Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04369 and BL00035
See
Amino acid alignment /
Visit
BSNT_04369 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_04369___pepV.1.5803.seq
# -bsequence dna-align/BL00035___ytjP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04369___pepV-BL00035___ytjP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04369___pepV-BL00035___ytjP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04369___pepV
# 2: BL00035___ytjP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1516
# Identity: 967/1516 (63.8%)
# Similarity: 967/1516 (63.8%)
# Gaps: 248/1516 (16.4%)
# Score: 3003.5
#
#
#=======================================
BSNT_04369___ 1 ATGAACTGGGAAGTTGAAGTGATCAGAAAAAAAGA-GGATTTAATTCGT- 48
||||||||||||...|||||..| ||||||| |||.|.|..||||
BL00035___ytj 1 ATGAACTGGGAACAGGAAGTTTT-----AAAAAGACGGAATGAGATCGTT 45
BSNT_04369___ 49 ---GATACGCAGGAATTTTTGAGAATCAACAGTGTCATGGACGAAACAAC 95
||||..||||..|||||.|.|||||||||.|||.|.||||||...||
BL00035___ytj 46 GAGGATATTCAGGGTTTTTTAAAAATCAACAGCGTCCTTGACGAAGAGAC 95
BSNT_04369___ 96 CGCCGGACC----CGGTAAACCGTTTGGAGAAGGGGTAAACGCCAGCCTG 141
.||.||.|| ||| |||||||||.|||||.|..|.|...|||||
BL00035___ytj 96 GGCGGGTCCGGGACGG----CCGTTTGGAAAAGGGATTCAAGAATGCCTG 141
BSNT_04369___ 142 ACTTCATTGCTGGAGCT--TGGAGAAA----AAGAA---GGCTTTACAAC 182
|| .|.||| ||.|.||| |.||| ||.|||||...
BL00035___ytj 142 AC---------AGCGCTTCTGAATAAAGGGGAGGAAAGCGGGTTTACGGT 182
BSNT_04369___ 183 AAAAAATCTTGACGGCTTTGCAGGTCATATTGAATGGGGGGAGGGCGATG 232
||||||.||||||||.|.||||||.|||||.|||||||||.|.|||||.|
BL00035___ytj 183 AAAAAACCTTGACGGTTATGCAGGCCATATCGAATGGGGGAAAGGCGAGG 232
BSNT_04369___ 233 ACATTATCGGCGTACTTTGCCATGTTGACGTCGTGCCGCCGGGAGATGGG 282
|.|||||||||||.||||||||..||||.|||||.||.||.||.|||||.
BL00035___ytj 233 AGATTATCGGCGTGCTTTGCCACATTGATGTCGTTCCTCCCGGCGATGGA 282
BSNT_04369___ 283 TGGACGAGTGATCCATTTTCAGCTGAAATCCGCAA----CGGACGGATTT 328
||||||||.||.||.|||.|||||||||| || |||.||.||.|
BL00035___ytj 283 TGGACGAGCGACCCGTTTGCAGCTGAAAT----AAGGGGCGGCCGAATCT 328
BSNT_04369___ 329 ATGCAAGGGGCGCCATTGATGACAAAGGCCCGACAATGGCGGCATTCTAC 378
|||||||.||.||..|||||||.|||||.|||||||||||.||.||..|.
BL00035___ytj 329 ATGCAAGAGGAGCGCTTGATGATAAAGGGCCGACAATGGCCGCGTTTCAT 378
BSNT_04369___ 379 GCGCTGAAAATCGTGAAAGACATGAATTTGCCCC----TGTCCAAGCGAG 424
||..|.|||||.||.||||||..| .|||.| |.||.||.||..
BL00035___ytj 379 GCATTAAAAATTGTCAAAGACTCG----GGCCTCCCTTTATCAAAACGGA 424
BSNT_04369___ 425 TCAGAATGATTATCGGAACAGATGAAGAAAGTGATTGGAGATGCGTAGAG 474
|||||||||||||.|||||.|||||||||||.||.|||.|.||.||.|||
BL00035___ytj 425 TCAGAATGATTATTGGAACCGATGAAGAAAGCGACTGGCGCTGTGTGGAG 474
BSNT_04369___ 475 CATTATTTCAAGCATGAAGAAATGCCAACAATGGGC----TTTGCGCCTG 520
|||||.||.||.||.||||||||||| .|.||| ||||||||||
BL00035___ytj 475 CATTACTTTAAACACGAAGAAATGCC----TTCGGCCGGTTTTGCGCCTG 520
BSNT_04369___ 521 ACGCCGATTTTCCGATCATTAATGCGGAAAAAGGGATCATCGATGCTTCT 570
|.||.|||||||||||.||..||||.||||||||..|.||.||.||..||
BL00035___ytj 521 ATGCTGATTTTCCGATTATCTATGCAGAAAAAGGCCTGATTGACGCAGCT 570
BSNT_04369___ 571 TTACTTATTCCACACCGTCCAAATCAAGCAGAACCAAAGGCAGTGC---- 616
|||...||| .|.||.| ||||.||.|||.|| .||||
BL00035___ytj 571 TTAAAAATT-GAAACTG-----ATCAGGCGGAAACA-----GGTGCGGAC 609
BSNT_04369___ 617 -TTGTCT------CGTTTCAATCAGGCCTTCGTTTGAACATGGTGCCTGA 659
|.||.| |.||.|..||.||||..||..||||||||||||||||
BL00035___ytj 610 TTAGTATTGGAGGCATTCCGGTCCGGCCGGCGCCTGAACATGGTGCCTGA 659
BSNT_04369___ 660 TGCTGCGGAAGCTGTCATTGAAGGG------CCG---AAAAATGAAGAGA 700
||.|||||||||.|||.|.|.|||| ||| .||..|||||||
BL00035___ytj 660 TGATGCGGAAGCCGTCCTGGCAGGGGCCGTCCCGTCAGAATTTGAAGAG- 708
BSNT_04369___ 701 TTCTGTCTTCATTT------------AAAGACATGCTCCGCACGACGGAC 738
|||||| |||||.|..| .|||| ||.||.|
BL00035___ytj 709 --------TCATTTGCCCGGTTTGTAAAAGAAAAAC-GCGCA-GAAGGGC 748
BSNT_04369___ 739 --------CAAAAAGG-GGAAGCTGCAATAGAGAACGGACAGCTCATTTT 779
|||.|||| ||.|| ||.|| ||||..
