Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04350 and BL00045
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:30
# Commandline: needle
# -asequence dna-align/BSNT_04350___ytoP.1.5803.seq
# -bsequence dna-align/BL00045___ytoP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04350___ytoP-BL00045___ytoP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04350___ytoP-BL00045___ytoP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04350___ytoP
# 2: BL00045___ytoP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity: 799/1101 (72.6%)
# Similarity: 799/1101 (72.6%)
# Gaps: 54/1101 ( 4.9%)
# Score: 2838.0
#
#
#=======================================
BSNT_04350___ 1 ATGAATCAAGAAACGAAAGCGCTTTTCCAAACACTGACGCAGCTTCCCGG 50
||||||||.|||||||.|.|||||||.|||||.||.|||.||||.|||||
BL00045___yto 1 ATGAATCAGGAAACGAGAACGCTTTTTCAAACGCTTACGGAGCTCCCCGG 50
BSNT_04350___ 51 CGCGCCGGGCAATGAGCATCAGGTTCGT-GCTTTTATGAAGCAGGAGCTA 99
|||.|||||.||.||.||||..||.||| || ||.|||||..|.|||||.
BL00045___yto 51 CGCCCCGGGAAACGAACATCTTGTCCGTCGC-TTCATGAAAAAAGAGCTT 99
BSNT_04350___ 100 GCCAAATATGCCGATGACATCGTTCAGGACAGACTGGGAAGTGTTTTCGG 149
|..||||||||.|||||.|||.|.|||||||||||.|||||.||.|||||
BL00045___yto 100 GAAAAATATGCTGATGAGATCATCCAGGACAGACTTGGAAGCGTGTTCGG 149
BSNT_04350___ 150 AGTCAGACGAGGCGCAGAGGACGCA--CCGAGAATTATGGTAGCCGGGCA 197
.||.|.||..||..|.|| |.||| ||.|.|||||||||.|||||.||
BL00045___yto 150 CGTTAAACATGGACCTGA--AGGCAGTCCAAAAATTATGGTGGCCGGCCA 197
BSNT_04350___ 198 CATGGACGAAGTCGGCTTCATGGTGACATCCATTACAGACAACGGGCTGC 247
.|||||.|||||.||.||.|||||.|||||.||||||||.|||||.||||
BL00045___yto 198 TATGGATGAAGTGGGGTTTATGGTCACATCAATTACAGATAACGGCCTGC 247
BSNT_04350___ 248 TCAGATTCCAGACGCTCGGAGGCTGGTGGAGCCAGGTTTTGCTTGCGCAG 297
|..|.||.||.|||||.||.|||||||||||.||||||||..|.||.|||
BL00045___yto 248 TTCGGTTTCAAACGCTGGGCGGCTGGTGGAGTCAGGTTTTATTGGCCCAG 297
BSNT_04350___ 298 CGGGTTGAAATTCAAACAGATAACGGGCCGGTTCCGGGTGTGATTTCAAG 347
|||||.|||||.||.||.||.|||||.|||.|.||.||.||.||..|.||
BL00045___yto 298 CGGGTGGAAATCCACACGGACAACGGACCGATCCCCGGCGTCATCGCGAG 347
BSNT_04350___ 348 CATACCGCCGCATTTATTGACAGATGCGCAGCGAAACCGTCCGATGGATA 397
||..||.||.|||.|.||||||||||.||||.|.|..|||||||||||||
BL00045___yto 348 CACGCCTCCTCATCTTTTGACAGATGAGCAGAGGAGACGTCCGATGGATA 397
BSNT_04350___ 398 TCAAGAACATGATGATCGACATTGGAGCGGATGATAAGGAAGACGCCATC 447
||||.|||||||||||.||.||.||.||||||||.|.||||||.|| |
BL00045___yto 398 TCAAAAACATGATGATTGATATCGGGGCGGATGACAGGGAAGATGC---C 444
BSNT_04350___ 448 AAA---ATCGGCATTAAACCGGGACAGCAGATCGTGCCTGTTTGTCCGTT 494
.|| |||||..|.|||||.||.|||||.|||||.||..|.||||||||
BL00045___yto 445 GAACGCATCGGTGTCAAACCAGGCCAGCAAATCGTACCGATCTGTCCGTT 494
BSNT_04350___ 495 TACGACGATGGCGAATGAAAAGAAAATTTTATCAAAAGCATGGGATAACA 544
|||..|||||||.|||||||||||.||..|..|.|||||||||||||||.
