Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04447 and BL00002
See
Amino acid alignment /
Visit
BSNT_04447 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_04447___asnB.1.5803.seq
# -bsequence dna-align/BL00002___asnB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04447___asnB-BL00002___asnB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04447___asnB-BL00002___asnB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04447___asnB
# 2: BL00002___asnB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1938
# Identity: 1496/1938 (77.2%)
# Similarity: 1496/1938 (77.2%)
# Gaps: 78/1938 ( 4.0%)
# Score: 5690.5
#
#
#=======================================
BSNT_04447___ 1 ATGTGTGGATTTGTCGGGGTTTTTAA-------CAAGCATCCGTTAGCTC 43
||||||||||||||.|||||.||.|| |.|.||||||
BL00002___asn 1 ATGTGTGGATTTGTAGGGGTATTCAATCATCGCCCATCATCCG------- 43
BSNT_04447___ 44 AAACCGCTGATCAAGAAGAACTAATCAAACAAATGAACCAAATGATCGTT 93
|.||.||.|..||.||||||||.||.|||||||||||..|||||||.||.
BL00002___asn 44 AGACAGCAGCACAGGAAGAACTGATTAAACAAATGAATGAAATGATTGTA 93
BSNT_04447___ 94 CACCGCGGTCCTGACAGTGATGGATATTTCCATGATGAGCACGTCGGCTT 143
|||||||||||.|||..||||||.||.|..|||||||||||.||.|||||
BL00002___asn 94 CACCGCGGTCCGGACGATGATGGGTACTATCATGATGAGCATGTAGGCTT 143
BSNT_04447___ 144 CGGATTCAGACGGCTCAGCATTATTGATGTAGAAAATGGCGGACAGCCTT 193
||||||.|||.||||||||||.||.|||||.||||||||.|||||||||.
BL00002___asn 144 CGGATTTAGAAGGCTCAGCATCATCGATGTGGAAAATGGAGGACAGCCTC 193
BSNT_04447___ 194 TATCATATGAAGATGAAACATATTGGATTATCTTTAACGGAGAAATCTAT 243
|.||.||||||||.||..|.|||||||||||.|||||.||||||||||||
BL00002___asn 194 TGTCTTATGAAGACGACTCCTATTGGATTATTTTTAATGGAGAAATCTAT 243
BSNT_04447___ 244 AACTATATCGAACTGAGAGAAGAACTTGAAGCAAAGGGGTACACATTCAA 293
||||||||.|||||||.|||.||||||....|.||.||.|||...|||||
BL00002___asn 244 AACTATATAGAACTGAAAGACGAACTTCTTTCTAAAGGATACGAGTTCAA 293
BSNT_04447___ 294 CACGGATTCGGACACAGAGGTTCTTCTTGCGACTTACCGTCACTATAAAG 343
.||.|||||.||.||.||.|||.|.||||||||||||||.|||||.|||.
BL00002___asn 294 AACCGATTCAGATACGGAAGTTTTGCTTGCGACTTACCGCCACTACAAAC 343
BSNT_04447___ 344 AAGAAGCGGCGTCCAAACTGCGCGGTATGTTTGCCTTTCTGATTTGGAAT 393
|.|||||.||.||.||.|||||||||||||||||.|||.|.||.|||.||
BL00002___asn 344 AGGAAGCCGCTTCAAAGCTGCGCGGTATGTTTGCTTTTTTAATCTGGGAT 393
BSNT_04447___ 394 AAAAACGATCATGTGCTTTATGGGGCAAGAGATCCATTCGGCATTAAACC 443
|||||.||.||..|.||.||.||.||..|.|||||.|||||||||||.||
BL00002___asn 394 AAAAAAGAGCAGCTTCTATACGGAGCGCGCGATCCGTTCGGCATTAAGCC 443
BSNT_04447___ 444 GTTGTATTACAC---AACGATCAATGATCAGGTTTATTTTGCCTCAGAGA 490
|.|.||||..|| |||| .|.|..||.|||||||||||.|||||.|
BL00002___asn 444 GCTCTATTTTACGAAAACG---GACGGCCACGTTTATTTTGCGTCAGAAA 490
BSNT_04447___ 491 GAAAAAGTTTAATGGTTGCTCAGAATGAT--ATTGAAATAG-ATAAAGAG 537
||||.||..|.||||.|| || .|||.| .|||.|||.| ||.||.|.
BL00002___asn 491 GAAAGAGCCTGATGGCTG-TC--GATGCTGACTTGGAATTGAATGAAAAA 537
BSNT_04447___ 538 GCATTGCAGCAGTACATGTCTTTCCAATTTGTTCCTGAACC-AAGCACGC 586
||..|.||||||||.|..||.||||||||.|||||.||.|| .|| ||||
BL00002___asn 538 GCGCTTCAGCAGTATACATCGTTCCAATTCGTTCCGGAGCCTGAG-ACGC 586
BSNT_04447___ 587 TTGATGCCC----ATGTGAAAAAAGTAGAGCCGGGTTCA-CAGTTCACAA 631
|.|| | |.|||.|||||||||||.|||| .|| |||||.||..