BL00035___ytj 749 GTATTCTTCAAGAAGGCGGCAG------------ACTGA-----CATTAA 781
BSNT_04369___ 780 GCGTATGTACGGTCTTTC--CTGCCATGCGATGGAACCGAACAATGGGAT 827
.|| ||.||||....|| || |||||.||||||||.||.||.||..|
BL00035___ytj 782 CCG--TGCACGGCAAATCGGCT--CATGCCATGGAACCTAATAACGGAGT 827
BSNT_04369___ 828 CAATGCCGGTATTTTATTGTGCGAATTTCTCCA-GCAGACTGAGCTTGAC 876
||||||||||.|..|.|||..|||.|||.|.|| .||.|.| ..||||||
BL00035___ytj 828 CAATGCCGGTCTCATTTTGGCCGAGTTTTTACATACACAAT-CCCTTGAC 876
BSNT_04369___ 877 GATGCAGGAAAGCGG--------TTTGTGCAAGTTGTGACAGATAAG--- 915
|.|||.| |||||.||| || |.|.||
BL00035___ytj 877 --------AGAGCCGGGCTCCATTTTGTTCAA------AC-GGTTAGCGG 911
BSNT_04369___ 916 ----TTCTCAGGTGATACAAGAGGAAAAAAACTGGACATCGACTGTGAGG 961
||..|.||.|||||.|||||.|||||..|.|.|||||.|||....|
BL00035___ytj 912 GGCTTTTGCCGGAGATACGAGAGGGAAAAAGATCGGCATCGGCTGCCGCG 961
BSNT_04369___ 962 ATGAAATCAGCGGTGAGCTGACATTAAATGTCGGAACACTGCGCTATAAA 1011
||||.||||||||.||||||||..|.||||||||....||||..|||.||
BL00035___ytj 962 ATGACATCAGCGGAGAGCTGACGCTGAATGTCGGCCGGCTGCAGTATGAA 1011
BSNT_04369___ 1012 GAAGGGCAAGGAGGCGAGCTCGGGATCAATATCCGCTATCCTGTGACAGC 1061
.||||..||||.||.|||..|...||.||.||||||||||||||.||.|.
BL00035___ytj 1012 CAAGGAAAAGGCGGGGAGGCCCATATTAACATCCGCTATCCTGTTACTGA 1061
BSNT_04369___ 1062 AGAAAGC---------AAAGCGATTCGCGATGCATTCGAAAGT------- 1095
|||.||| |||.| || .||.|||..||.|
BL00035___ytj 1062 AGAGAGCGGCCGGGTGAAATC------CG-GGCTTTCACAAATAAAAGGC 1104
BSNT_04369___ 1096 -----GCATCTGAATTTGATCTGGGAGAATTCAAAGACAGCAAGCCGCAT 1140
|| |.|||.| .||.||||||||||||||.|||
BL00035___ytj 1105 GCCCGGC---------TCATCAG-----CTTTAAAGACAGCAAGCCACAT 1140
BSNT_04369___ 1141 CACGT-------GACCGCAGATCATCCGTTAGTCAAAACCCTGCAAAAGG 1183
||.|| |||| ||.|.| |..|||||||.|||||...||
BL00035___ytj 1141 CATGTAGCAAAAGACC----ATGAAC---TGATCAAAACGCTGCAGCGGG 1183
BSNT_04369___ 1184 TTTATGAAGGCCAG-CTGGGTAAAAAAGCTGACTTAATCTCAATCGGCGG 1232
|.|||||||..||| |.||| .|||..||..|.|||||.||.||||||||
BL00035___ytj 1184 TCTATGAAGAGCAGACAGGG-GAAACGGCACAATTAATTTCCATCGGCGG 1232
BSNT_04369___ 1233 GGGGACATATGCGAGATCCTTAAAAGCCGGTGTCGCGTTCGGCCCGCTGT 1282
||.|||||||||..||||..|.||||||||.||.||.|||||||||||||
BL00035___ytj 1233 GGCGACATATGCACGATCACTGAAAGCCGGCGTGGCATTCGGCCCGCTGT 1282
BSNT_04369___ 1283 TCCCCGGACGCCCTGACAGCGCACACCAAAAGGATGAATATATCGAAATT 1332
|.||.||.||.||||||...||.||.||.||.||.||.|||||.|||||.
BL00035___ytj 1283 TTCCAGGCCGTCCTGACGTTGCCCATCAGAAAGACGAGTATATGGAAATC 1332
BSNT_04369___ 1333 GATGACCTGCTGA------GATCGACAGCGTTATATGCTCAGGCCATTTA 1376
||.||..|||||| .||||| |.|||||.|||||||||||
BL00035___ytj 1333 GACGATTTGCTGAAGGCTGTATCGA------TTTATGCACAGGCCATTTA 1376
BSNT_04369___ 1377 CGAGCTTGCAAAATAA 1392
.||..|.||.||.||.
BL00035___ytj 1377 TGAATTGGCGAAGTAG 1392
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.