Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04432 and BL00011
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04432___ytrE.1.5803.seq
# -bsequence dna-align/BL00011___ytrE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04432___ytrE-BL00011___ytrE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04432___ytrE-BL00011___ytrE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04432___ytrE
# 2: BL00011___ytrE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 711
# Identity: 533/711 (75.0%)
# Similarity: 533/711 (75.0%)
# Gaps: 27/711 ( 3.8%)
# Score: 1895.5
#
#
#=======================================
BSNT_04432___ 1 ATGATTGATGTTCAGCATATCGACCATTC-TTTCACGATCGGAAAAAAGG 49
|||||...|||..|||||||..||||.|| |||.|.| ||||.|||||||
BL00011___ytr 1 ATGATCAGTGTAAAGCATATTCACCACTCGTTTAAAG-TCGGCAAAAAGG 49
BSNT_04432___ 50 GCCGTGAGAATGAAGTTCCAGTATTGAAGGATGTTTC-ATTACGTGTGGC 98
|..|.||.||||||.||...||.||.|||||.||.|| .|||| .||.|.
BL00011___ytr 50 GAAGGGAAAATGAAATTAAGGTGTTAAAGGACGTCTCGCTTAC-CGTTGA 98
BSNT_04432___ 99 GAAAGGTGAGATCGCCTGTATTGTCGGGCGAAGCGGCTCAGGGAAATCAA 148
.|||||.||.|||||||||||||||||.||.||||||||.||.||.||.|
BL00011___ytr 99 AAAAGGAGAAATCGCCTGTATTGTCGGACGGAGCGGCTCCGGAAAGTCGA 148
BSNT_04432___ 149 CGCTTTTGAATTTGATTTCCGGCTACATATCGCCGACAAAAGGGCGGATT 198
|.||..||||.|||||||||||||||||..|.||||||||||||..|||.
BL00011___ytr 149 CACTGCTGAACTTGATTTCCGGCTACATCGCCCCGACAAAAGGGAAGATC 198
BSNT_04432___ 199 GTCATTAATGGCACTGATGTTACGGGGTTTAATGAAAAGGAATGGG-CGC 247
.|.|||.|.|||||.|||||.|||..||..|..||.||.||||||| |||
BL00011___ytr 199 ATGATTGACGGCACGGATGTCACGAAGTACAGCGAGAAAGAATGGGCCGC 248
BSNT_04432___ 248 AATTTC-GGCTTGACCATTTTGGTTTTATTTTCCAAAGTTTTCAGCTCAT 296
| ||| |||||||.|||||.||.||.||.||.||||||||||||||.||
BL00011___ytr 249 A--TTCAGGCTTGAACATTTCGGCTTCATCTTTCAAAGTTTTCAGCTGAT 296
BSNT_04432___ 297 CCCGGGTTTAACGACGTATGAGAATGTTGAAATGCCGCTGGCGTTAAAAG 346
.|||.|.||.|||||.|..||.|||.|.|||.|.||.|||.|.|||||||
BL00011___ytr 297 TCCGAGCTTGACGACTTTCGAAAATATCGAACTTCCCCTGACTTTAAAAG 346
BSNT_04432___ 347 G-GATCAAGCCCTCTGAGCGGAAGCAAAAGGTGC----AGGACATGCTGA 391
| |.|| |.||.||.||||||||||| |.|| |.||.|||.|..
BL00011___ytr 347 GTGTTC-ATCCGTCGGAGCGGAAGCA----GCGCGTCAACGAGATGTTCC 391
BSNT_04432___ 392 AACGCGTCGGTCTGGAAAACCACGCCGCTCATTATCCGAATGAACTGTCA 441
|.||||||||.||.|||||||||||||..||.|||||||||||.||.|||
BL00011___ytr 392 ACCGCGTCGGCCTTGAAAACCACGCCGGCCACTATCCGAATGAGCTTTCA 441
BSNT_04432___ 442 GGCGGCCAGCAGCAGCGTGTCAGTATTGCTCGAGCATTGATTTTAAATCC 491
|||||.|||||||||||.|||||.||.||.||.||.||||||||.|||||
BL00011___ytr 442 GGCGGACAGCAGCAGCGCGTCAGCATCGCCCGCGCTTTGATTTTGAATCC 491
BSNT_04432___ 492 TTCGATTATCTTAGCGGATGAGCCGACGGGAAGCCTTGATTCAGAAACGG 541
|||.||.||.|||||.||.||||||||.||||||||.|||||.|||||.|
BL00011___ytr 492 TTCAATCATTTTAGCCGACGAGCCGACCGGAAGCCTGGATTCCGAAACAG 541
BSNT_04432___ 542 AACATGAAGTGCTGGAATTGATCCAGCAGCTGAATCGTGAGCGTGGCATT 591
|.||.|||.|.||.|||||.||.|.|||||||||..|.||.||.||||||
BL00011___ytr 542 AGCAGGAAATCCTTGAATTCATTCGGCAGCTGAACAGGGAACGCGGCATT 591
BSNT_04432___ 592 ACATTTGTGATCATTACTCACGATGATGAAGTCGCTTCTATCGGACATTC 641
||||||||.|||||.||.||||||||.||.||.||.||.||||...||.|
BL00011___ytr 592 ACATTTGTCATCATCACGCACGATGACGAGGTGGCATCGATCGCCAATAC 641
BSNT_04432___ 642 AAAATTTCAGCTTCA--TGATGGTGTGCTA---AAAGGAGGAA-TTACCG 685
.|||||||| ||.| |||.||.|||.|| ||||| |||| ..||.|
BL00011___ytr 642 GAAATTTCA--TTTATCTGACGGCGTGTTAGAGAAAGG-GGAAGAGACTG 688
BSNT_04432___ 686 TTGAGGTTTAA 696
||||.||||||
BL00011___ytr 689 TTGAAGTTTAA 699
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