Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04442 and BL00005
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04442___ytpB.1.5803.seq
# -bsequence dna-align/BL00005___ytpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04442___ytpB-BL00005___ytpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04442___ytpB-BL00005___ytpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04442___ytpB
# 2: BL00005___ytpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1132
# Identity: 830/1132 (73.3%)
# Similarity: 830/1132 (73.3%)
# Gaps: 77/1132 ( 6.8%)
# Score: 3043.0
#
#
#=======================================
BSNT_04442___ 1 GTGTTGACAGTACCGGAACATCCTTTTGGATTGATGGCAAAGGTATATCG 50
|||.||||||||||.||||||||||||||.|||||.||.|||||..|
BL00005___ytp 1 ---TTGGCAGTACCGGAGCATCCTTTTGGATTAATGGCTAAAGTATACAG 47
BSNT_04442___ 51 AGATATTTTTCCGCTCGTTCATCAAGAGCTGGACATATGGAAGCAAAAAT 100
|||..|||||||.||.||||||||.||..||||||..|||||.|.||||.
BL00005___ytp 48 AGAGGTTTTTCCCCTTGTTCATCAGGAATTGGACAAGTGGAAACGAAAAG 97
BSNT_04442___ 101 CAGAATCGATTCATAACAGTGAATTGAAAGCACAGGCAACCGCAAGTATT 150
|.|||.|||||||.||....|||.|||||.|.|||||.|..||.||.||.
BL00005___ytp 98 CTGAAACGATTCAAAATCCCGAACTGAAAACGCAGGCGAAAGCCAGCATC 147
BSNT_04442___ 151 CGGGACAAAACGTTTCACTGTGAAGGCGGCGGCATACTGG-CCTTATTGT 199
.||||.|||||.|||||||||||||||||||||||..||| ||||.|| |
BL00005___ytp 148 AGGGATAAAACCTTTCACTGTGAAGGCGGCGGCATTATGGCCCTTCTT-T 196
BSNT_04442___ 200 CAGGCAGCCAAAAAC-AGAAATGTGTCGA----GTTTATCATCGCGTATC 244
|||| ||.|||||.| ||.| ||||| ||||||.|..|||||||
BL00005___ytp 197 CAGG-AGACAAAATCGAGCA----GTCGATCCGGTTTATTACGGCGTATC 241
BSNT_04442___ 245 AAACGATTAGTGATTATTTGGACAATCTGTGTGACCGCAGCACCTCGCTG 294
|.|||||.||.||.||..|.||||||||.||.|||||.|||||||||||.
BL00005___ytp 242 AGACGATAAGCGACTACCTCGACAATCTATGCGACCGGAGCACCTCGCTT 291
BSNT_04442___ 295 GACCCGCAGGATTTTCGGATGCTCCATGCCTCA-------ATGCAGGATG 337
||.|||.|.||||| |.||||||.||| |||.|.||.|
BL00005___ytp 292 GATCCGGATGATTT-------CACCATGCTTCACCAGTCGATGAAAGACG 334
BSNT_04442___ 338 CACTGACAGTTGGGGCGGAACTGCAAAACTATTATCAATTCAGGGAAGAA 387
|.||||||||.|||||.|||.||.||||||||||.|..|||||||||||.
BL00005___ytp 335 CGCTGACAGTCGGGGCTGAATTGAAAAACTATTACCGGTTCAGGGAAGAT 384
BSNT_04442___ 388 CAGGATGA-CAGCGGATATCTGCACGAACTGGTCAAAACGTGCCA--GCG 434
|||||||| || .||.|||.|||||||..|.||.|||||.||.|| |||
BL00005___ytp 385 CAGGATGATCA-AGGCTATTTGCACGACTTAGTGAAAACATGTCAAGGCG 433
BSNT_04442___ 435 TGTCCTTGGTTCC----ATTGAGCACTATGACATGATTAA--ACCTTATC 478
|| |||| | ||||||.|||||||..||||.|| |.| |||
BL00005___ytp 434 TG--CTTG----CGGAAATTGAGAACTATGATCTGATCAAGGAGC--ATC 475
BSNT_04442___ 479 TGCTTGAACTGTGCGGCTATTATTGCGATTTGCAGGTGCATAAGCACGTT 528
||.||||.||.|||.||||.||||||||..||||.||.|||||.|||||.