BL00002___asn 587 TGGA----CAAAAAGGTGCAAAAAGTAGAGTCGGG-CCATCAGTTTACCG 631
BSNT_04447___ 632 TCCGCCCGGACGGCGATA-TCACATTCAAAACGTATTTCAAAGCGAACTT 680
|||||||||..|..|||| ||| |||.|||||.||.|..||||...|.||
BL00002___asn 632 TCCGCCCGGGTGAGGATATTCA-ATTTAAAACATACTGGAAAGTTCAATT 680
BSNT_04447___ 681 CAAGCCGGTTCAGACTGAAGAAGACAAGCTTGTGAAAGAAGTCCGAGACG 730
|||||||||||||||.|||||||||||||||||..|.|||||..||||||
BL00002___asn 681 CAAGCCGGTTCAGACAGAAGAAGACAAGCTTGTTCAGGAAGTAAGAGACG 730
BSNT_04447___ 731 CGATCTATGACTCTGTAAACGTTCATATGAGAAGTGACGTTCCTGTCGGT 780
||||||.|||.||||||||.|||||||||.||||.||.||.|||||.|||
BL00002___asn 731 CGATCTTTGATTCTGTAAAAGTTCATATGCGAAGCGATGTGCCTGTAGGT 780
BSNT_04447___ 781 TCGTTCCTGTCTGGCGGGATTGATTCTTCCTTTATTGTGTCTGTTGCGAA 830
||.|||||.||.||.||.|||||.||.||||||||.|||||.||.|||||
BL00002___asn 781 TCCTTCCTTTCCGGGGGCATTGACTCGTCCTTTATCGTGTCAGTGGCGAA 830
BSNT_04447___ 831 GGAATTTCATCCAAGCTTAAAAACATTCTCTGTCGGCTTTGAACAGCAGG 880
|.||||.|||||.|.||||||.||.||||||||||||||||||||..|.|
BL00002___asn 831 GCAATTCCATCCCAACTTAAAGACGTTCTCTGTCGGCTTTGAACATGAAG 880
BSNT_04447___ 881 GCTTCAGTGAGGTTGATGTAGCGAAAGAAACGGCAGCGGCGCTG------ 924
|||||||.||.|||||.||.||||||||||| |||||
BL00002___asn 881 GCTTCAGCGAAGTTGACGTTGCGAAAGAAAC--------CGCTGATAAGG 922
BSNT_04447___ 925 --GGCATTGAAAATATCAGCAAAGTCATTTCGCCTGAGGAATACATGAAT 972
|||.|.|||||..|||||....|||||||.|||||||||||.|||||.
BL00002___asn 923 TCGGCGTGGAAAACTTCAGCGCGATCATTTCCCCTGAGGAATATATGAAC 972
BSNT_04447___ 973 GAGCTTCCGAAGATCGTTTGGCATTTTGATGACCCGCTTGCTGATCCGGC 1022
||||||||.||||||||.||||||.|.|||||.||.||.||.||.||.||
BL00002___asn 973 GAGCTTCCAAAGATCGTCTGGCATCTGGATGATCCTCTGGCAGACCCTGC 1022
BSNT_04447___ 1023 AGCGATTCCGTTGTACTTTGTTGCAAAAGAAGCGAAAAAACATGTTACGG 1072
.||||||||.|||||.|||||.||.||.||||||||.||.||.|||||||
BL00002___asn 1023 TGCGATTCCTTTGTATTTTGTCGCGAAGGAAGCGAAGAAGCAAGTTACGG 1072
BSNT_04447___ 1073 TTGCTTTATCAGGTGAAGGAGCGGATGAGCTCTTCGGCGGATATAACATT 1122
|||.|||.|||||.|||||.||.||||||||.||||||||.||.||.|||
BL00002___asn 1073 TTGTTTTGTCAGGAGAAGGGGCAGATGAGCTGTTCGGCGGTTACAATATT 1122
BSNT_04447___ 1123 TACCGTGAACCGCTTTCGCTTAAA-CCGTTTGAACGGATTCCGT-CCGGC 1170
|||||.||.|||||||| .||||| ||||||||.|||||.|||| ||.||
BL00002___asn 1123 TACCGAGAGCCGCTTTC-ATTAAAGCCGTTTGAGCGGATCCCGTCCCCGC 1171
BSNT_04447___ 1171 TTGAAAAAGATGCTTCTGCACGTTGCTGCCGTTATGCCTGAAGGTATGAG 1220
||||||||||||||||||.|||.|||.|.|..|||||.|||||.||||.
