Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04385 and BL00026
See
Amino acid alignment /
Visit
BSNT_04385 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:33
# Commandline: needle
# -asequence dna-align/BSNT_04385.1.5803.seq
# -bsequence dna-align/BL00026___yteT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04385-BL00026___yteT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04385-BL00026___yteT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04385
# 2: BL00026___yteT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1375
# Identity: 690/1375 (50.2%)
# Similarity: 690/1375 (50.2%)
# Gaps: 494/1375 (35.9%)
# Score: 2231.5
#
#
#=======================================
BSNT_04385 1 ---------------------------------------------ATGTT 5
|||||
BL00026___yte 1 ATGAAAAAATATGCGATATGCGGTCTGAGCGGCCGCGCTTTTAACATGTT 50
BSNT_04385 6 TATCAAACCGCTGTTGGAGCGGTTTTCAACTCATTATGAGATTACGGGA- 54
||||.|.||.|||.||| ||.|.|||||||
BL00026___yte 51 TATCGAGCCTCTGGTGG--------------------GAAAATACGGGAA 80
BSNT_04385 55 --------------TTGC-----TGGATGCCGATCC----------GAAA 75
.||| ||||...|||||| |||
BL00026___yte 81 AGAAAACCGCATCGCTGCGCTCTTGGACATCGATCCGCTGAGGGAGGAA- 129
BSNT_04385 76 CGTTTTGCCGTTTGCAAAAAGAAA--TTTCCCGAGC-TGGCCCACGTGCC 122
||.||| ||||||| |||||.|.|| |.|||| |||.||
BL00026___yte 130 ---------GTCTGC--AAAGAAAGGTTTCCGGCGCTTCGCCC-CGTCCC 167
BSNT_04385 123 CGAGTTTAGCGAAG---ATGCTTTTGACGAGATGATGCGCGTGTCA---- 165
||||..||||| |.||.|||..|||.|| ||.||.||
BL00026___yte 168 ---GTTTTTCGAAGAGAAAGCGTTTACCGAAAT-----GCTTGACAAAAT 209
BSNT_04385 166 -AAGCCTGATATCGTCATTGTGGCAGGCAGGGACGATACGCATGTCAC-- 212
|||||.||...|.|.|||||.||||||.|.||.|||||||||||| |
BL00026___yte 210 CAAGCCGGACGCCATTATTGTAGCAGGCCGTGATGATACGCATGTC-CGC 258
BSNT_04385 213 -ATATATTGTAAAAAGC-CTT------CAGTGGAATACAGATGTAATTAC 254
|||||||| .|| ||| ||| |||..||.||.||.||
BL00026___yte 259 TATATATTG-----GGCGCTTTACGGGCAG----ATATTGACGTGATCAC 299
BSNT_04385 255 TGAAAAACCAATGGTGACAACAGTGCAGGATGCGAATCTG--GTGCTTGA 302
||||||.||.|||||||||||.|..|.||||||| .|.| |||.|..|
BL00026___yte 300 TGAAAAGCCGATGGTGACAACGGCACGGGATGCG--GCAGCCGTGTTAAA 347
BSNT_04385 303 AGCGGAGGCCAAAAGCGAAGGAAAAGTCACCGTCGCGTTTAACTATCGCT 352
|||.||.|||.|.|||.||||||||||.|||||..|||||||||||||||
BL00026___yte 348 AGCCGAAGCCGAGAGCAAAGGAAAAGTGACCGTTACGTTTAACTATCGCT 397
BSNT_04385 353 ACAGCCCGTTTCATCGGAAAATAAAAGAAATGATTCTGGACGGAAAAATA 402
|||..||||..||.||.||.||.|||||..||||.||.||||||||..|.