BL00045___yto 495 TACCCCGATGGCAAATGAAAAGAAGATCCTTGCGAAAGCATGGGATAACC 544
BSNT_04350___ 545 GATATGGATGCGGCTTAAGCATTGAACTTCTGAAGGAATTACACGGTAAA 594
|.||.||.|||||..|.|||||||||.|.|||||.|||.|.||.||.|.|
BL00045___yto 545 GCTACGGCTGCGGACTCAGCATTGAATTGCTGAAAGAACTGCAAGGAACA 594
BSNT_04350___ 595 GAGCTTCCGAATACACTCTATGCGGGTGCAACGGTTCAGGAAGAAGTAGG 644
||.||||||||.|..||.||..|.|||||.||.||.||||||||..|.||
BL00045___yto 595 GAACTTCCGAACAATCTTTACTCAGGTGCGACCGTCCAGGAAGAGCTCGG 644
BSNT_04350___ 645 GCTAAGGGGCGCGCAGACGGCTTCTCATATGATTAAACCGGACTTGTTTT 694
...|||.||||||||.||.||..|..|||||||..|.||.||||||||||
BL00045___yto 645 AACAAGAGGCGCGCAAACTGCGGCCAATATGATACAGCCTGACTTGTTTT 694
BSNT_04350___ 695 TCGCCCTTGACGCCAGCCCGGCAAACGATATGAGCGGAGACAAAAATGAA 744
||||.|||||.||.||.||||||||||||..||||||.|||||||||.||
BL00045___yto 695 TCGCGCTTGATGCAAGTCCGGCAAACGATTCGAGCGGCGACAAAAATCAA 744
BSNT_04350___ 745 TTCGGCCAGCTTGGAAAAGGCTTTTTGCTGCGCATTCTTGACAGAACGAC 794
||.|||||||||||.|||||..|..||.||.|.|||.|.|||.|.||.|.
BL00045___yto 745 TTTGGCCAGCTTGGCAAAGGAGTGCTGTTGAGGATTTTCGACCGGACCAT 794
BSNT_04350___ 795 AGTCATGCATCGCGGAATGAGGGAATTCGTTCTTGATATGGCTGAAACGC 844
.||.|||.|..|||.||||||..|.||.||.||.||||.|||.||.||..
BL00045___yto 795 GGTGATGGACAGCGAAATGAGAAATTTTGTGCTGGATACGGCAGAGACAA 844
BSNT_04350___ 845 ATGATATTCCATATCAATATTTTG--TATCCGGCGGGGGAACAGACGCAG 892
||||.||.||.||||||||||||| |.|||| ||.|||||.|||||.|
BL00045___yto 845 ATGACATCCCGTATCAATATTTTGTTTCTCCG--GGAGGAACCGACGCCG 892
BSNT_04350___ 893 GCAAGGTTCATATTTC----GAACAGCGGTGTGCCGTCAGCGGTTATCGG 938
||...|||||.||.|| ||| ||.||.||.||.||.||.||.||
BL00045___yto 893 GCCGTGTTCACATCTCAAATGAA----GGCGTTCCTTCGGCCGTGATTGG 938
BSNT_04350___ 939 AATATGTTCCCGCTATATTCATACAAACGCTTCTATCATTCATATTGATG 988
.||.|||||..|.||.||.||||||...|||||.||.||.||..||||||
BL00045___yto 939 CATTTGTTCAAGATACATCCATACATCTGCTTCCATTATCCACGTTGATG 988
BSNT_04350___ 989 ATTATGCTGCTGCTAAAGAAATGCTCATCAAACTTGTAACAGCCTGCGAT 1038
|.||...||||||.||||||.||||.|||||.|||||.|.|||.|||||
BL00045___yto 989 ACTACCTTGCTGCAAAAGAATTGCTGATCAAGCTTGTCAAAGCTTGCGA- 1037
BSNT_04350___ 1039 AAGCAG---------ACGGTGGA---TGCGATTAAAGA---AAATATGTA 1073
||| .|.||.|| ||||| ||.|| |
BL00045___yto 1038 ---CAGTTCTGCCGTCCAGTCGATTTTGCGA--AATGAGTGA-------- 1074
BSNT_04350___ 1074 G 1074
BL00045___yto 1074 - 1074
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