Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04422 and BL00014
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:36
# Commandline: needle
# -asequence dna-align/BSNT_04422___yttB.1.5803.seq
# -bsequence dna-align/BL00014___yttB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04422___yttB-BL00014___yttB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04422___yttB-BL00014___yttB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04422___yttB
# 2: BL00014___yttB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1241
# Identity: 858/1241 (69.1%)
# Similarity: 858/1241 (69.1%)
# Gaps: 106/1241 ( 8.5%)
# Score: 2850.0
#
#
#=======================================
BSNT_04422___ 1 ATGCCGCGTGCTCTTAA--AATTTTAGTCATTGGAATGTTTATCAATGTG 48
||||||| ||.|.|.| ..||||.|||||.|||||||||||||||||.
BL00014___ytt 1 ATGCCGC--GCACATTATGGCTTTTGGTCATCGGAATGTTTATCAATGTC 48
BSNT_04422___ 49 ACGGGTGCTTCTTTTTTATGGCCGCTGAATACGATTTATATCCATAATCA 98
|||||.||.|||||||||||||||||||||||.||.|||||||||.|.||
BL00014___ytt 49 ACGGGGGCATCTTTTTTATGGCCGCTGAATACCATCTATATCCATCAGCA 98
BSNT_04422___ 99 TTTAGGAAAGTCGTTAACAATAGCCGGACTTGTCCTGATGCTGAATTCCG 148
|||.|||||||||.|.|||...||||||.||||.|||||||||||.||.|
BL00014___ytt 99 TTTGGGAAAGTCGCTGACAGCGGCCGGATTTGTGCTGATGCTGAACTCAG 148
BSNT_04422___ 149 GCGCCAGTGTGGCT-GGTAATTTATGCGGAGGTTTTTTGTTTGATAAAAT 197
|.||.|.||| ||| ||.||..|.|.|||.||.|.|.|.||.||||||||
BL00014___ytt 149 GGGCAAATGT-GCTGGGCAACCTGTTCGGGGGATATCTATTCGATAAAAT 197
BSNT_04422___ 198 CGGCGGTTTTAAATCGATTATGCTTGGGATAGCCATTACGTTAGCAAGCC 247
||||||.||||||.||.||.|.|||||.||.|..||.|||||.||.||||
BL00014___ytt 198 CGGCGGATTTAAAACGGTTGTTCTTGGAATTGTGATCACGTTTGCGAGCC 247
BSNT_04422___ 248 TGATGGGCCTTGTCTTTTTTCATGATTGG--CCAGCCTATATTGTGCTGC 295
|....|||||.|||||||||||.|||||| |||| ||.|||.|..|..
BL00014___ytt 248 TTTCTGGCCTCGTCTTTTTTCACGATTGGTTCCAG--TACATTCTTTTCT 295
BSNT_04422___ 296 TGACGATTGTGGGCTTTGGCTCCGGTGTTGTTTTTCCGGCCAGCTACGCA 345
|.|||.|.|..||.|||||.||.||..|.|||||||||||..||||.|||
BL00014___ytt 296 TAACGTTGGCCGGTTTTGGATCAGGGATCGTTTTTCCGGCATGCTATGCA 345
BSNT_04422___ 346 ATGGCGGGATCGGTATGGCCTGAAGGGGGAAGGAAGGCATTTAATGCGAT 395
|||||.|||||.||.|||||.|||||.||.||.|||.|.||.||..|..|
BL00014___ytt 346 ATGGCCGGATCAGTTTGGCCGGAAGGCGGCAGAAAGCCGTTCAACTCTGT 395
BSNT_04422___ 396 ATATGTCGCGCAAAACGCGGGTGTGGCTGTCGGTTCAGCGCTTGGCGGTG 445
|||.||.||.|||||.||.||||||||.||.||.||||||||.|||||..
BL00014___ytt 396 ATACGTGGCCCAAAATGCAGGTGTGGCAGTTGGCTCAGCGCTCGGCGGAA 445
BSNT_04422___ 446 TCGTGGCGTCTTTCTCGTTTTCATATGTATTTTTGGCGAATGCCGCGCTG 495
|.||.||.|||||.||.|||.|.|||||.|||.|.||||||||...||||
BL00014___ytt 446 TTGTCGCTTCTTTTTCATTTACGTATGTTTTTCTCGCGAATGCGATGCTG 495
BSNT_04422___ 496 TATCTGGTCTTTTTCTTTATTGTATATTTCGGATTTCGAAA--TATTCAG 543
||....|||||.|||.|.||||..|.|||||||||| ||| .||.|.|
BL00014___ytt 496 TACGCCGTCTTCTTCATGATTGCGTTTTTCGGATTT--AAACGCATCCGG 543
BSNT_04422___ 544 ACGGGAGATGCGTCCCAACCATCCGTGCTTGATTA---CGATGCTGTGAA 590
.|.|.|.|.||....||..||||.||..|.|||.| ||||.|.||.|.