BL00005___ytp 476 TGATTGAGCTTTGCAGCTACTATTGCGACCTGCAAGTTCATAAACACGTA 525
BSNT_04442___ 529 ATTGAGCATGAGCGTGTTCCGCGGCTTGAAAAGTGGTTTACTCAATATGA 578
.|.|||||||||||||||||.|||||.|||..|||||||....|.|||.|
BL00005___ytp 526 GTGGAGCATGAGCGTGTTCCCCGGCTCGAAGCGTGGTTTGAGAATTATAA 575
BSNT_04442___ 579 ATCAGAGCTGCCTGAGATGGAATGGTATGAATTTTCAGCCTGTGCAGGCT 628
|||.|..|||||..|.||||||||||||||.||.||.||||||||.||.|
BL00005___ytp 576 ATCGGCTCTGCCGAAAATGGAATGGTATGAGTTCTCGGCCTGTGCGGGTT 625
BSNT_04442___ 629 CAACGTTAGGCATTTTCTGTCTGGTTGCGTATTCGTTCCAGCCTGATTTC 678
|||||.|.|||||.|||||.||.||..|||||||..|||..||.|||||.
BL00005___ytp 626 CAACGCTCGGCATCTTCTGCCTCGTATCGTATTCCGTCCGTCCCGATTTT 675
BSNT_04442___ 679 ACAGAAAGCACCGCTAAAAAAATCCGCGACAGTTATTTTCCTTACATACA 728
||.|||...|..||...|||.|||||||||||.||||||||.||||||||
BL00005___ytp 676 ACTGAATCGATGGCCGGAAAGATCCGCGACAGCTATTTTCCGTACATACA 725
BSNT_04442___ 729 GGGCCTTCATATCCTGCTTGATTATTTGATTGATCAAGAGGAGGACTTGC 778
|||.||.||.||||||||.||||||||.|||||.||.|||||.||.||..
BL00005___ytp 726 GGGACTGCACATCCTGCTCGATTATTTAATTGACCAGGAGGAAGATTTAA 775
BSNT_04442___ 779 TGGAAGGAGACTTGAATTTCTGCTCATATTATCAGTCTCATGAAGAGATG 828
|.|..||.||.||||||||||||.|.|||||.|..||.|||..|||.|||
BL00005___ytp 776 TCGGCGGGGATTTGAATTTCTGCACTTATTACCCATCACATTCAGATATG 825
BSNT_04442___ 829 ATGAATCGGCTTGAACACTTTATCCATAAAGCCGACGAGCATTTACAAGG 878
|||.|..||||.|||.|.||.|||.|.|..||.||.||.|||||.|..||
BL00005___ytp 826 ATGGAAAGGCTCGAATATTTCATCGAAATGGCGGATGAACATTTGCGCGG 875
BSNT_04442___ 879 CATTCCGCATGAAAACTTCCATCGTTTAATCAATCGCGGCTTGCTTGGTG 928
.||||||||.||||||||.||.|||||.|||||..|.||..||.|.||.|
BL00005___ytp 876 GATTCCGCACGAAAACTTTCACCGTTTGATCAACAGAGGACTGTTAGGCG 925
BSNT_04442___ 929 TTTATTTGTCAGATGATAAAGTGGCAGGCCAAAAGGAAATGGGCCGGCTC 978
||||||||||.|||||.|||||.||.|||||.||||||||.||||||||.
BL00005___ytp 926 TTTATTTGTCGGATGACAAAGTAGCGGGCCAGAAGGAAATCGGCCGGCTT 975
BSNT_04442___ 979 GCAAAGAAGCTGATCAAAGCCAGCGGAAAAACCTCCCTTTTCTTT---TA 1025
||.||.||||||||.|||||.|||||.|||||.|| ||||||| ||
BL00005___ytp 976 GCGAAAAAGCTGATTAAAGCGAGCGGCAAAACATC---TTTCTTTTTCTA 1022
BSNT_04442___ 1026 TATCAACGGCAGAGCCTACCGGAAATTTCAAAAAATGTCCTGGATGAAAA 1075
|||.||||||||.||.|||||.|||.|||||||||||.|.||||||||||
BL00005___ytp 1023 TATTAACGGCAGGGCATACCGCAAAATTCAAAAAATGCCGTGGATGAAAA 1072
BSNT_04442___ 1076 ACTCAAAGAAAAAAGCTCAAATCATTTGCTGA 1107
.||| |.||
BL00005___ytp 1073 GCTC---GTAA--------------------- 1080
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