Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04389 and BL00023

See Amino acid alignment / Visit BSNT_04389 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence dna-align/BSNT_04389.1.5803.seq
#    -bsequence dna-align/BL00023.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04389-BL00023.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04389-BL00023.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04389
# 2: BL00023
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 991
# Identity:     759/991 (76.6%)
# Similarity:   759/991 (76.6%)
# Gaps:          50/991 ( 5.0%)
# Score: 2928.0
# 
#
#=======================================

BSNT_04389         1 ATGAAAACAGCAGAAGCGCA-AGCG--------CCGGC---TGTTGATGC     38
                     ||||||.||||.||.|..|| |.||        |||||   |||||.|| 
BL00023            1 ATGAAAGCAGCCGATGTCCAGACCGGAAAAAATCCGGCCCTTGTTGTTG-     49

BSNT_04389        39 AGTCATTTTTAAAAAAGAAAAAA--GAAAG-CGC----TTACTAAGCAAG     81
                                     |||||||  ||||| |||    ||...||  |||
BL00023           50 ----------------GAAAAAAACGAAAGACGCGTTTTTGGGAA--AAG     81

BSNT_04389        82 CTGAATCAGCAAAAATATTTGTACTTGATGATTTTGCCGGG-GTGTATTT    130
                     ||....||||||||||||||.||.||||||||||||||||| .|| ||||
BL00023           82 CTTCTCCAGCAAAAATATTTATATTTGATGATTTTGCCGGGACTG-ATTT    130

BSNT_04389       131 ATTTTTTGCTTTTTAAGTATGTTCCGATGTGGGGAATTGTGATTGCGTTT    180
                     ||||||||||||||||||||||.|||||||||||.|||||.||.||||||
BL00023          131 ATTTTTTGCTTTTTAAGTATGTGCCGATGTGGGGGATTGTCATAGCGTTT    180

BSNT_04389       181 CAGGATTATCAGCCGTTCCTCGGCATTTTGGGCAGTGAGTGGGTGGGGCT    230
                     ||||||||.||||||||.||||||||...|||.||.||.||||||||..|
BL00023          181 CAGGATTACCAGCCGTTTCTCGGCATAACGGGGAGCGAATGGGTGGGCTT    230

BSNT_04389       231 GAAGCATTTTATCAGGCTGTTTACTGAGCCTACATTTTTTCTCTTGTTAA    280
                     .|||||||||...|||||||||||.||.||.||.||||||.|..||||.|
BL00023          231 TAAGCATTTTGAAAGGCTGTTTACCGAACCGACGTTTTTTATGCTGTTGA    280

BSNT_04389       281 AAAACACGCTCGTGTTATTTGCTTTGAACCTGGCCATATTTTTCCCGGTG    330
                     |.||.||..|..|.||.|||..|.|.|||||.|...||||.||.|||.|.
BL00023          281 AGAATACATTGATTTTGTTTTTTCTCAACCTTGTTGTATTCTTTCCGATA    330

BSNT_04389       331 CCGATACTGCTGGCGCTTTTATTGAACGAAGT-----GCGGATTGCTCTC    375
                     |||||..|..||||||||||||||||.|||||     .||.||||     
BL00023          331 CCGATTATTTTGGCGCTTTTATTGAATGAAGTCAGAGTCGCATTG-----    375

BSNT_04389       376 TTTAAAAAATTTGTTCAGACGCTGATTTATATCCCGCATTTTATGTCTTG    425
                     ||.|||||.|||||.|||||||||||.|||||.||||||||||||||.||
BL00023          376 TTCAAAAAGTTTGTCCAGACGCTGATCTATATTCCGCATTTTATGTCATG    425

BSNT_04389       426 GGTCATTGTTGTATCACTTTCGTTTGTGCTGTTAACGGTAGACGGAGGCT    475
                     |||||||||.|||||.|||||.||.||.|||||.||.||.||||||||.|
BL00023          426 GGTCATTGTGGTATCGCTTTCTTTCGTCCTGTTGACTGTTGACGGAGGAT    475

BSNT_04389       476 TGATTAATGAACTGATTGTGTTTTTTGGCGGTGAAAAAATCAATTTTCTG    525
                     ||||.|||||..|.||.|..|..||.|||||.|||||.|||||||||.||
BL00023          476 TGATCAATGAGATTATCGCCTACTTCGGCGGAGAAAAGATCAATTTTTTG    525

BSNT_04389       526 CTGAACGAAGAATGGTTCCGGCCCCTGTATATTCTGCAGGTTATCTGGAG    575
                     |||||.|||...||||||.||||..||||.|||||.|||||.||||||||
BL00023          526 CTGAATGAAAGCTGGTTCAGGCCGATGTACATTCTTCAGGTCATCTGGAG    575

BSNT_04389       576 GGAAGCGGGCTGGTCGACGATCATTTATCTGGCGGCCATTACAGCGGTTG    625
                     ||||||.|||||||||||||||||.|||.|||||||.||||||||.||.|
BL00023          576 GGAAGCCGGCTGGTCGACGATCATCTATTTGGCGGCGATTACAGCTGTCG    625

BSNT_04389       626 ACCCCCAGCTGTATGAAGCGGCGAAAATGGACGGAGCGGGACGGCTGCGG    675
                     |.||.|||||.||.||||||||||||||||||||.||....||.|||.||
BL00023          626 ATCCGCAGCTTTACGAAGCGGCGAAAATGGACGGGGCCAATCGCCTGAGG    675

BSNT_04389       676 CAAATGTGGCATATTACGCTTCCCGCCATTAAAAGCGTTATCGTCGTTTT    725
                     ...|||||||||.|.||.||||||||.||.|.||||||.|||||||||||
BL00023          676 AGGATGTGGCATGTCACACTTCCCGCGATCAGAAGCGTCATCGTCGTTTT    725

BSNT_04389       726 GCTGATTTTGAAAATCGGAGACACGCTGGAGCTTGGCTTCGAGCATGTGT    775
                     ||||||.|||||||||||.||.|||||.||.||.|||||.||||||||||
BL00023          726 GCTGATCTTGAAAATCGGCGATACGCTCGAACTCGGCTTTGAGCATGTGT    775

BSNT_04389       776 ATTTGCTGTTAAATGCGACTAACAGGGAAGTGGCGGAAATTTTTGATACG    825
                     ||.||||.||.|||||.||.|||.|.||||||||.|||||.|||||||||
BL00023          776 ATCTGCTTTTGAATGCAACGAACCGCGAAGTGGCCGAAATCTTTGATACG    825

BSNT_04389       826 TATGTTTATACTGCAGGGCTGAAACAGGGCCAATTCAGCTACAGTACAGC    875
                     |||||.||.||.||.|||.|.||.|||||.||.|||||||||||||||||
BL00023          826 TATGTATACACGGCCGGGTTAAAGCAGGGACAGTTCAGCTACAGTACAGC    875

BSNT_04389       876 AGTCGGCGTATTTAAAGCGGCGGTCGGGCTGATTTTGGTCATGCTAGCGA    925
                     .|||||..||||||||||.||.|||||.||.|||.|.|||.|..|.||.|
BL00023          876 CGTCGGTTTATTTAAAGCAGCTGTCGGTCTCATTCTTGTCGTATTTGCAA    925

BSNT_04389       926 ATCGTTTGGCGAAGAAATTTGGCGAGGAAGGAATTTATTAA    966
                     |..|..||||||||||||||||.||.|||||.||.||||||
BL00023          926 ACAGGATGGCGAAGAAATTTGGAGAAGAAGGGATATATTAA    966


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