BL00002___asn 1172 -TGAAAAAGATGCTTCTGCGCGTAGCTTCAGCGATGCCGGAAGGAATGAA 1220
BSNT_04447___ 1221 AGGAAAGAGCCTGCTTGA--GCGCGGCTGTACTCCGCTTCAGGATCGTTA 1268
|||.||.|||.| ||.| |.|.|||||||||||.|||.|.|||.|.||
BL00002___asn 1221 AGGGAAAAGCTT--TTTAATGAGGGGCTGTACTCCTCTTGAAGATAGATA 1268
BSNT_04447___ 1269 TATCGGTAACGCGAAAATCTTTGAAGA--GTCTG---TCAAAAAGCAGCT 1313
||||||.||.||.||.||.|||||||| |..|| |||||| ||
BL00002___asn 1269 TATCGGCAATGCAAAGATTTTTGAAGAAGGCATGAAATCAAAA-----CT 1313
BSNT_04447___ 1314 GTTGAAGCATTATAATCCG-AACCTTTCATATCGCGATGTGACGAAGACT 1362
..|....||.|||.| |.| |||||.||.||..|.||.|||||.|||.|.
BL00002___asn 1314 TCTTCGCCAATATGA-CAGCAACCTGTCTTACTGTGACGTGACAAAGCCA 1362
BSNT_04447___ 1363 TACTTTACAGAAAGCAGCTCGTACAGCGATATCAACAAAATGCAGTATGT 1412
||.|||..|||||||||.||.||||||||.|||||.||||||||||||||
BL00002___asn 1363 TATTTTGAAGAAAGCAGGTCCTACAGCGAAATCAATAAAATGCAGTATGT 1412
BSNT_04447___ 1413 CGATATCCACACTTGGATGCGCGGCGACATTTTGTTAAAGGCGGATAAAA 1462
||||||||||||.|||.||||||||||.||||||.|.|||||.||.||||
BL00002___asn 1413 CGATATCCACACATGGCTGCGCGGCGATATTTTGCTGAAGGCCGACAAAA 1462
BSNT_04447___ 1463 TGACGATGGCGAATTCTTTGGAACTGCGTGTGCCGTTCTTGGATAAAGTC 1512
||||||||||.|||||..||||.||.||.||.|||||.|||||.||||||
BL00002___asn 1463 TGACGATGGCCAATTCGCTGGAGCTTCGCGTTCCGTTTTTGGACAAAGTC 1512
BSNT_04447___ 1513 GTATTCGACGTCGCTTCAAAAATTCCTGATGAGCTGAAAACGAAGAACGG 1562
|||||.||.|..|||||.||||||||.||.||||||||||||||.|||||
BL00002___asn 1513 GTATTTGAAGCGGCTTCCAAAATTCCCGAAGAGCTGAAAACGAAAAACGG 1562
BSNT_04447___ 1563 CACGACGAAGTATCTTCTTCGCAAAGCCGCTGAAGGAATTGTGCCTGAGC 1612
||||||.||.|||||||||.|.|||||.||.|||||.||.||.||.||.|
BL00002___asn 1563 CACGACAAAATATCTTCTTAGAAAAGCGGCGGAAGGCATCGTTCCAGAAC 1612
BSNT_04447___ 1613 ACGTATTAAACCGCAAAAAGCTTGGTTTCCCTGTACCGATCCGTCATTGG 1662
||||..|||||||||||||.||.||.||||||||.||.|||||.||.|||
BL00002___asn 1613 ACGTGCTAAACCGCAAAAAACTAGGGTTCCCTGTGCCAATCCGCCACTGG 1662
BSNT_04447___ 1663 CTGAAAAACGAAATGAACGAATGGGTGCG-GAATATTATTCAAGAAAGCC 1711
|||||||||||||||.|.||.|||| .|| |||.||.|||.||||.|||.
BL00002___asn 1663 CTGAAAAACGAAATGCATGACTGGG-CCGTGAACATCATTAAAGAGAGCG 1711
BSNT_04447___ 1712 AAACGGATGCTTATATCCATAAGGATTATGTCCTTCAGCTTCTTGAAGAC 1761
|.||.|||||.|||||||||||.|||||.||.||||||||||||||||||
BL00002___asn 1712 AGACAGATGCATATATCCATAAAGATTACGTGCTTCAGCTTCTTGAAGAC 1761
BSNT_04447___ 1762 CATTGTGCGGACAAGGCTGATAACAGCCGTAAAATTTGGACTGTGCTAAT 1811
||.||.||..||||.||.|||||||||||.|||||.|||||.||.||.||
BL00002___asn 1762 CACTGCGCCAACAAAGCGGATAACAGCCGCAAAATCTGGACGGTTCTCAT 1811
BSNT_04447___ 1812 CTTTATGATCTGGCACAGCATCAATATTGAAAAACGGTATATGCCTGAAG 1861
|||||||||||||||||||||.....||||||||||.|.|.|.||.||||
BL00002___asn 1812 CTTTATGATCTGGCACAGCATTTTCGTTGAAAAACGCTTTGTACCGGAAG 1861
BSNT_04447___ 1862 AGCTGAGCCATCAGCCTAAAGAAGTCATCTTTGTGTAA 1899
||||||.|||||||||.|||||.|||||..||||.|||
BL00002___asn 1862 AGCTGAACCATCAGCCAAAAGAGGTCATTATTGTTTAA 1899
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.