Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04418 and BL00015
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:36
# Commandline: needle
# -asequence dna-align/BSNT_04418___ytvB.1.5803.seq
# -bsequence dna-align/BL00015___ytvB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04418___ytvB-BL00015___ytvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04418___ytvB-BL00015___ytvB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04418___ytvB
# 2: BL00015___ytvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 217/340 (63.8%)
# Similarity: 217/340 (63.8%)
# Gaps: 68/340 (20.0%)
# Score: 823.5
#
#
#=======================================
BSNT_04418___ 1 ------------------------------------------ATGGGGAT 8
||||||.|
BL00015___ytv 1 ATGCTGCATCAAGTTTTGGTTGCTTGTTTGATTGGAGGGATTATGGGGGT 50
BSNT_04418___ 9 TCTCGGTCATGTGAAAAAGAGAGGCAGGCTGGAGAAGCCCAGAATGACGA 58
||||||.||.||.|||||.|||||..|.||.|||||.||.||||..||||
BL00015___ytv 51 TCTCGGGCACGTTAAAAAAAGAGGACGACTCGAGAAACCGAGAACAACGA 100
BSNT_04418___ 59 AGCGGTTTATCTACCTTGGATTTTTGGAAGATTGGTTTATCGGCATGACG 108
|.||.||.||.||||||||||||||.||||||....||.||||.|||...
BL00015___ytv 101 AACGATTCATTTACCTTGGATTTTTTGAAGATATTCTTGTCGGAATGGTT 150
BSNT_04418___ 109 GCTTCCATTTTACTTGTATTATCCGCTGACCCCGATTCAGGAATTCAACT 158
|||||.|||||.|||||.|||||.||.||.||.|||||.||||||||.||
BL00015___ytv 151 GCTTCTATTTTGCTTGTTTTATCTGCGGAACCTGATTCGGGAATTCAGCT 200
BSNT_04418___ 159 TGTCATCTTATCCATTATCTCAGGCTACGGCGGTGAAGCTGTTCTCAGAA 208
||||.|.|||||.||.||..|.||||||||||||||||||||..|.||||
BL00015___ytv 201 TGTCGTGTTATCGATCATTGCCGGCTACGGCGGTGAAGCTGTATTGAGAA 250
BSNT_04418___ 209 GTTTTGACTTTGTGAGAGAAC----------TGAACAGCGGCGGCGAACC 248
|.|||||||||||.||||||| ||.||| ||||
BL00015___ytv 251 GCTTTGACTTTGTCAGAGAACAGCAGGCAAATGTACA--------GAAC- 291
BSNT_04418___ 249 GGCCGAGTCCAAACGTCAAACCAAAACTCCACCCGAATAA 288
|||.||||.||||.||||.||||||.|||.|||
BL00015___ytv 292 -------TCCGAACGGCAAAACAAATCTCCACACGATTAA 324
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