Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04389 and BL00023
See
Amino acid alignment /
Visit
BSNT_04389 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:33
# Commandline: needle
# -asequence dna-align/BSNT_04389.1.5803.seq
# -bsequence dna-align/BL00023.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04389-BL00023.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04389-BL00023.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04389
# 2: BL00023
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 991
# Identity: 759/991 (76.6%)
# Similarity: 759/991 (76.6%)
# Gaps: 50/991 ( 5.0%)
# Score: 2928.0
#
#
#=======================================
BSNT_04389 1 ATGAAAACAGCAGAAGCGCA-AGCG--------CCGGC---TGTTGATGC 38
||||||.||||.||.|..|| |.|| ||||| |||||.||
BL00023 1 ATGAAAGCAGCCGATGTCCAGACCGGAAAAAATCCGGCCCTTGTTGTTG- 49
BSNT_04389 39 AGTCATTTTTAAAAAAGAAAAAA--GAAAG-CGC----TTACTAAGCAAG 81
||||||| ||||| ||| ||...|| |||
BL00023 50 ----------------GAAAAAAACGAAAGACGCGTTTTTGGGAA--AAG 81
BSNT_04389 82 CTGAATCAGCAAAAATATTTGTACTTGATGATTTTGCCGGG-GTGTATTT 130
||....||||||||||||||.||.||||||||||||||||| .|| ||||
BL00023 82 CTTCTCCAGCAAAAATATTTATATTTGATGATTTTGCCGGGACTG-ATTT 130
BSNT_04389 131 ATTTTTTGCTTTTTAAGTATGTTCCGATGTGGGGAATTGTGATTGCGTTT 180
||||||||||||||||||||||.|||||||||||.|||||.||.||||||
BL00023 131 ATTTTTTGCTTTTTAAGTATGTGCCGATGTGGGGGATTGTCATAGCGTTT 180
BSNT_04389 181 CAGGATTATCAGCCGTTCCTCGGCATTTTGGGCAGTGAGTGGGTGGGGCT 230
||||||||.||||||||.||||||||...|||.||.||.||||||||..|
BL00023 181 CAGGATTACCAGCCGTTTCTCGGCATAACGGGGAGCGAATGGGTGGGCTT 230
BSNT_04389 231 GAAGCATTTTATCAGGCTGTTTACTGAGCCTACATTTTTTCTCTTGTTAA 280
.|||||||||...|||||||||||.||.||.||.||||||.|..||||.|
BL00023 231 TAAGCATTTTGAAAGGCTGTTTACCGAACCGACGTTTTTTATGCTGTTGA 280
BSNT_04389 281 AAAACACGCTCGTGTTATTTGCTTTGAACCTGGCCATATTTTTCCCGGTG 330
|.||.||..|..|.||.|||..|.|.|||||.|...||||.||.|||.|.
BL00023 281 AGAATACATTGATTTTGTTTTTTCTCAACCTTGTTGTATTCTTTCCGATA 330
BSNT_04389 331 CCGATACTGCTGGCGCTTTTATTGAACGAAGT-----GCGGATTGCTCTC 375
|||||..|..||||||||||||||||.||||| .||.||||
BL00023 331 CCGATTATTTTGGCGCTTTTATTGAATGAAGTCAGAGTCGCATTG----- 375
BSNT_04389 376 TTTAAAAAATTTGTTCAGACGCTGATTTATATCCCGCATTTTATGTCTTG 425
||.|||||.|||||.|||||||||||.|||||.||||||||||||||.||
BL00023 376 TTCAAAAAGTTTGTCCAGACGCTGATCTATATTCCGCATTTTATGTCATG 425
BSNT_04389 426 GGTCATTGTTGTATCACTTTCGTTTGTGCTGTTAACGGTAGACGGAGGCT 475
|||||||||.|||||.|||||.||.||.|||||.||.||.||||||||.|
BL00023 426 GGTCATTGTGGTATCGCTTTCTTTCGTCCTGTTGACTGTTGACGGAGGAT 475
BSNT_04389 476 TGATTAATGAACTGATTGTGTTTTTTGGCGGTGAAAAAATCAATTTTCTG 525
||||.|||||..|.||.|..|..||.|||||.|||||.|||||||||.||
BL00023 476 TGATCAATGAGATTATCGCCTACTTCGGCGGAGAAAAGATCAATTTTTTG 525
BSNT_04389 526 CTGAACGAAGAATGGTTCCGGCCCCTGTATATTCTGCAGGTTATCTGGAG 575
|||||.|||...||||||.||||..||||.|||||.|||||.||||||||
BL00023 526 CTGAATGAAAGCTGGTTCAGGCCGATGTACATTCTTCAGGTCATCTGGAG 575
BSNT_04389 576 GGAAGCGGGCTGGTCGACGATCATTTATCTGGCGGCCATTACAGCGGTTG 625
||||||.|||||||||||||||||.|||.|||||||.||||||||.||.|
BL00023 576 GGAAGCCGGCTGGTCGACGATCATCTATTTGGCGGCGATTACAGCTGTCG 625
BSNT_04389 626 ACCCCCAGCTGTATGAAGCGGCGAAAATGGACGGAGCGGGACGGCTGCGG 675
|.||.|||||.||.||||||||||||||||||||.||....||.|||.||
BL00023 626 ATCCGCAGCTTTACGAAGCGGCGAAAATGGACGGGGCCAATCGCCTGAGG 675
BSNT_04389 676 CAAATGTGGCATATTACGCTTCCCGCCATTAAAAGCGTTATCGTCGTTTT 725
...|||||||||.|.||.||||||||.||.|.||||||.|||||||||||
BL00023 676 AGGATGTGGCATGTCACACTTCCCGCGATCAGAAGCGTCATCGTCGTTTT 725
BSNT_04389 726 GCTGATTTTGAAAATCGGAGACACGCTGGAGCTTGGCTTCGAGCATGTGT 775
||||||.|||||||||||.||.|||||.||.||.|||||.||||||||||
BL00023 726 GCTGATCTTGAAAATCGGCGATACGCTCGAACTCGGCTTTGAGCATGTGT 775
BSNT_04389 776 ATTTGCTGTTAAATGCGACTAACAGGGAAGTGGCGGAAATTTTTGATACG 825
||.||||.||.|||||.||.|||.|.||||||||.|||||.|||||||||
BL00023 776 ATCTGCTTTTGAATGCAACGAACCGCGAAGTGGCCGAAATCTTTGATACG 825
BSNT_04389 826 TATGTTTATACTGCAGGGCTGAAACAGGGCCAATTCAGCTACAGTACAGC 875
|||||.||.||.||.|||.|.||.|||||.||.|||||||||||||||||
BL00023 826 TATGTATACACGGCCGGGTTAAAGCAGGGACAGTTCAGCTACAGTACAGC 875
BSNT_04389 876 AGTCGGCGTATTTAAAGCGGCGGTCGGGCTGATTTTGGTCATGCTAGCGA 925
.|||||..||||||||||.||.|||||.||.|||.|.|||.|..|.||.|
BL00023 876 CGTCGGTTTATTTAAAGCAGCTGTCGGTCTCATTCTTGTCGTATTTGCAA 925
BSNT_04389 926 ATCGTTTGGCGAAGAAATTTGGCGAGGAAGGAATTTATTAA 966
|..|..||||||||||||||||.||.|||||.||.||||||
BL00023 926 ACAGGATGGCGAAGAAATTTGGAGAAGAAGGGATATATTAA 966
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.