Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04346 and BL00046

See Amino acid alignment / Visit BSNT_04346 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:30
# Commandline: needle
#    -asequence dna-align/BSNT_04346___ytpP.1.5803.seq
#    -bsequence dna-align/BL00046___ytpP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04346___ytpP-BL00046___ytpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04346___ytpP-BL00046___ytpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04346___ytpP
# 2: BL00046___ytpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     242/324 (74.7%)
# Similarity:   242/324 (74.7%)
# Gaps:           3/324 ( 0.9%)
# Score: 883.0
# 
#
#=======================================

BSNT_04346___      1 ATGAAAAAAATTGAATCAACTCAAGAGCTGGAAAAAGCGGTAAAGGATGA     50
                     |||||||..||.||..|.|.|.||||..||.||||||..||.||.||.||
BL00046___ytp      1 ATGAAAACGATCGAGACGAATGAAGAATTGCAAAAAGTTGTGAAAGACGA     50

BSNT_04346___     51 TTGGTCTGTATTTATGTTTTCAGCCGATTGGTGCCCGGATTGCCGTTTTG    100
                     ||..||..|.||.||||||||.||.||.|||||.|||||.||||||||||
BL00046___ytp     51 TTTATCCTTGTTGATGTTTTCGGCTGACTGGTGTCCGGACTGCCGTTTTG    100

BSNT_04346___    101 TAGAGCCTTTCCTGCCTGAATTGGAAGCGAATTTCCCTGAATTCACCTAC    150
                     ||||.|||||..||||.||..|.||||||||.|..||.|||||.||.|.|
BL00046___ytp    101 TAGAACCTTTTTTGCCCGAGCTTGAAGCGAACTATCCGGAATTTACATTC    150

BSNT_04346___    151 TACTACGTAGACCGTGACAAATTCATTGATACATGTGCAGAGTGGGAAAT    200
                     ||.||.||.|||||.||||||||.||.||.||.||.||.||||||||.||
BL00046___ytp    151 TATTATGTTGACCGCGACAAATTTATAGACACGTGCGCGGAGTGGGATAT    200

BSNT_04346___    201 TTACGGAATCCCAAGCTTTGTGGTGTTTAATGAAGGAAAAGAAGTAAATC    250
                     ||.|||||||||||||||..|.||.|||||.||||||||.|||.|.|..|
BL00046___ytp    201 TTTCGGAATCCCAAGCTTCCTCGTATTTAAAGAAGGAAACGAAATCAGCC    250

BSNT_04346___    251 GTTTTGTGAGCAAAGACCGCAAAACAAAAGAAGAAATTGAACAGTTTTTA    300
                     |.|||||.|||||||||||.|||||.|||||.|||||.||.||.|||||.
BL00046___ytp    251 GCTTTGTCAGCAAAGACCGGAAAACGAAAGAGGAAATCGAGCAATTTTTG    300

BSNT_04346___    301 ACAGACTCTCTCGCTAAAGCGTAA    324
                     ||.||.||.||...|||   |||.
BL00046___ytp    301 ACCGATTCACTGAATAA---GTAG    321


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