BL00014___ytt 544 TCTGAAAAAGCCATGCAGTCATCTGTTTTGGATCATGCCGATTCAGTCAG 593
BSNT_04422___ 591 CAGCAAAGCAAAATTTGCCGCAC---TGATCAT-TTTAAGCGGAGGCTAT 636
|.|.|||.|.||||||.|.||.| ||.|||| |.||.| |||||.
BL00014___ytt 594 CGGGAAATCGAAATTTTCTGCGCTTTTGGTCATATGTACG----GGCTAC 639
BSNT_04422___ 637 GTACTCGGATGGCTGGCTTATTCTCAGTGGTCAACCACAATTGCTTCGTA 686
.|.|||||.|||.|.||||||||.||.|||||..|.||.||.||||| |
BL00014___ytt 640 CTGCTCGGCTGGATCGCTTATTCGCAATGGTCCTCGACCATCGCTTC--A 687
BSNT_04422___ 687 CACACAAAGCA--TTGGAATATCTCTTTCCTTATACAGCGTGCTGTGGAC 734
||.||..||.| |.||.|||||||||......|||||||||||.|||||
BL00014___ytt 688 CATACCCAGGAGCTGGGGATATCTCTTGGGCAGTACAGCGTGCTTTGGAC 737
BSNT_04422___ 735 GGTTAACGGAATTCTCATTGTGCTCGGCCAGCCGCTCGTCAGTTTTGTGG 784
.||.|||||....|||||.||..||||.||||||||..||.|||||.|.|
BL00014___ytt 738 AGTGAACGGGGCGCTCATCGTTTTCGGTCAGCCGCTGATCGGTTTTTTTG 787
BSNT_04422___ 785 TGAAAAAATGGGCCGAGTCGCT-AAAAGCGCAAATGGTCATCGGCTTTAT 833
|||||...|..|||||.||||| ||||.| |||||.||.|||||.|||.|
BL00014___ytt 788 TGAAACGGTTTGCCGAATCGCTGAAAAAC-CAAATCGTGATCGGATTTGT 836
BSNT_04422___ 834 CATTTTTATTGTGTCTTTCAGCAT--------GCTGCTG-ACTGCAAAGC 874
|||||||||..||.|.|.|.|.|| || |||| ||.|
BL00014___ytt 837 CATTTTTATGATGGCATACGGAATTTTGTTTGGC-GCTGAACGG------ 879
BSNT_04422___ 875 AATTTCCGATGTTTCTCGCAGCGATGGTGATCCTGACGATCGGAGAAATG 924
||||||...|||||.||.||||||||..|.|||||.||.||.||||||
BL00014___ytt 880 --TTTCCGGCTTTTCTTGCTGCGATGGTTGTGCTGACCATTGGCGAAATG 927
BSNT_04422___ 925 CTTGTTTGGCCTGCTGTGCCGACAATTGCCAATCAGCTTGCCCCTAAAGG 974
|||||.|||||.|||||||||||.|||||.||.|..||.||.||.|.|||
BL00014___ytt 928 CTTGTATGGCCGGCTGTGCCGACGATTGCAAACCGTCTCGCACCGAGAGG 977
BSNT_04422___ 975 GAAAGAAGGCTTTTATCAAGGCTTTGTCAACAGTGCGGCGACAGGCGGAA 1024
|||||||||.|||||||||||.||||||||||||..||||||.|||||||
BL00014___ytt 978 GAAAGAAGGGTTTTATCAAGGGTTTGTCAACAGTATGGCGACCGGCGGAA 1027
BSNT_04422___ 1025 GAATGATTGGTCCCCTGTTCGGAGGAGTGCTTGTCGATCATTACGGCATT 1074
|||||||.||.||.||.||.||.|||.||||.||.|||.|||...|.||.
BL00014___ytt 1028 GAATGATCGGACCGCTTTTTGGCGGAATGCTGGTTGATTATTTTAGTATG 1077
BSNT_04422___ 1075 AAGGCCCTTGTTTTATC-----TCTGTTGGTATTGCTGCTGAT--CAGTA 1117
.|| || |||..|| ||||.|.|.|||||||||||| || |
BL00014___ytt 1078 CAG---CT--TTTGCTCGCGGTTCTGCTCGCATTGCTGCTGATTGCA--A 1120
BSNT_04422___ 1118 TTGCCACAACGCTTCTATATGACA--AACGGCTAAAA------------T 1153
|.|..||..||.||.||||..||| ||.| |||| |
BL00014___ytt 1121 TAGGAACGGCGTTTTTATACAACAGGAAGG---AAAAGCAGCTCTCCGCT 1167
BSNT_04422___ 1154 CAGTTAAAGAAACAAATAAGCAGGCATCAATCTCTTCATAA 1194
|||| ||.|| ||||.|
BL00014___ytt 1168 CAGT--------CAGAT------GCATGA------------ 1182
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