATTGCCGACATCCGCAAT-AATGCCGGATACGAT 678
BSNT_04345___ 679 ATTCTAGGACAAATGTCGATGAGCTTCTTTGCAGGCGGCACCGTCCCGAT 728
||.||.||.|||||||||||||||||.||||||..||||||.||.|||||
BL00047___ytp 679 ATACTCGGGCAAATGTCGATGAGCTTTTTTGCAAACGGCACAGTGCCGAT 728
BSNT_04345___ 729 TACCGCCCTTTCATTTTTGTACAATGAAGGAAAGCTGGAACCGGTGTTTA 778
.||.||.|||||.||..||||..|.||.||||||||.||||||.|.||||
BL00047___ytp 729 CACTGCGCTTTCTTTCCTGTATGAGGATGGAAAGCTTGAACCGATCTTTA 778
BSNT_04345___ 779 TCCTGGCGAAAAGCCGTCCGAAAAAG----GATTAG 810
|.|||||.||||.|||.||.|||||| ||
BL00047___ytp 779 TTCTGGCTAAAAACCGCCCTAAAAAGAAATGA---- 810
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