BL00026___yte 398 ACAATCCGTACCACCGCAAGATCAAAGAGCTGATACTTGACGGAAAGCTT 447
BSNT_04385 403 GGCAGGGTCACCTCCGTTGATTTAAATTGGTATATTGATACGTATCATGG 452
||||.|.|.||.||.||||||||.||.|||||.||.|||||||||||.||
BL00026___yte 448 GGCACGATTACGTCGGTTGATTTGAACTGGTACATCGATACGTATCACGG 497
BSNT_04385 453 CGCCAGCTATTTTAAACGCTGGAACAGGTCGAGA-CAGTTTTCCGGGGGT 501
|||.||||||||||||||||||||||||..|||| || ||.||.||.|||
BL00026___yte 498 CGCAAGCTATTTTAAACGCTGGAACAGGATGAGAGCA-TTCTCAGGCGGT 546
BSNT_04385 502 CTTTCTGTCCATAAATCAACACATCACTTTGATCTCGTCAATTGGTGGCT 551
|||||.||||||||.|||||.|||||.||.|||||.||||||||||||||
BL00026___yte 547 CTTTCCGTCCATAAGTCAACCCATCATTTCGATCTTGTCAATTGGTGGCT 596
BSNT_04385 552 CGGGCAAAATCCGGAAGAGGTATTTGCTTATGGCGCCTTGAATTACTATG 601
.|..||||..||....|||||.|||||.||.||||...||.|.|||||
BL00026___yte 597 TGATCAAACGCCCAGCGAGGTTTTTGCCTACGGCGGTCTGTACTACTA-- 644
BSNT_04385 602 GGCCGGAC----------AGTGAGTGGAACCCCTTGCCGGAAGAAGACGG 641
||||| |.|||.| ||.|||.||| ||
BL00026___yte 645 ---CGGACCCCGCGGCGAAATGAAT-----------CCTGAAAAAG--GG 678
BSNT_04385 642 G-----CGTTTTTGCGGGACGTGCCGGGTCAAAGAA-AAATGCCACTACT 685
| ||.|.||||||.||.||||..||| ||||| |||||||.|||.|
BL00026___yte 679 GAAAACCGCTATTGCGGAACATGCCATGTC-AAGAAGAAATGCCGCTATT 727
BSNT_04385 686 ATTCAAGGTGGCATCC--CCGTTCCTCTAAAGCTTCTATAAAGGATGATC 733
||...||||||||..| .||..||.| ||||.||.|
BL00026___yte 728 ATATGAGGTGGCAGGCAGGCGACCCGC--------------AGGACGACC 763
BSNT_04385 734 ATCTCGAAGCAGGAGACCAGT-----CCAGC-----TTATATACTGCATA 773
||.|| .||||||.| ||||| .|.|||||.|..||
BL00026___yte 764 ATGTC-------AAGACCAATGAAAGCCAGCATCTGCTCTATACCGATTA 806
BSNT_04385 774 CAGGCCTGACGCGTGTATTTTTGACGAGGAAATTGACATCGAGGATACGT 823
|||||||||||||||||||||.||.||.|||||.||||||||||||||||
BL00026___yte 807 CAGGCCTGACGCGTGTATTTTCGATGAAGAAATCGACATCGAGGATACGT 856
BSNT_04385 824 ACGTGGCGGCAGTCAAATATGATGGC---GGCGCACTGTTAAGCTACTCG 870
|.|..||.|...|.|||| |.||| ||.||.|||.|.|..|||||.
BL00026___yte 857 ATGCAGCCGTTTTGAAAT---ACGGCAAAGGGGCGCTGCTGAATTACTCC 903
BSNT_04385 871 ATTATTTTTTCGGCCCCGTATGAAGGTTACCGGCTGACGATCAACGGCAC 920
.||..||||||.||||||||||||||.||||||||..|.||||||||.||
BL00026___yte 904 GTTCATTTTTCAGCCCCGTATGAAGGCTACCGGCTTGCAATCAACGGGAC 953
BSNT_04385 921 AAAAGGGCGTATTGAATCAAATGAATTTCA-----CGTCCAGAATTCCGT 965
|||.||..|..|||||.||.|.||||.||| ||.|.|||.|.||.|
BL00026___yte 954 AAAGGGAAGGCTTGAAACACAGGAATATCATGCTCCGGCAAGAGTCCCAT 1003
BSNT_04385 966 TTGCTTTTCCTGA------------------------------------- 978
|||...||||.||
BL00026___yte 1004 TTGAAGTTCCCGAACAGACCATCGATTATTATCCGCTGTTTGAATCGAAA 1053
BSNT_04385 978 -------------------------------------------------- 978
BL00026___yte 1054 GAAACGATTCGCGTCGTCAGGCAGCCCGGCGGGCATGGCGGAGGAGACCC 1103
BSNT_04385 978 -------------------------------------------------- 978
BL00026___yte 1104 GCTGCTTTTGGAGGAGCTGTTTGGCGGAGGAGACCCTTTGAGGAATTACG 1153
BSNT_04385 978 -------------------------------------------------- 978
BL00026___yte 1154 ACATTCTGGCCGGTGCCGAAGCAGGCGCCTATTCAATTGCAGCCGGCGAG 1203
BSNT_04385 978 -------------------------------------------------- 978
BL00026___yte 1204 GCATTGTGGCGCTCCATCAAAGAAAAAAAGCCGATAGGAATCAGTGAACT 1253
BSNT_04385 978 ------------------------- 978
BL00026___yte 1254 TCTGCATACCCGGCAATATACATAA 1278
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.